EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000022379 (Gene tree)
Gene ID: 112150919
Gene Symbol: lsg1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 4507 bases
Position: chrNVQA01000014.1:10774239-10778745
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000035220	MMR_HSR1	PF01926.23	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000029959	-	1839	-	ENSOMEP00000035220	612 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000022379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022379's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022379	lsg1	99	63.374	ENSG00000041802	LSG1	90	76.398	Homo_sapiens
ENSOMEG00000022379	lsg1	100	77.460	ENSAPOG00000009694	lsg1	99	77.419	Acanthochromis_polyacanthus
ENSOMEG00000022379	lsg1	100	60.758	ENSAMEG00000009343	LSG1	98	61.515	Ailuropoda_melanoleuca
ENSOMEG00000022379	lsg1	98	79.545	ENSACIG00000012406	lsg1	98	78.896	Amphilophus_citrinellus
ENSOMEG00000022379	lsg1	100	77.302	ENSAOCG00000016066	lsg1	99	77.310	Amphiprion_ocellaris
ENSOMEG00000022379	lsg1	100	77.472	ENSAPEG00000003252	lsg1	99	77.419	Amphiprion_percula
ENSOMEG00000022379	lsg1	98	79.032	ENSATEG00000011794	lsg1	98	78.871	Anabas_testudineus
ENSOMEG00000022379	lsg1	95	59.744	ENSACAG00000004222	LSG1	100	59.936	Anolis_carolinensis
ENSOMEG00000022379	lsg1	99	63.222	ENSANAG00000021153	LSG1	98	62.636	Aotus_nancymaae
ENSOMEG00000022379	lsg1	100	77.948	ENSACLG00000000520	lsg1	98	77.708	Astatotilapia_calliptera
ENSOMEG00000022379	lsg1	100	68.788	ENSAMXG00000008271	lsg1	98	70.032	Astyanax_mexicanus
ENSOMEG00000022379	lsg1	99	64.110	ENSBTAG00000008461	LSG1	98	64.476	Bos_taurus
ENSOMEG00000022379	lsg1	84	40.891	WBGene00016907	C53H9.2	82	44.020	Caenorhabditis_elegans
ENSOMEG00000022379	lsg1	99	63.374	ENSCJAG00000013962	LSG1	98	62.946	Callithrix_jacchus
ENSOMEG00000022379	lsg1	95	63.233	ENSCAFG00000013445	LSG1	100	62.998	Canis_familiaris
ENSOMEG00000022379	lsg1	100	62.048	ENSCAFG00020002216	LSG1	99	62.219	Canis_lupus_dingo
ENSOMEG00000022379	lsg1	100	64.352	ENSCHIG00000015769	LSG1	98	64.826	Capra_hircus
ENSOMEG00000022379	lsg1	99	62.367	ENSTSYG00000001447	LSG1	98	61.765	Carlito_syrichta
ENSOMEG00000022379	lsg1	94	62.458	ENSCAPG00000009856	LSG1	99	62.645	Cavia_aperea
ENSOMEG00000022379	lsg1	99	63.070	ENSCCAG00000035744	LSG1	98	62.791	Cebus_capucinus
ENSOMEG00000022379	lsg1	99	63.222	ENSCATG00000042060	LSG1	98	61.705	Cercocebus_atys
ENSOMEG00000022379	lsg1	99	63.142	ENSCSAG00000008796	LSG1	90	62.791	Chlorocebus_sabaeus
ENSOMEG00000022379	lsg1	100	64.502	ENSCPBG00000015941	LSG1	82	64.869	Chrysemys_picta_bellii
ENSOMEG00000022379	lsg1	84	49.419	ENSCING00000007079	-	97	49.304	Ciona_intestinalis
ENSOMEG00000022379	lsg1	93	46.062	ENSCSAVG00000002514	-	98	49.799	Ciona_savignyi
ENSOMEG00000022379	lsg1	99	61.854	ENSCANG00000030709	LSG1	98	62.016	Colobus_angolensis_palliatus
ENSOMEG00000022379	lsg1	99	64.420	ENSCGRG00001019846	Lsg1	98	64.960	Cricetulus_griseus_chok1gshd
ENSOMEG00000022379	lsg1	99	63.846	ENSCGRG00000014617	Lsg1	98	64.409	Cricetulus_griseus_crigri
ENSOMEG00000022379	lsg1	98	76.527	ENSCSEG00000008522	lsg1	98	76.527	Cynoglossus_semilaevis
ENSOMEG00000022379	lsg1	97	78.793	ENSCVAG00000002484	lsg1	98	79.708	Cyprinodon_variegatus
ENSOMEG00000022379	lsg1	100	70.872	ENSDARG00000015352	lsg1	98	71.292	Danio_rerio
ENSOMEG00000022379	lsg1	99	62.367	ENSDNOG00000006224	LSG1	98	62.693	Dasypus_novemcinctus
ENSOMEG00000022379	lsg1	99	49.199	FBgn0266284	Ns3	98	49.169	Drosophila_melanogaster
ENSOMEG00000022379	lsg1	87	76.000	ENSETEG00000003888	LSG1	87	80.645	Echinops_telfairi
ENSOMEG00000022379	lsg1	88	56.098	ENSEBUG00000003119	lsg1	85	56.620	Eptatretus_burgeri
ENSOMEG00000022379	lsg1	99	63.198	ENSEASG00005000678	LSG1	98	63.158	Equus_asinus_asinus
ENSOMEG00000022379	lsg1	99	63.047	ENSECAG00000017659	LSG1	98	63.003	Equus_caballus
ENSOMEG00000022379	lsg1	86	56.410	ENSEEUG00000015217	LSG1	85	56.410	Erinaceus_europaeus
ENSOMEG00000022379	lsg1	100	71.770	ENSELUG00000023973	lsg1	98	71.824	Esox_lucius
ENSOMEG00000022379	lsg1	100	61.898	ENSFCAG00000024957	LSG1	98	61.905	Felis_catus
ENSOMEG00000022379	lsg1	92	61.102	ENSFALG00000007210	LSG1	94	60.778	Ficedula_albicollis
ENSOMEG00000022379	lsg1	99	61.838	ENSFDAG00000017373	LSG1	98	62.798	Fukomys_damarensis
ENSOMEG00000022379	lsg1	97	78.331	ENSFHEG00000003680	lsg1	98	78.115	Fundulus_heteroclitus
ENSOMEG00000022379	lsg1	90	79.835	ENSGMOG00000015834	lsg1	87	79.835	Gadus_morhua
ENSOMEG00000022379	lsg1	99	58.584	ENSGALG00000007058	LSG1	86	59.472	Gallus_gallus
ENSOMEG00000022379	lsg1	97	78.560	ENSGAFG00000015831	lsg1	98	78.827	Gambusia_affinis
ENSOMEG00000022379	lsg1	98	74.601	ENSGACG00000009323	lsg1	98	74.441	Gasterosteus_aculeatus
ENSOMEG00000022379	lsg1	99	63.222	ENSGGOG00000000520	LSG1	98	62.636	Gorilla_gorilla
ENSOMEG00000022379	lsg1	100	78.450	ENSHBUG00000005659	lsg1	98	78.219	Haplochromis_burtoni
ENSOMEG00000022379	lsg1	99	63.507	ENSHGLG00000017390	LSG1	98	64.355	Heterocephalus_glaber_female
ENSOMEG00000022379	lsg1	99	63.507	ENSHGLG00100018587	LSG1	98	64.355	Heterocephalus_glaber_male
ENSOMEG00000022379	lsg1	97	75.240	ENSHCOG00000016848	lsg1	98	74.881	Hippocampus_comes
ENSOMEG00000022379	lsg1	100	70.405	ENSIPUG00000008631	lsg1	98	71.151	Ictalurus_punctatus
ENSOMEG00000022379	lsg1	72	58.351	ENSSTOG00000010234	LSG1	90	59.053	Ictidomys_tridecemlineatus
ENSOMEG00000022379	lsg1	99	64.050	ENSJJAG00000015513	Lsg1	98	64.583	Jaculus_jaculus
ENSOMEG00000022379	lsg1	98	77.723	ENSKMAG00000009681	lsg1	98	77.723	Kryptolebias_marmoratus
ENSOMEG00000022379	lsg1	98	78.073	ENSLBEG00000024261	lsg1	98	77.907	Labrus_bergylta
ENSOMEG00000022379	lsg1	100	63.910	ENSLACG00000013399	LSG1	98	64.417	Latimeria_chalumnae
ENSOMEG00000022379	lsg1	98	69.921	ENSLOCG00000004918	lsg1	98	70.394	Lepisosteus_oculatus
ENSOMEG00000022379	lsg1	99	64.043	ENSLAFG00000012919	-	98	64.139	Loxodonta_africana
ENSOMEG00000022379	lsg1	99	63.070	ENSMFAG00000039903	LSG1	98	61.550	Macaca_fascicularis
ENSOMEG00000022379	lsg1	99	63.070	ENSMMUG00000010708	LSG1	98	62.791	Macaca_mulatta
ENSOMEG00000022379	lsg1	99	63.070	ENSMNEG00000031538	LSG1	98	61.705	Macaca_nemestrina
ENSOMEG00000022379	lsg1	99	62.918	ENSMLEG00000041184	LSG1	98	62.636	Mandrillus_leucophaeus
ENSOMEG00000022379	lsg1	100	78.365	ENSMAMG00000000470	lsg1	98	78.560	Mastacembelus_armatus
ENSOMEG00000022379	lsg1	100	78.605	ENSMZEG00005017865	lsg1	98	78.378	Maylandia_zebra
ENSOMEG00000022379	lsg1	88	59.524	ENSMGAG00000007050	LSG1	99	59.628	Meleagris_gallopavo
ENSOMEG00000022379	lsg1	91	63.855	ENSMAUG00000016976	Lsg1	90	63.826	Mesocricetus_auratus
ENSOMEG00000022379	lsg1	99	61.890	ENSMICG00000049087	LSG1	98	62.986	Microcebus_murinus
ENSOMEG00000022379	lsg1	99	63.174	ENSMOCG00000022136	Lsg1	98	64.151	Microtus_ochrogaster
ENSOMEG00000022379	lsg1	98	76.373	ENSMMOG00000008884	lsg1	98	76.539	Mola_mola
ENSOMEG00000022379	lsg1	99	54.984	ENSMODG00000019828	LSG1	98	54.631	Monodelphis_domestica
ENSOMEG00000022379	lsg1	100	62.946	MGP_CAROLIEiJ_G0020648	Lsg1	98	64.082	Mus_caroli
ENSOMEG00000022379	lsg1	100	63.256	ENSMUSG00000022538	Lsg1	98	64.557	Mus_musculus
ENSOMEG00000022379	lsg1	98	63.793	MGP_PahariEiJ_G0016352	Lsg1	98	63.836	Mus_pahari
ENSOMEG00000022379	lsg1	100	64.031	MGP_SPRETEiJ_G0021544	Lsg1	98	64.241	Mus_spretus
ENSOMEG00000022379	lsg1	100	62.219	ENSMPUG00000003734	LSG1	98	62.597	Mustela_putorius_furo
ENSOMEG00000022379	lsg1	100	63.247	ENSMLUG00000012548	LSG1	98	63.551	Myotis_lucifugus
ENSOMEG00000022379	lsg1	99	63.101	ENSNGAG00000021872	Lsg1	98	63.651	Nannospalax_galili
ENSOMEG00000022379	lsg1	99	62.918	ENSNLEG00000008293	LSG1	98	62.791	Nomascus_leucogenys
ENSOMEG00000022379	lsg1	70	69.072	ENSMEUG00000009041	-	83	69.072	Notamacropus_eugenii
ENSOMEG00000022379	lsg1	100	77.504	ENSONIG00000002635	lsg1	98	77.409	Oreochromis_niloticus
ENSOMEG00000022379	lsg1	95	65.534	ENSOANG00000012742	LSG1	99	65.210	Ornithorhynchus_anatinus
ENSOMEG00000022379	lsg1	99	62.179	ENSOCUG00000004817	LSG1	98	62.346	Oryctolagus_cuniculus
ENSOMEG00000022379	lsg1	98	91.240	ENSORLG00000007695	lsg1	98	91.240	Oryzias_latipes
ENSOMEG00000022379	lsg1	98	90.180	ENSORLG00020016286	lsg1	98	90.344	Oryzias_latipes_hni
ENSOMEG00000022379	lsg1	98	90.682	ENSORLG00015012025	lsg1	98	90.216	Oryzias_latipes_hsok
ENSOMEG00000022379	lsg1	99	61.388	ENSOGAG00000003475	LSG1	98	61.574	Otolemur_garnettii
ENSOMEG00000022379	lsg1	100	62.940	ENSOARG00000020403	LSG1	98	63.750	Ovis_aries
ENSOMEG00000022379	lsg1	99	62.387	ENSPPAG00000029271	LSG1	98	62.326	Pan_paniscus
ENSOMEG00000022379	lsg1	100	61.940	ENSPPRG00000010281	LSG1	98	61.562	Panthera_pardus
ENSOMEG00000022379	lsg1	100	62.199	ENSPTIG00000010789	LSG1	98	61.824	Panthera_tigris_altaica
ENSOMEG00000022379	lsg1	99	62.236	ENSPTRG00000015760	LSG1	98	62.171	Pan_troglodytes
ENSOMEG00000022379	lsg1	99	62.918	ENSPANG00000018249	LSG1	98	61.395	Papio_anubis
ENSOMEG00000022379	lsg1	99	70.300	ENSPKIG00000002895	lsg1	98	71.729	Paramormyrops_kingsleyae
ENSOMEG00000022379	lsg1	96	61.478	ENSPSIG00000009821	LSG1	99	60.472	Pelodiscus_sinensis
ENSOMEG00000022379	lsg1	95	77.517	ENSPMGG00000000931	lsg1	100	76.364	Periophthalmus_magnuspinnatus
ENSOMEG00000022379	lsg1	99	63.344	ENSPEMG00000012082	-	98	63.323	Peromyscus_maniculatus_bairdii
ENSOMEG00000022379	lsg1	99	58.754	ENSPMAG00000007451	lsg1	98	58.699	Petromyzon_marinus
ENSOMEG00000022379	lsg1	98	60.622	ENSPCIG00000013890	LSG1	82	60.622	Phascolarctos_cinereus
ENSOMEG00000022379	lsg1	97	76.763	ENSPFOG00000021882	lsg1	98	77.564	Poecilia_formosa
ENSOMEG00000022379	lsg1	97	76.973	ENSPLAG00000019536	lsg1	98	77.244	Poecilia_latipinna
ENSOMEG00000022379	lsg1	97	76.518	ENSPMEG00000017281	lsg1	98	76.837	Poecilia_mexicana
ENSOMEG00000022379	lsg1	97	66.561	ENSPREG00000006048	lsg1	98	66.877	Poecilia_reticulata
ENSOMEG00000022379	lsg1	92	61.221	ENSPPYG00000014425	LSG1	98	61.383	Pongo_abelii
ENSOMEG00000022379	lsg1	89	73.333	ENSPCAG00000005511	LSG1	69	79.032	Procavia_capensis
ENSOMEG00000022379	lsg1	99	62.671	ENSPCOG00000012360	LSG1	98	62.074	Propithecus_coquereli
ENSOMEG00000022379	lsg1	100	77.948	ENSPNYG00000021994	lsg1	98	77.708	Pundamilia_nyererei
ENSOMEG00000022379	lsg1	100	70.698	ENSPNAG00000015533	lsg1	98	70.300	Pygocentrus_nattereri
ENSOMEG00000022379	lsg1	100	62.500	ENSRNOG00000001727	Lsg1	98	62.830	Rattus_norvegicus
ENSOMEG00000022379	lsg1	99	62.405	ENSRBIG00000029053	LSG1	98	62.422	Rhinopithecus_bieti
ENSOMEG00000022379	lsg1	99	62.405	ENSRROG00000037702	LSG1	98	62.422	Rhinopithecus_roxellana
ENSOMEG00000022379	lsg1	83	39.810	YGL099W	LSG1	71	41.414	Saccharomyces_cerevisiae
ENSOMEG00000022379	lsg1	99	63.222	ENSSBOG00000034938	LSG1	98	62.791	Saimiri_boliviensis_boliviensis
ENSOMEG00000022379	lsg1	76	60.192	ENSSHAG00000003487	LSG1	100	60.192	Sarcophilus_harrisii
ENSOMEG00000022379	lsg1	98	71.019	ENSSFOG00015008955	lsg1	98	70.860	Scleropages_formosus
ENSOMEG00000022379	lsg1	98	78.130	ENSSDUG00000004622	lsg1	98	77.813	Seriola_dumerili
ENSOMEG00000022379	lsg1	98	80.325	ENSSLDG00000010869	lsg1	98	80.000	Seriola_lalandi_dorsalis
ENSOMEG00000022379	lsg1	86	64.223	ENSSARG00000012981	LSG1	78	65.075	Sorex_araneus
ENSOMEG00000022379	lsg1	100	63.014	ENSSPUG00000016347	LSG1	98	62.305	Sphenodon_punctatus
ENSOMEG00000022379	lsg1	100	77.047	ENSSPAG00000005508	lsg1	99	77.741	Stegastes_partitus
ENSOMEG00000022379	lsg1	100	63.932	ENSSSCG00000011827	LSG1	98	63.823	Sus_scrofa
ENSOMEG00000022379	lsg1	88	60.100	ENSTGUG00000009068	LSG1	100	60.302	Taeniopygia_guttata
ENSOMEG00000022379	lsg1	97	72.742	ENSTRUG00000017380	lsg1	98	72.552	Takifugu_rubripes
ENSOMEG00000022379	lsg1	97	75.563	ENSTNIG00000015570	lsg1	98	75.520	Tetraodon_nigroviridis
ENSOMEG00000022379	lsg1	100	59.327	ENSTTRG00000000559	LSG1	98	59.750	Tursiops_truncatus
ENSOMEG00000022379	lsg1	100	61.212	ENSUAMG00000012454	LSG1	98	61.669	Ursus_americanus
ENSOMEG00000022379	lsg1	100	61.212	ENSUMAG00000000855	LSG1	98	61.669	Ursus_maritimus
ENSOMEG00000022379	lsg1	95	60.064	ENSVPAG00000012400	LSG1	100	60.064	Vicugna_pacos
ENSOMEG00000022379	lsg1	95	62.480	ENSVVUG00000008956	LSG1	97	62.240	Vulpes_vulpes
ENSOMEG00000022379	lsg1	100	66.151	ENSXETG00000003451	lsg1	98	66.935	Xenopus_tropicalis
ENSOMEG00000022379	lsg1	97	77.994	ENSXCOG00000003239	lsg1	98	77.939	Xiphophorus_couchianus
ENSOMEG00000022379	lsg1	97	77.905	ENSXMAG00000005536	lsg1	98	78.176	Xiphophorus_maculatus