EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000022250 (Gene tree)
Gene ID: 112159758
Gene Symbol: pym1
Alias: -
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 5333 bases
Position: chrNVQA01000024.1:23413274-23418606
Accession: 112159758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000020386	Mago-bind	PF09282.10	5.3e-13	1	1
ENSOMEP00000020395	Mago-bind	PF09282.10	5.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000029857	-	2861	-	ENSOMEP00000020395	215 (aa)	XP_024149782	UPI000CF80B3F
ENSOMET00000029844	-	603	-	ENSOMEP00000020386	200 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000022250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022250's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022250	pym1	94	61.421	ENSG00000170473	PYM1	99	62.136	Homo_sapiens
ENSOMEG00000022250	pym1	100	77.064	ENSAPOG00000023045	pym1	100	76.606	Acanthochromis_polyacanthus
ENSOMEG00000022250	pym1	91	59.474	ENSAMEG00000003091	PYM1	97	59.406	Ailuropoda_melanoleuca
ENSOMEG00000022250	pym1	100	80.556	ENSACIG00000012769	pym1	100	80.093	Amphilophus_citrinellus
ENSOMEG00000022250	pym1	100	77.209	ENSAOCG00000021358	pym1	100	76.606	Amphiprion_ocellaris
ENSOMEG00000022250	pym1	100	77.209	ENSAPEG00000022679	pym1	100	76.606	Amphiprion_percula
ENSOMEG00000022250	pym1	100	73.488	ENSATEG00000024022	pym1	100	76.279	Anabas_testudineus
ENSOMEG00000022250	pym1	94	58.416	ENSACAG00000005714	PYM1	99	57.727	Anolis_carolinensis
ENSOMEG00000022250	pym1	94	61.421	ENSANAG00000036967	PYM1	99	62.136	Aotus_nancymaae
ENSOMEG00000022250	pym1	99	64.486	ENSAMXG00000007650	pym1	99	64.486	Astyanax_mexicanus
ENSOMEG00000022250	pym1	94	63.131	ENSBTAG00000031146	PYM1	99	63.768	Bos_taurus
ENSOMEG00000022250	pym1	94	61.421	ENSCJAG00000041077	PYM1	99	62.136	Callithrix_jacchus
ENSOMEG00000022250	pym1	94	63.636	ENSCAFG00000000076	PYM1	99	64.251	Canis_familiaris
ENSOMEG00000022250	pym1	94	63.636	ENSCAFG00020026099	PYM1	99	64.251	Canis_lupus_dingo
ENSOMEG00000022250	pym1	94	61.421	ENSCHIG00000026207	PYM1	99	62.136	Capra_hircus
ENSOMEG00000022250	pym1	94	60.914	ENSTSYG00000000787	PYM1	99	61.650	Carlito_syrichta
ENSOMEG00000022250	pym1	89	61.622	ENSCAPG00000010374	PYM1	98	62.371	Cavia_aperea
ENSOMEG00000022250	pym1	94	62.944	ENSCPOG00000031546	PYM1	99	63.592	Cavia_porcellus
ENSOMEG00000022250	pym1	94	61.421	ENSCCAG00000026187	PYM1	99	62.136	Cebus_capucinus
ENSOMEG00000022250	pym1	94	61.421	ENSCATG00000018801	PYM1	99	62.136	Cercocebus_atys
ENSOMEG00000022250	pym1	94	63.959	ENSCLAG00000007964	PYM1	99	64.734	Chinchilla_lanigera
ENSOMEG00000022250	pym1	89	60.215	ENSCSAG00000005291	PYM1	97	61.026	Chlorocebus_sabaeus
ENSOMEG00000022250	pym1	99	39.450	ENSCING00000006448	-	99	40.187	Ciona_intestinalis
ENSOMEG00000022250	pym1	99	41.204	ENSCSAVG00000009805	-	94	40.741	Ciona_savignyi
ENSOMEG00000022250	pym1	94	61.421	ENSCANG00000020338	-	99	62.136	Colobus_angolensis_palliatus
ENSOMEG00000022250	pym1	93	60.513	ENSCANG00000019757	-	85	58.794	Colobus_angolensis_palliatus
ENSOMEG00000022250	pym1	91	51.309	ENSCGRG00001004231	-	96	52.683	Cricetulus_griseus_chok1gshd
ENSOMEG00000022250	pym1	94	58.376	ENSCGRG00001018051	-	99	61.353	Cricetulus_griseus_chok1gshd
ENSOMEG00000022250	pym1	94	58.376	ENSCGRG00000012495	-	99	61.353	Cricetulus_griseus_crigri
ENSOMEG00000022250	pym1	91	51.309	ENSCGRG00000018933	-	96	52.683	Cricetulus_griseus_crigri
ENSOMEG00000022250	pym1	94	73.980	ENSCSEG00000021531	pym1	100	75.481	Cynoglossus_semilaevis
ENSOMEG00000022250	pym1	99	77.830	ENSCVAG00000017360	pym1	88	76.415	Cyprinodon_variegatus
ENSOMEG00000022250	pym1	100	56.338	ENSDARG00000046024	pym1	100	56.338	Danio_rerio
ENSOMEG00000022250	pym1	93	60.825	ENSDNOG00000048414	PYM1	90	60.194	Dasypus_novemcinctus
ENSOMEG00000022250	pym1	94	62.626	ENSDORG00000029448	Pym1	99	63.285	Dipodomys_ordii
ENSOMEG00000022250	pym1	99	34.615	FBgn0034918	Pym	98	34.615	Drosophila_melanogaster
ENSOMEG00000022250	pym1	89	57.754	ENSETEG00000004461	-	98	58.163	Echinops_telfairi
ENSOMEG00000022250	pym1	50	58.559	ENSEBUG00000006292	pym1	69	52.055	Eptatretus_burgeri
ENSOMEG00000022250	pym1	89	57.732	ENSEASG00005002271	PYM1	85	59.585	Equus_asinus_asinus
ENSOMEG00000022250	pym1	94	61.421	ENSECAG00000011870	PYM1	99	62.136	Equus_caballus
ENSOMEG00000022250	pym1	100	65.714	ENSELUG00000024250	pym1	100	65.238	Esox_lucius
ENSOMEG00000022250	pym1	94	62.626	ENSFCAG00000013967	PYM1	99	63.285	Felis_catus
ENSOMEG00000022250	pym1	94	63.131	ENSFDAG00000006314	PYM1	99	63.592	Fukomys_damarensis
ENSOMEG00000022250	pym1	100	75.576	ENSFHEG00000005884	pym1	100	77.982	Fundulus_heteroclitus
ENSOMEG00000022250	pym1	94	63.366	ENSGMOG00000007239	pym1	97	63.592	Gadus_morhua
ENSOMEG00000022250	pym1	94	63.590	ENSGALG00000046169	PYM1	99	63.636	Gallus_gallus
ENSOMEG00000022250	pym1	100	76.126	ENSGAFG00000003280	pym1	100	74.771	Gambusia_affinis
ENSOMEG00000022250	pym1	100	67.788	ENSGACG00000010703	pym1	100	67.788	Gasterosteus_aculeatus
ENSOMEG00000022250	pym1	92	58.706	ENSGAGG00000001973	PYM1	93	59.434	Gopherus_agassizii
ENSOMEG00000022250	pym1	94	60.914	ENSGGOG00000043246	PYM1	99	61.650	Gorilla_gorilla
ENSOMEG00000022250	pym1	100	79.535	ENSHBUG00000012719	pym1	100	79.070	Haplochromis_burtoni
ENSOMEG00000022250	pym1	93	62.564	ENSHGLG00000017155	PYM1	99	61.650	Heterocephalus_glaber_female
ENSOMEG00000022250	pym1	93	62.564	ENSHGLG00100015341	PYM1	99	61.650	Heterocephalus_glaber_male
ENSOMEG00000022250	pym1	100	68.837	ENSHCOG00000007987	pym1	86	68.372	Hippocampus_comes
ENSOMEG00000022250	pym1	99	66.977	ENSIPUG00000005975	wibga	99	66.977	Ictalurus_punctatus
ENSOMEG00000022250	pym1	94	60.914	ENSSTOG00000014206	PYM1	99	61.650	Ictidomys_tridecemlineatus
ENSOMEG00000022250	pym1	94	59.278	ENSJJAG00000013338	Pym1	99	60.099	Jaculus_jaculus
ENSOMEG00000022250	pym1	100	78.733	ENSKMAG00000006351	pym1	100	79.186	Kryptolebias_marmoratus
ENSOMEG00000022250	pym1	100	73.488	ENSLBEG00000015707	pym1	100	72.727	Labrus_bergylta
ENSOMEG00000022250	pym1	90	62.564	ENSLACG00000014398	PYM1	94	64.078	Latimeria_chalumnae
ENSOMEG00000022250	pym1	94	61.616	ENSLAFG00000002369	PYM1	99	62.319	Loxodonta_africana
ENSOMEG00000022250	pym1	94	61.421	ENSMFAG00000003048	PYM1	99	62.136	Macaca_fascicularis
ENSOMEG00000022250	pym1	94	61.421	ENSMMUG00000011002	PYM1	99	62.136	Macaca_mulatta
ENSOMEG00000022250	pym1	94	61.421	ENSMNEG00000034677	PYM1	99	62.136	Macaca_nemestrina
ENSOMEG00000022250	pym1	94	61.421	ENSMLEG00000007971	PYM1	99	62.136	Mandrillus_leucophaeus
ENSOMEG00000022250	pym1	100	77.982	ENSMAMG00000001588	pym1	100	78.440	Mastacembelus_armatus
ENSOMEG00000022250	pym1	100	79.070	ENSMZEG00005026458	pym1	100	78.605	Maylandia_zebra
ENSOMEG00000022250	pym1	94	58.883	ENSMAUG00000007318	Pym1	99	61.836	Mesocricetus_auratus
ENSOMEG00000022250	pym1	94	61.421	ENSMICG00000032962	PYM1	99	62.136	Microcebus_murinus
ENSOMEG00000022250	pym1	94	58.883	ENSMOCG00000010208	Pym1	99	59.709	Microtus_ochrogaster
ENSOMEG00000022250	pym1	100	68.372	ENSMMOG00000009301	pym1	100	68.837	Mola_mola
ENSOMEG00000022250	pym1	100	76.498	ENSMALG00000013496	pym1	100	75.576	Monopterus_albus
ENSOMEG00000022250	pym1	93	60.825	MGP_CAROLIEiJ_G0015953	Pym1	99	60.680	Mus_caroli
ENSOMEG00000022250	pym1	93	60.825	ENSMUSG00000064030	Pym1	99	60.680	Mus_musculus
ENSOMEG00000022250	pym1	93	61.658	MGP_PahariEiJ_G0031131	Pym1	98	61.463	Mus_pahari
ENSOMEG00000022250	pym1	93	60.825	MGP_SPRETEiJ_G0016778	Pym1	99	60.680	Mus_spretus
ENSOMEG00000022250	pym1	94	60.914	ENSMPUG00000000931	PYM1	99	61.650	Mustela_putorius_furo
ENSOMEG00000022250	pym1	93	59.113	ENSMLUG00000003586	PYM1	99	59.048	Myotis_lucifugus
ENSOMEG00000022250	pym1	90	60.963	ENSNGAG00000019207	Pym1	92	61.735	Nannospalax_galili
ENSOMEG00000022250	pym1	100	79.535	ENSNBRG00000006951	pym1	100	79.070	Neolamprologus_brichardi
ENSOMEG00000022250	pym1	94	61.421	ENSNLEG00000017588	PYM1	99	62.136	Nomascus_leucogenys
ENSOMEG00000022250	pym1	88	57.692	ENSMEUG00000001017	PYM1	98	57.732	Notamacropus_eugenii
ENSOMEG00000022250	pym1	92	59.896	ENSOPRG00000007797	PYM1	96	60.697	Ochotona_princeps
ENSOMEG00000022250	pym1	94	63.636	ENSODEG00000004289	PYM1	99	64.251	Octodon_degus
ENSOMEG00000022250	pym1	100	81.395	ENSONIG00000016740	pym1	100	81.395	Oreochromis_niloticus
ENSOMEG00000022250	pym1	89	61.290	ENSOCUG00000025969	PYM1	85	61.538	Oryctolagus_cuniculus
ENSOMEG00000022250	pym1	100	88.372	ENSORLG00000030592	pym1	100	86.124	Oryzias_latipes
ENSOMEG00000022250	pym1	100	88.837	ENSORLG00020011264	pym1	100	87.442	Oryzias_latipes_hni
ENSOMEG00000022250	pym1	100	88.372	ENSORLG00015005287	pym1	100	85.581	Oryzias_latipes_hsok
ENSOMEG00000022250	pym1	89	61.290	ENSOGAG00000007038	PYM1	93	62.051	Otolemur_garnettii
ENSOMEG00000022250	pym1	94	61.929	ENSOARG00000010856	PYM1	99	62.621	Ovis_aries
ENSOMEG00000022250	pym1	94	61.421	ENSPPAG00000043630	PYM1	99	62.136	Pan_paniscus
ENSOMEG00000022250	pym1	94	62.626	ENSPPRG00000013243	PYM1	99	63.285	Panthera_pardus
ENSOMEG00000022250	pym1	94	62.121	ENSPTIG00000017380	PYM1	99	62.621	Panthera_tigris_altaica
ENSOMEG00000022250	pym1	94	61.421	ENSPTRG00000005067	PYM1	99	62.136	Pan_troglodytes
ENSOMEG00000022250	pym1	94	61.929	ENSPANG00000009562	PYM1	99	62.621	Papio_anubis
ENSOMEG00000022250	pym1	99	66.228	ENSPKIG00000006301	pym1	99	65.315	Paramormyrops_kingsleyae
ENSOMEG00000022250	pym1	94	56.784	ENSPSIG00000003043	PYM1	99	57.009	Pelodiscus_sinensis
ENSOMEG00000022250	pym1	99	67.961	ENSPMGG00000023161	pym1	99	67.961	Periophthalmus_magnuspinnatus
ENSOMEG00000022250	pym1	94	60.406	ENSPEMG00000009372	Pym1	99	61.836	Peromyscus_maniculatus_bairdii
ENSOMEG00000022250	pym1	88	56.593	ENSPCIG00000024658	PYM1	92	57.732	Phascolarctos_cinereus
ENSOMEG00000022250	pym1	100	78.704	ENSPFOG00000008193	pym1	100	78.341	Poecilia_formosa
ENSOMEG00000022250	pym1	100	77.828	ENSPLAG00000009228	pym1	100	76.923	Poecilia_latipinna
ENSOMEG00000022250	pym1	100	77.828	ENSPMEG00000001505	pym1	100	76.923	Poecilia_mexicana
ENSOMEG00000022250	pym1	90	59.043	ENSPPYG00000004635	PYM1	97	60.000	Pongo_abelii
ENSOMEG00000022250	pym1	94	60.914	ENSPCOG00000019706	PYM1	99	61.650	Propithecus_coquereli
ENSOMEG00000022250	pym1	90	60.963	ENSPVAG00000011437	PYM1	97	61.735	Pteropus_vampyrus
ENSOMEG00000022250	pym1	100	80.000	ENSPNYG00000012871	pym1	100	79.535	Pundamilia_nyererei
ENSOMEG00000022250	pym1	99	68.664	ENSPNAG00000018833	pym1	99	68.203	Pygocentrus_nattereri
ENSOMEG00000022250	pym1	79	49.432	ENSRNOG00000049415	AABR07055413.1	98	45.673	Rattus_norvegicus
ENSOMEG00000022250	pym1	92	55.941	ENSRNOG00000058130	Pym1	97	59.804	Rattus_norvegicus
ENSOMEG00000022250	pym1	94	57.360	ENSRBIG00000033362	PYM1	98	58.252	Rhinopithecus_bieti
ENSOMEG00000022250	pym1	94	61.421	ENSRROG00000043620	PYM1	99	62.136	Rhinopithecus_roxellana
ENSOMEG00000022250	pym1	94	61.421	ENSSBOG00000029393	PYM1	99	62.136	Saimiri_boliviensis_boliviensis
ENSOMEG00000022250	pym1	93	59.585	ENSSHAG00000008280	PYM1	99	59.512	Sarcophilus_harrisii
ENSOMEG00000022250	pym1	93	66.359	ENSSFOG00015021475	pym1	100	67.241	Scleropages_formosus
ENSOMEG00000022250	pym1	100	74.419	ENSSMAG00000020912	pym1	100	73.953	Scophthalmus_maximus
ENSOMEG00000022250	pym1	100	78.605	ENSSDUG00000001807	pym1	100	78.605	Seriola_dumerili
ENSOMEG00000022250	pym1	100	79.602	ENSSLDG00000013730	pym1	100	79.602	Seriola_lalandi_dorsalis
ENSOMEG00000022250	pym1	89	57.143	ENSSARG00000009569	PYM1	98	61.735	Sorex_araneus
ENSOMEG00000022250	pym1	90	56.158	ENSSPUG00000015059	PYM1	97	57.561	Sphenodon_punctatus
ENSOMEG00000022250	pym1	100	79.167	ENSSPAG00000020100	pym1	100	78.636	Stegastes_partitus
ENSOMEG00000022250	pym1	94	60.914	ENSSSCG00000040825	PYM1	99	61.650	Sus_scrofa
ENSOMEG00000022250	pym1	99	73.023	ENSTRUG00000021367	pym1	100	71.028	Takifugu_rubripes
ENSOMEG00000022250	pym1	100	67.568	ENSTNIG00000012534	pym1	100	67.568	Tetraodon_nigroviridis
ENSOMEG00000022250	pym1	88	57.923	ENSTBEG00000004208	PYM1	98	57.436	Tupaia_belangeri
ENSOMEG00000022250	pym1	90	61.497	ENSTTRG00000014971	PYM1	97	64.286	Tursiops_truncatus
ENSOMEG00000022250	pym1	94	59.898	ENSUAMG00000014521	PYM1	99	60.680	Ursus_americanus
ENSOMEG00000022250	pym1	91	56.842	ENSUMAG00000016241	PYM1	89	56.931	Ursus_maritimus
ENSOMEG00000022250	pym1	94	63.131	ENSVVUG00000022749	PYM1	99	63.285	Vulpes_vulpes
ENSOMEG00000022250	pym1	94	63.959	ENSXETG00000021850	pym1	99	63.462	Xenopus_tropicalis
ENSOMEG00000022250	pym1	100	76.923	ENSXMAG00000011649	pym1	100	76.018	Xiphophorus_maculatus