EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000022260 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 986 bases
Position: chrNVQA01000020.1:22570101-22571086
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000020406	RVT_1	PF00078.27	3.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000036093	-	396	-	ENSOMEP00000020406	131 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000022260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000022260	-	83	82.569	ENSOMEG00000014808	-	82	82.569
ENSOMEG00000022260	-	91	92.500	ENSOMEG00000007757	-	90	92.500
ENSOMEG00000022260	-	91	94.167	ENSOMEG00000014346	-	87	94.167

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022260	-	66	46.078	ENSLBEG00000021860	-	66	46.078	Labrus_bergylta
ENSOMEG00000022260	-	91	67.424	ENSORLG00000022721	-	75	67.424	Oryzias_latipes
ENSOMEG00000022260	-	77	67.257	ENSORLG00000022972	-	74	67.257	Oryzias_latipes
ENSOMEG00000022260	-	91	69.466	ENSORLG00000022894	-	72	69.466	Oryzias_latipes
ENSOMEG00000022260	-	77	69.912	ENSORLG00000026838	-	67	69.912	Oryzias_latipes
ENSOMEG00000022260	-	78	66.667	ENSORLG00000024721	-	78	66.667	Oryzias_latipes
ENSOMEG00000022260	-	81	70.339	ENSORLG00000023269	-	74	70.339	Oryzias_latipes
ENSOMEG00000022260	-	91	63.571	ENSORLG00000022176	-	89	63.571	Oryzias_latipes
ENSOMEG00000022260	-	83	62.295	ENSORLG00000025417	-	81	62.295	Oryzias_latipes
ENSOMEG00000022260	-	78	70.175	ENSORLG00020014807	-	81	70.175	Oryzias_latipes_hni
ENSOMEG00000022260	-	76	71.000	ENSORLG00020021895	-	78	71.000	Oryzias_latipes_hni
ENSOMEG00000022260	-	67	69.000	ENSORLG00020017820	-	61	69.000	Oryzias_latipes_hni
ENSOMEG00000022260	-	76	68.468	ENSORLG00020005309	-	77	68.468	Oryzias_latipes_hni
ENSOMEG00000022260	-	78	68.421	ENSORLG00020017866	-	72	68.421	Oryzias_latipes_hni
ENSOMEG00000022260	-	57	65.517	ENSORLG00020000341	-	67	65.517	Oryzias_latipes_hni
ENSOMEG00000022260	-	76	67.568	ENSORLG00020008448	-	69	67.568	Oryzias_latipes_hni
ENSOMEG00000022260	-	80	61.905	ENSORLG00015016137	-	86	61.905	Oryzias_latipes_hsok
ENSOMEG00000022260	-	76	64.865	ENSORLG00015011500	-	57	64.865	Oryzias_latipes_hsok
ENSOMEG00000022260	-	76	67.568	ENSORLG00015001036	-	65	67.568	Oryzias_latipes_hsok
ENSOMEG00000022260	-	76	60.000	ENSORLG00015005894	-	64	60.000	Oryzias_latipes_hsok
ENSOMEG00000022260	-	50	38.144	ENSPMGG00000013430	-	63	38.144	Periophthalmus_magnuspinnatus