EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000022185 (Gene tree)
Gene ID
112144310
Gene Symbol
-
Alias
-
Full Name
poly(U)-binding-splicing factor PUF60-like
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Minus strand
Length
6480 bases
Position
chrNVQA01000008.1:1256877-1263356
Accession
112144310
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000020305RRM_1PF00076.224.2e-4312
ENSOMEP00000020305RRM_1PF00076.224.2e-4322
ENSOMEP00000035142RRM_1PF00076.224.4e-4312
ENSOMEP00000035142RRM_1PF00076.224.4e-4322
ENSOMEP00000035129RRM_1PF00076.224.9e-4312
ENSOMEP00000035129RRM_1PF00076.224.9e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000036044-1554-ENSOMEP00000020305517 (aa)--
ENSOMET00000036057-1905-ENSOMEP00000035129534 (aa)--
ENSOMET00000029799-1569-ENSOMEP00000035142522 (aa)XP_024124564UPI000CF7CFAB
Gene Model
Click here to download ENSOMEG00000022185's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022185's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000022185-9978.253ENSOMEG00000001643puf60b9980.972
ENSOMEG00000022185-5638.235ENSOMEG00000011386u2af2a7040.196
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000022185-9978.947ENSG00000179950PUF609980.357Homo_sapiens
ENSOMEG00000022185-9982.163ENSAPOG00000001713puf60b9982.163Acanthochromis_polyacanthus
ENSOMEG00000022185-9877.567ENSAMEG00000006406PUF609377.609Ailuropoda_melanoleuca
ENSOMEG00000022185-9884.540ENSACIG00000003263-9983.852Amphilophus_citrinellus
ENSOMEG00000022185-9782.685ENSACIG00000021705puf60b9982.685Amphilophus_citrinellus
ENSOMEG00000022185-9991.379ENSAOCG00000015558-9991.379Amphiprion_ocellaris
ENSOMEG00000022185-9982.163ENSAOCG00000005395puf60b9982.879Amphiprion_ocellaris
ENSOMEG00000022185-9780.000ENSAPEG00000011923puf60b9980.000Amphiprion_percula
ENSOMEG00000022185-9581.928ENSAPEG00000001836-9982.635Amphiprion_percula
ENSOMEG00000022185-9990.649ENSATEG00000006303-9990.038Anabas_testudineus
ENSOMEG00000022185-9981.973ENSATEG00000001730puf60b9982.286Anabas_testudineus
ENSOMEG00000022185-9880.076ENSAPLG00000010150PUF609980.076Anas_platyrhynchos
ENSOMEG00000022185-9779.771ENSACAG00000001645PUF609679.771Anolis_carolinensis
ENSOMEG00000022185-9978.947ENSANAG00000018626PUF609980.230Aotus_nancymaae
ENSOMEG00000022185-9782.685ENSACLG00000004462puf60b9982.897Astatotilapia_calliptera
ENSOMEG00000022185-9775.947ENSAMXG00000041030puf60b9976.136Astyanax_mexicanus
ENSOMEG00000022185-9883.144ENSAMXG00000036570puf60a9784.127Astyanax_mexicanus
ENSOMEG00000022185-9979.323ENSBTAG00000037493PUF609979.886Bos_taurus
ENSOMEG00000022185-7951.203WBGene00004389rnp-69050.649Caenorhabditis_elegans
ENSOMEG00000022185-9978.947ENSCJAG00000021485PUF609978.947Callithrix_jacchus
ENSOMEG00000022185-9879.317ENSCAFG00000001400PUF609379.843Canis_familiaris
ENSOMEG00000022185-9979.135ENSCAFG00020018754PUF609979.135Canis_lupus_dingo
ENSOMEG00000022185-9879.886ENSCHIG00000001618PUF608779.924Capra_hircus
ENSOMEG00000022185-9979.135ENSTSYG00000011912PUF609980.422Carlito_syrichta
ENSOMEG00000022185-9875.141ENSCPOG00000014613PUF609475.188Cavia_porcellus
ENSOMEG00000022185-9978.947ENSCCAG00000007744PUF609978.947Cebus_capucinus
ENSOMEG00000022185-9978.947ENSCATG00000035405PUF609978.947Cercocebus_atys
ENSOMEG00000022185-9879.696ENSCLAG00000009154PUF609379.735Chinchilla_lanigera
ENSOMEG00000022185-9780.230ENSCSAG00000008878PUF609980.230Chlorocebus_sabaeus
ENSOMEG00000022185-9780.422ENSCPBG00000005595PUF609979.434Chrysemys_picta_bellii
ENSOMEG00000022185-5961.321ENSCING00000002156-8761.635Ciona_intestinalis
ENSOMEG00000022185-9549.012ENSCING00000008436-9548.924Ciona_intestinalis
ENSOMEG00000022185-9447.571ENSCSAVG00000004765-9749.896Ciona_savignyi
ENSOMEG00000022185-9553.372ENSCSAVG00000001385-9954.231Ciona_savignyi
ENSOMEG00000022185-7980.142ENSCANG00000041843PUF6010080.142Colobus_angolensis_palliatus
ENSOMEG00000022185-9879.886ENSCGRG00001017442Puf609379.924Cricetulus_griseus_chok1gshd
ENSOMEG00000022185-9879.886ENSCGRG00000003717Puf609379.924Cricetulus_griseus_crigri
ENSOMEG00000022185-9682.000ENSCSEG00000014845-9082.635Cynoglossus_semilaevis
ENSOMEG00000022185-9982.342ENSCSEG00000019887puf60b9382.342Cynoglossus_semilaevis
ENSOMEG00000022185-9781.712ENSCVAG00000009386puf60b9982.093Cyprinodon_variegatus
ENSOMEG00000022185-9891.540ENSCVAG00000001560-9791.757Cyprinodon_variegatus
ENSOMEG00000022185-9882.375ENSDARG00000032175puf60a10088.235Danio_rerio
ENSOMEG00000022185-9876.281ENSDARG00000001241puf60b10088.889Danio_rerio
ENSOMEG00000022185-9567.451ENSDNOG00000043278PUF609067.451Dasypus_novemcinctus
ENSOMEG00000022185-9879.696ENSDORG00000004585Puf609579.843Dipodomys_ordii
ENSOMEG00000022185-8762.583FBgn0028577hfp7961.022Drosophila_melanogaster
ENSOMEG00000022185-9759.556ENSEBUG00000014291puf60b8464.035Eptatretus_burgeri
ENSOMEG00000022185-9567.000ENSEBUG00000005470-9366.667Eptatretus_burgeri
ENSOMEG00000022185-9979.135ENSEASG00005009695PUF609979.135Equus_asinus_asinus
ENSOMEG00000022185-9979.135ENSECAG00000024681PUF609879.135Equus_caballus
ENSOMEG00000022185-9984.528ENSELUG00000018443-10085.060Esox_lucius
ENSOMEG00000022185-9980.705ENSELUG00000006507puf60b9978.755Esox_lucius
ENSOMEG00000022185-9979.323ENSFCAG00000001045PUF609980.614Felis_catus
ENSOMEG00000022185-9870.778ENSFALG00000001136PUF609871.023Ficedula_albicollis
ENSOMEG00000022185-9879.886ENSFDAG00000017177PUF609379.924Fukomys_damarensis
ENSOMEG00000022185-9981.784ENSFHEG00000020046puf60b9982.897Fundulus_heteroclitus
ENSOMEG00000022185-9391.942ENSFHEG00000021687PUF6010092.227Fundulus_heteroclitus
ENSOMEG00000022185-9868.571ENSGMOG00000006392puf60b9968.571Gadus_morhua
ENSOMEG00000022185-6584.348ENSGALG00000039901PUF609484.348Gallus_gallus
ENSOMEG00000022185-9887.230ENSGAFG00000004334-10086.275Gambusia_affinis
ENSOMEG00000022185-9981.784ENSGAFG00000021040puf60b9982.685Gambusia_affinis
ENSOMEG00000022185-9975.332ENSGACG00000001484-9876.707Gasterosteus_aculeatus
ENSOMEG00000022185-9970.778ENSGACG00000004717puf60b9970.095Gasterosteus_aculeatus
ENSOMEG00000022185-9879.962ENSGAGG00000013289PUF609279.886Gopherus_agassizii
ENSOMEG00000022185-9979.135ENSGGOG00000004646PUF609979.135Gorilla_gorilla
ENSOMEG00000022185-9990.057ENSHBUG00000009634-9990.057Haplochromis_burtoni
ENSOMEG00000022185-9981.973ENSHBUG00000015118puf60b9982.897Haplochromis_burtoni
ENSOMEG00000022185-9879.886ENSHGLG00000006111PUF609379.924Heterocephalus_glaber_female
ENSOMEG00000022185-9879.886ENSHGLG00100012362PUF609379.924Heterocephalus_glaber_male
ENSOMEG00000022185-9878.358ENSHCOG00000015541puf60b9980.347Hippocampus_comes
ENSOMEG00000022185-9572.400ENSHCOG00000000378-9970.667Hippocampus_comes
ENSOMEG00000022185-9876.908ENSIPUG00000004660puf60b9977.120Ictalurus_punctatus
ENSOMEG00000022185-9882.726ENSIPUG00000002453puf60a10082.567Ictalurus_punctatus
ENSOMEG00000022185-9879.696ENSSTOG00000025037PUF609479.735Ictidomys_tridecemlineatus
ENSOMEG00000022185-9879.886ENSJJAG00000001076Puf609380.039Jaculus_jaculus
ENSOMEG00000022185-9785.962ENSKMAG00000010106-9986.346Kryptolebias_marmoratus
ENSOMEG00000022185-9782.685ENSKMAG00000016745puf60b9982.879Kryptolebias_marmoratus
ENSOMEG00000022185-9880.000ENSLBEG00000012505puf60b9980.000Labrus_bergylta
ENSOMEG00000022185-6977.446ENSLACG00000005456PUF6010077.446Latimeria_chalumnae
ENSOMEG00000022185-9984.121ENSLOCG00000010106puf60b9984.310Lepisosteus_oculatus
ENSOMEG00000022185-9878.937ENSLAFG00000022929PUF609478.977Loxodonta_africana
ENSOMEG00000022185-9979.545ENSMFAG00000043373PUF609979.545Macaca_fascicularis
ENSOMEG00000022185-9979.135ENSMMUG00000013558PUF609979.135Macaca_mulatta
ENSOMEG00000022185-9978.947ENSMNEG00000031099PUF609978.947Macaca_nemestrina
ENSOMEG00000022185-9780.230ENSMLEG00000040009PUF609980.357Mandrillus_leucophaeus
ENSOMEG00000022185-9992.352ENSMAMG00000019476-9991.762Mastacembelus_armatus
ENSOMEG00000022185-9981.574ENSMAMG00000010394puf60b9979.735Mastacembelus_armatus
ENSOMEG00000022185-9782.685ENSMZEG00005018515puf60b9982.897Maylandia_zebra
ENSOMEG00000022185-9989.866ENSMZEG00005019425-9989.866Maylandia_zebra
ENSOMEG00000022185-9979.811ENSMGAG00000013070PUF609584.971Meleagris_gallopavo
ENSOMEG00000022185-9365.261ENSMAUG00000018549-9566.735Mesocricetus_auratus
ENSOMEG00000022185-6883.152ENSMAUG00000014267-9083.523Mesocricetus_auratus
ENSOMEG00000022185-9979.623ENSMICG00000012226PUF609979.696Microcebus_murinus
ENSOMEG00000022185-9879.886ENSMOCG00000018780Puf609379.924Microtus_ochrogaster
ENSOMEG00000022185-9782.685ENSMMOG00000004217puf60b9982.685Mola_mola
ENSOMEG00000022185-9882.326ENSMMOG00000018059-9983.721Mola_mola
ENSOMEG00000022185-9879.127ENSMODG00000009161PUF609479.843Monodelphis_domestica
ENSOMEG00000022185-9990.076ENSMALG00000000200-9989.101Monopterus_albus
ENSOMEG00000022185-9875.145ENSMALG00000006797puf60b9975.096Monopterus_albus
ENSOMEG00000022185-9880.076MGP_CAROLIEiJ_G0019910Puf609380.114Mus_caroli
ENSOMEG00000022185-9880.076ENSMUSG00000002524Puf609380.114Mus_musculus
ENSOMEG00000022185-9880.076MGP_PahariEiJ_G0019920Puf609380.114Mus_pahari
ENSOMEG00000022185-9880.076MGP_SPRETEiJ_G0020812Puf609380.114Mus_spretus
ENSOMEG00000022185-9879.507ENSMPUG00000008137PUF609279.545Mustela_putorius_furo
ENSOMEG00000022185-9974.576ENSMLUG00000013032-9877.255Myotis_lucifugus
ENSOMEG00000022185-9879.127ENSMLUG00000000238-9379.167Myotis_lucifugus
ENSOMEG00000022185-9879.886ENSNGAG00000000712Puf609980.614Nannospalax_galili
ENSOMEG00000022185-9989.655ENSNBRG00000017223-9989.655Neolamprologus_brichardi
ENSOMEG00000022185-7981.623ENSNBRG00000013047puf60b9781.623Neolamprologus_brichardi
ENSOMEG00000022185-9979.135ENSNLEG00000002156PUF609979.135Nomascus_leucogenys
ENSOMEG00000022185-7188.849ENSOPRG00000002147PUF607589.153Ochotona_princeps
ENSOMEG00000022185-7187.097ENSODEG00000014024-9087.097Octodon_degus
ENSOMEG00000022185-9560.521ENSODEG00000015513-9460.200Octodon_degus
ENSOMEG00000022185-9989.101ENSONIG00000014030-9989.101Oreochromis_niloticus
ENSOMEG00000022185-9882.500ENSONIG00000006247puf60b9982.567Oreochromis_niloticus
ENSOMEG00000022185-9765.107ENSOANG00000006962PUF609965.422Ornithorhynchus_anatinus
ENSOMEG00000022185-9981.784ENSORLG00000012279puf60b9982.490Oryzias_latipes
ENSOMEG00000022185-9894.369ENSORLG00000028655-10094.757Oryzias_latipes
ENSOMEG00000022185-10095.220ENSORLG00020018144-10095.602Oryzias_latipes_hni
ENSOMEG00000022185-9981.784ENSORLG00020007333puf609982.490Oryzias_latipes_hni
ENSOMEG00000022185-9982.420ENSORLG00015007718puf60b9983.140Oryzias_latipes_hsok
ENSOMEG00000022185-10095.029ENSORLG00015016833-10095.411Oryzias_latipes_hsok
ENSOMEG00000022185-9879.696ENSOGAG00000006259PUF609379.735Otolemur_garnettii
ENSOMEG00000022185-9877.159ENSOARG00000016235PUF609978.261Ovis_aries
ENSOMEG00000022185-9978.987ENSPPAG00000029933PUF609978.987Pan_paniscus
ENSOMEG00000022185-9979.323ENSPPRG00000003257PUF609980.754Panthera_pardus
ENSOMEG00000022185-9977.486ENSPTIG00000009795PUF609978.011Panthera_tigris_altaica
ENSOMEG00000022185-9978.987ENSPTRG00000020670PUF609978.987Pan_troglodytes
ENSOMEG00000022185-9979.135ENSPTRG00000043963-9979.135Pan_troglodytes
ENSOMEG00000022185-9978.947ENSPANG00000021936PUF609978.947Papio_anubis
ENSOMEG00000022185-9983.270ENSPKIG00000012204puf60b9983.821Paramormyrops_kingsleyae
ENSOMEG00000022185-9984.557ENSPKIG00000004295puf60a10089.053Paramormyrops_kingsleyae
ENSOMEG00000022185-9879.507ENSPSIG00000004679PUF609979.507Pelodiscus_sinensis
ENSOMEG00000022185-9881.538ENSPMGG00000013444puf60b9981.538Periophthalmus_magnuspinnatus
ENSOMEG00000022185-9879.886ENSPEMG00000008820Puf609379.924Peromyscus_maniculatus_bairdii
ENSOMEG00000022185-5184.810ENSPMAG00000009884puf60b9984.472Petromyzon_marinus
ENSOMEG00000022185-9979.323ENSPCIG00000020270PUF609879.962Phascolarctos_cinereus
ENSOMEG00000022185-9989.251ENSPFOG00000011118-9989.251Poecilia_formosa
ENSOMEG00000022185-9981.784ENSPFOG00000019217puf60b9982.574Poecilia_formosa
ENSOMEG00000022185-9989.060ENSPLAG00000017025-9289.060Poecilia_latipinna
ENSOMEG00000022185-9782.490ENSPLAG00000010754puf60b9982.897Poecilia_latipinna
ENSOMEG00000022185-9989.635ENSPMEG00000009767-9289.635Poecilia_mexicana
ENSOMEG00000022185-9981.784ENSPMEG00000000838puf60b9982.897Poecilia_mexicana
ENSOMEG00000022185-9979.482ENSPREG00000005440puf60b9981.288Poecilia_reticulata
ENSOMEG00000022185-7978.673ENSPPYG00000018951-9578.673Pongo_abelii
ENSOMEG00000022185-7980.142ENSPCAG00000014837PUF6010080.142Procavia_capensis
ENSOMEG00000022185-9979.395ENSPCOG00000027981PUF609979.507Propithecus_coquereli
ENSOMEG00000022185-9787.500ENSPVAG00000016167PUF608187.500Pteropus_vampyrus
ENSOMEG00000022185-9989.866ENSPNYG00000004273-9989.866Pundamilia_nyererei
ENSOMEG00000022185-9782.685ENSPNYG00000002556puf60b9982.685Pundamilia_nyererei
ENSOMEG00000022185-9876.923ENSPNAG00000019415puf60b9376.538Pygocentrus_nattereri
ENSOMEG00000022185-9683.865ENSPNAG00000019909puf60a9984.462Pygocentrus_nattereri
ENSOMEG00000022185-9880.076ENSRNOG00000009960Puf609380.114Rattus_norvegicus
ENSOMEG00000022185-9979.135ENSRBIG00000035274PUF609979.135Rhinopithecus_bieti
ENSOMEG00000022185-9978.947ENSRROG00000029360PUF609979.507Rhinopithecus_roxellana
ENSOMEG00000022185-9977.925ENSSBOG00000027089PUF609977.486Saimiri_boliviensis_boliviensis
ENSOMEG00000022185-8979.579ENSSHAG00000006668PUF609080.127Sarcophilus_harrisii
ENSOMEG00000022185-9777.672ENSSFOG00015019619puf60b9981.136Scleropages_formosus
ENSOMEG00000022185-9979.242ENSSFOG00015019371puf60a9886.151Scleropages_formosus
ENSOMEG00000022185-7488.316ENSSMAG00000016381puf60b7888.636Scophthalmus_maximus
ENSOMEG00000022185-9879.096ENSSDUG00000009935puf60b9981.276Seriola_dumerili
ENSOMEG00000022185-9990.019ENSSDUG00000007048-9990.019Seriola_dumerili
ENSOMEG00000022185-9888.304ENSSLDG00000007366-9988.304Seriola_lalandi_dorsalis
ENSOMEG00000022185-9981.439ENSSLDG00000024011puf60b9980.682Seriola_lalandi_dorsalis
ENSOMEG00000022185-6472.941ENSSPUG00000013518PUF609275.000Sphenodon_punctatus
ENSOMEG00000022185-9978.004ENSSPAG00000012144puf60b9980.492Stegastes_partitus
ENSOMEG00000022185-9790.802ENSSPAG00000020285-9991.585Stegastes_partitus
ENSOMEG00000022185-9780.422ENSSSCG00000038800PUF609780.556Sus_scrofa
ENSOMEG00000022185-5194.231ENSTGUG00000016423-10094.231Taeniopygia_guttata
ENSOMEG00000022185-9878.626ENSTGUG00000012797-9978.626Taeniopygia_guttata
ENSOMEG00000022185-9587.602ENSTRUG00000008843-9987.398Takifugu_rubripes
ENSOMEG00000022185-9882.692ENSTRUG00000005420puf60b9980.682Takifugu_rubripes
ENSOMEG00000022185-9882.885ENSTNIG00000013675puf60b9982.917Tetraodon_nigroviridis
ENSOMEG00000022185-9885.603ENSTNIG00000003069-10085.465Tetraodon_nigroviridis
ENSOMEG00000022185-7664.773ENSTBEG00000001899-10065.143Tupaia_belangeri
ENSOMEG00000022185-6983.849ENSTBEG00000002751-9783.849Tupaia_belangeri
ENSOMEG00000022185-9778.846ENSTTRG00000017088PUF609979.655Tursiops_truncatus
ENSOMEG00000022185-9979.135ENSUAMG00000024917PUF609979.135Ursus_americanus
ENSOMEG00000022185-9874.953ENSUMAG00000000272PUF609374.811Ursus_maritimus
ENSOMEG00000022185-9879.696ENSVVUG00000022527PUF609980.422Vulpes_vulpes
ENSOMEG00000022185-9778.887ENSXETG00000012469puf609979.093Xenopus_tropicalis
ENSOMEG00000022185-9582.696ENSXCOG00000012355puf60b9982.897Xiphophorus_couchianus
ENSOMEG00000022185-9981.784ENSXMAG00000001862puf60b9982.685Xiphophorus_maculatus
ENSOMEG00000022185-9689.157ENSXMAG00000010507-9988.353Xiphophorus_maculatus

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