EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000022509 (Gene tree)
Gene ID: -
Gene Symbol: lsm8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 2358 bases
Position: chrNVQA01000003.1:18985268-18987625
Accession: ZDB-GENE-070629-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000035311	LSM	PF01423.22	4.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000030133	-	273	-	ENSOMEP00000035311	90 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000022509's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022509's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022509	lsm8	100	81.250	ENSG00000128534	LSM8	92	97.101	Homo_sapiens
ENSOMEG00000022509	lsm8	100	86.458	ENSAPOG00000008649	lsm8	100	85.417	Acanthochromis_polyacanthus
ENSOMEG00000022509	lsm8	100	81.250	ENSAMEG00000001162	LSM8	100	80.208	Ailuropoda_melanoleuca
ENSOMEG00000022509	lsm8	83	96.000	ENSACIG00000014694	lsm8	92	100.000	Amphilophus_citrinellus
ENSOMEG00000022509	lsm8	100	86.458	ENSAOCG00000013926	lsm8	100	85.417	Amphiprion_ocellaris
ENSOMEG00000022509	lsm8	100	86.458	ENSAPEG00000023502	lsm8	100	85.417	Amphiprion_percula
ENSOMEG00000022509	lsm8	83	96.000	ENSATEG00000023432	lsm8	92	100.000	Anabas_testudineus
ENSOMEG00000022509	lsm8	83	94.667	ENSAPLG00000005115	LSM8	70	98.551	Anas_platyrhynchos
ENSOMEG00000022509	lsm8	100	81.250	ENSANAG00000027771	LSM8	93	97.101	Aotus_nancymaae
ENSOMEG00000022509	lsm8	100	86.458	ENSACLG00000011253	lsm8	100	85.417	Astatotilapia_calliptera
ENSOMEG00000022509	lsm8	100	85.417	ENSAMXG00000042902	lsm8	100	84.375	Astyanax_mexicanus
ENSOMEG00000022509	lsm8	100	81.250	ENSBTAG00000012649	LSM8	100	80.208	Bos_taurus
ENSOMEG00000022509	lsm8	98	47.872	WBGene00003082	lsm-8	96	47.872	Caenorhabditis_elegans
ENSOMEG00000022509	lsm8	100	81.250	ENSCJAG00000046406	LSM8	93	97.101	Callithrix_jacchus
ENSOMEG00000022509	lsm8	98	81.915	ENSCAFG00000016459	LSM8	95	81.915	Canis_familiaris
ENSOMEG00000022509	lsm8	100	81.250	ENSCAFG00020007643	-	100	80.208	Canis_lupus_dingo
ENSOMEG00000022509	lsm8	88	78.824	ENSCAFG00020012800	-	66	77.647	Canis_lupus_dingo
ENSOMEG00000022509	lsm8	83	93.333	ENSCHIG00000014201	LSM8	73	97.101	Capra_hircus
ENSOMEG00000022509	lsm8	100	81.250	ENSTSYG00000032434	LSM8	100	80.208	Carlito_syrichta
ENSOMEG00000022509	lsm8	82	94.595	ENSCAPG00000008253	LSM8	93	97.101	Cavia_aperea
ENSOMEG00000022509	lsm8	100	81.250	ENSCPOG00000035673	LSM8	100	80.208	Cavia_porcellus
ENSOMEG00000022509	lsm8	100	81.250	ENSCCAG00000021329	LSM8	93	97.101	Cebus_capucinus
ENSOMEG00000022509	lsm8	100	81.250	ENSCATG00000045302	LSM8	93	97.101	Cercocebus_atys
ENSOMEG00000022509	lsm8	100	81.250	ENSCLAG00000003726	LSM8	100	80.208	Chinchilla_lanigera
ENSOMEG00000022509	lsm8	100	81.250	ENSCSAG00000010802	-	100	80.208	Chlorocebus_sabaeus
ENSOMEG00000022509	lsm8	100	78.125	ENSCSAG00000019007	-	100	77.083	Chlorocebus_sabaeus
ENSOMEG00000022509	lsm8	83	93.333	ENSCPBG00000008154	LSM8	70	97.101	Chrysemys_picta_bellii
ENSOMEG00000022509	lsm8	100	65.625	ENSCING00000024877	-	100	64.583	Ciona_intestinalis
ENSOMEG00000022509	lsm8	100	81.250	ENSCANG00000040728	LSM8	93	97.101	Colobus_angolensis_palliatus
ENSOMEG00000022509	lsm8	100	81.250	ENSCGRG00001000450	Lsm8	100	80.208	Cricetulus_griseus_chok1gshd
ENSOMEG00000022509	lsm8	83	93.333	ENSCGRG00000005587	Lsm8	81	97.101	Cricetulus_griseus_crigri
ENSOMEG00000022509	lsm8	100	93.407	ENSCSEG00000004164	lsm8	100	92.308	Cynoglossus_semilaevis
ENSOMEG00000022509	lsm8	100	85.417	ENSCVAG00000020547	lsm8	100	84.375	Cyprinodon_variegatus
ENSOMEG00000022509	lsm8	100	83.333	ENSDARG00000091656	lsm8	100	82.292	Danio_rerio
ENSOMEG00000022509	lsm8	100	81.250	ENSDNOG00000034613	LSM8	100	80.208	Dasypus_novemcinctus
ENSOMEG00000022509	lsm8	100	81.250	ENSDORG00000027868	Lsm8	100	80.208	Dipodomys_ordii
ENSOMEG00000022509	lsm8	98	62.766	FBgn0035271	CG2021	99	62.766	Drosophila_melanogaster
ENSOMEG00000022509	lsm8	100	82.292	ENSETEG00000011594	LSM8	100	81.250	Echinops_telfairi
ENSOMEG00000022509	lsm8	82	93.243	ENSEBUG00000012017	lsm8	93	95.652	Eptatretus_burgeri
ENSOMEG00000022509	lsm8	100	81.250	ENSEASG00005008932	LSM8	62	81.250	Equus_asinus_asinus
ENSOMEG00000022509	lsm8	80	97.222	ENSECAG00000024025	LSM8	71	97.222	Equus_caballus
ENSOMEG00000022509	lsm8	100	83.333	ENSELUG00000010138	lsm8	100	82.292	Esox_lucius
ENSOMEG00000022509	lsm8	84	62.195	ENSFCAG00000044794	-	60	68.852	Felis_catus
ENSOMEG00000022509	lsm8	100	81.250	ENSFCAG00000036620	-	100	80.208	Felis_catus
ENSOMEG00000022509	lsm8	100	82.292	ENSFALG00000010023	LSM8	100	81.250	Ficedula_albicollis
ENSOMEG00000022509	lsm8	100	81.250	ENSFDAG00000019530	LSM8	100	80.208	Fukomys_damarensis
ENSOMEG00000022509	lsm8	100	86.458	ENSFHEG00000013729	lsm8	100	85.417	Fundulus_heteroclitus
ENSOMEG00000022509	lsm8	100	82.292	ENSGALG00000009110	LSM8	100	81.250	Gallus_gallus
ENSOMEG00000022509	lsm8	100	85.417	ENSGAFG00000001135	lsm8	100	84.375	Gambusia_affinis
ENSOMEG00000022509	lsm8	100	81.250	ENSGAGG00000017366	LSM8	100	80.208	Gopherus_agassizii
ENSOMEG00000022509	lsm8	100	81.250	ENSGGOG00000041883	LSM8	100	80.208	Gorilla_gorilla
ENSOMEG00000022509	lsm8	100	86.458	ENSHBUG00000003646	lsm8	100	85.417	Haplochromis_burtoni
ENSOMEG00000022509	lsm8	69	76.471	ENSHGLG00000001988	-	99	76.471	Heterocephalus_glaber_female
ENSOMEG00000022509	lsm8	100	76.042	ENSHGLG00000019782	-	100	76.042	Heterocephalus_glaber_female
ENSOMEG00000022509	lsm8	100	77.083	ENSHGLG00100012166	-	100	76.042	Heterocephalus_glaber_male
ENSOMEG00000022509	lsm8	98	79.787	ENSHGLG00100003934	-	94	78.723	Heterocephalus_glaber_male
ENSOMEG00000022509	lsm8	100	85.417	ENSHCOG00000005037	lsm8	100	85.417	Hippocampus_comes
ENSOMEG00000022509	lsm8	100	85.417	ENSIPUG00000019811	NAA38	100	84.375	Ictalurus_punctatus
ENSOMEG00000022509	lsm8	83	80.000	ENSSTOG00000034801	-	64	82.609	Ictidomys_tridecemlineatus
ENSOMEG00000022509	lsm8	100	81.250	ENSSTOG00000009039	LSM8	100	80.208	Ictidomys_tridecemlineatus
ENSOMEG00000022509	lsm8	100	81.250	ENSJJAG00000009031	Lsm8	99	80.208	Jaculus_jaculus
ENSOMEG00000022509	lsm8	100	86.458	ENSKMAG00000018983	lsm8	100	85.417	Kryptolebias_marmoratus
ENSOMEG00000022509	lsm8	100	81.250	ENSLACG00000010231	LSM8	100	80.208	Latimeria_chalumnae
ENSOMEG00000022509	lsm8	100	84.375	ENSLOCG00000015580	lsm8	100	83.333	Lepisosteus_oculatus
ENSOMEG00000022509	lsm8	100	80.412	ENSLAFG00000011242	LSM8	100	79.381	Loxodonta_africana
ENSOMEG00000022509	lsm8	100	78.125	ENSMFAG00000013044	-	100	77.083	Macaca_fascicularis
ENSOMEG00000022509	lsm8	100	81.250	ENSMFAG00000035798	LSM8	93	97.101	Macaca_fascicularis
ENSOMEG00000022509	lsm8	100	81.250	ENSMMUG00000046401	LSM8	93	97.101	Macaca_mulatta
ENSOMEG00000022509	lsm8	100	81.250	ENSMNEG00000036764	-	93	97.101	Macaca_nemestrina
ENSOMEG00000022509	lsm8	83	90.667	ENSMNEG00000011141	-	92	94.203	Macaca_nemestrina
ENSOMEG00000022509	lsm8	100	81.250	ENSMLEG00000035828	-	93	97.101	Mandrillus_leucophaeus
ENSOMEG00000022509	lsm8	100	68.750	ENSMLEG00000039324	-	100	68.750	Mandrillus_leucophaeus
ENSOMEG00000022509	lsm8	83	96.000	ENSMAMG00000018839	lsm8	92	100.000	Mastacembelus_armatus
ENSOMEG00000022509	lsm8	100	86.458	ENSMZEG00005019138	lsm8	100	85.417	Maylandia_zebra
ENSOMEG00000022509	lsm8	100	82.292	ENSMGAG00000008808	LSM8	100	81.250	Meleagris_gallopavo
ENSOMEG00000022509	lsm8	100	75.000	ENSMAUG00000015721	-	100	75.000	Mesocricetus_auratus
ENSOMEG00000022509	lsm8	82	89.189	ENSMAUG00000020287	-	93	89.855	Mesocricetus_auratus
ENSOMEG00000022509	lsm8	100	63.542	ENSMAUG00000015356	-	100	63.542	Mesocricetus_auratus
ENSOMEG00000022509	lsm8	100	81.250	ENSMICG00000042730	LSM8	100	80.208	Microcebus_murinus
ENSOMEG00000022509	lsm8	100	81.250	ENSMOCG00000001688	Lsm8	100	80.208	Microtus_ochrogaster
ENSOMEG00000022509	lsm8	83	96.000	ENSMMOG00000006046	lsm8	92	100.000	Mola_mola
ENSOMEG00000022509	lsm8	81	81.333	ENSMODG00000015729	LSM8	88	84.058	Monodelphis_domestica
ENSOMEG00000022509	lsm8	100	86.458	ENSMALG00000000405	lsm8	100	85.417	Monopterus_albus
ENSOMEG00000022509	lsm8	100	81.250	MGP_CAROLIEiJ_G0028125	-	100	80.208	Mus_caroli
ENSOMEG00000022509	lsm8	100	81.250	ENSMUSG00000044155	Lsm8	100	80.208	Mus_musculus
ENSOMEG00000022509	lsm8	100	81.250	MGP_PahariEiJ_G0021881	Lsm8	92	97.101	Mus_pahari
ENSOMEG00000022509	lsm8	100	81.250	MGP_SPRETEiJ_G0029125	-	100	80.208	Mus_spretus
ENSOMEG00000022509	lsm8	100	80.208	ENSMLUG00000027762	-	100	79.167	Myotis_lucifugus
ENSOMEG00000022509	lsm8	100	81.250	ENSMLUG00000006837	-	100	80.208	Myotis_lucifugus
ENSOMEG00000022509	lsm8	100	81.250	ENSNGAG00000016554	Lsm8	100	80.208	Nannospalax_galili
ENSOMEG00000022509	lsm8	100	86.458	ENSNBRG00000014441	lsm8	100	85.417	Neolamprologus_brichardi
ENSOMEG00000022509	lsm8	100	81.250	ENSNLEG00000011768	LSM8	100	80.208	Nomascus_leucogenys
ENSOMEG00000022509	lsm8	100	70.833	ENSMEUG00000007801	LSM8	100	70.833	Notamacropus_eugenii
ENSOMEG00000022509	lsm8	83	93.333	ENSOPRG00000014809	LSM8	81	97.101	Ochotona_princeps
ENSOMEG00000022509	lsm8	89	63.953	ENSODEG00000020290	-	100	62.791	Octodon_degus
ENSOMEG00000022509	lsm8	100	81.250	ENSODEG00000000418	-	100	80.208	Octodon_degus
ENSOMEG00000022509	lsm8	100	80.208	ENSOANG00000014536	LSM8	100	79.167	Ornithorhynchus_anatinus
ENSOMEG00000022509	lsm8	100	80.412	ENSOCUG00000017359	LSM8	100	79.381	Oryctolagus_cuniculus
ENSOMEG00000022509	lsm8	100	89.362	ENSORLG00000017432	lsm8	100	88.298	Oryzias_latipes
ENSOMEG00000022509	lsm8	100	89.362	ENSORLG00020004376	lsm8	100	88.298	Oryzias_latipes_hni
ENSOMEG00000022509	lsm8	100	92.708	ENSORLG00015003757	lsm8	100	92.708	Oryzias_latipes_hsok
ENSOMEG00000022509	lsm8	100	81.250	ENSOGAG00000013377	LSM8	100	80.208	Otolemur_garnettii
ENSOMEG00000022509	lsm8	100	81.250	ENSOARG00000017974	LSM8	100	80.208	Ovis_aries
ENSOMEG00000022509	lsm8	83	93.333	ENSPPAG00000043228	-	92	97.101	Pan_paniscus
ENSOMEG00000022509	lsm8	100	81.250	ENSPPRG00000006444	LSM8	100	80.208	Panthera_pardus
ENSOMEG00000022509	lsm8	100	81.250	ENSPTIG00000004722	LSM8	100	80.208	Panthera_tigris_altaica
ENSOMEG00000022509	lsm8	83	93.333	ENSPTRG00000046596	-	92	97.101	Pan_troglodytes
ENSOMEG00000022509	lsm8	100	76.042	ENSPANG00000019395	-	100	75.000	Papio_anubis
ENSOMEG00000022509	lsm8	100	81.250	ENSPANG00000035470	-	93	97.101	Papio_anubis
ENSOMEG00000022509	lsm8	83	93.333	ENSPKIG00000006092	lsm8	70	97.101	Paramormyrops_kingsleyae
ENSOMEG00000022509	lsm8	83	93.333	ENSPSIG00000017054	LSM8	92	97.101	Pelodiscus_sinensis
ENSOMEG00000022509	lsm8	83	96.000	ENSPMGG00000016442	lsm8	92	100.000	Periophthalmus_magnuspinnatus
ENSOMEG00000022509	lsm8	82	95.946	ENSPEMG00000009153	Lsm8	93	97.101	Peromyscus_maniculatus_bairdii
ENSOMEG00000022509	lsm8	97	81.720	ENSPCIG00000021467	LSM8	98	80.645	Phascolarctos_cinereus
ENSOMEG00000022509	lsm8	100	85.417	ENSPFOG00000012340	lsm8	100	84.375	Poecilia_formosa
ENSOMEG00000022509	lsm8	83	94.667	ENSPLAG00000000516	lsm8	72	98.551	Poecilia_latipinna
ENSOMEG00000022509	lsm8	100	85.417	ENSPMEG00000022567	lsm8	100	84.375	Poecilia_mexicana
ENSOMEG00000022509	lsm8	81	88.750	ENSPREG00000005527	lsm8	72	88.750	Poecilia_reticulata
ENSOMEG00000022509	lsm8	100	81.250	ENSPPYG00000017942	LSM8	100	80.208	Pongo_abelii
ENSOMEG00000022509	lsm8	99	61.053	ENSPCOG00000017982	-	97	62.366	Propithecus_coquereli
ENSOMEG00000022509	lsm8	100	81.250	ENSPCOG00000003309	-	100	80.208	Propithecus_coquereli
ENSOMEG00000022509	lsm8	83	92.000	ENSPVAG00000000990	LSM8	81	95.652	Pteropus_vampyrus
ENSOMEG00000022509	lsm8	100	86.458	ENSPNYG00000011448	lsm8	100	85.417	Pundamilia_nyererei
ENSOMEG00000022509	lsm8	100	85.417	ENSPNAG00000010252	lsm8	100	84.375	Pygocentrus_nattereri
ENSOMEG00000022509	lsm8	100	81.250	ENSRNOG00000058677	Lsm8	100	80.208	Rattus_norvegicus
ENSOMEG00000022509	lsm8	100	81.250	ENSRBIG00000032851	LSM8	93	97.101	Rhinopithecus_bieti
ENSOMEG00000022509	lsm8	100	81.250	ENSRROG00000039618	LSM8	93	97.101	Rhinopithecus_roxellana
ENSOMEG00000022509	lsm8	100	81.250	ENSSBOG00000023223	LSM8	93	97.101	Saimiri_boliviensis_boliviensis
ENSOMEG00000022509	lsm8	100	81.250	ENSSHAG00000018435	-	100	80.208	Sarcophilus_harrisii
ENSOMEG00000022509	lsm8	100	83.333	ENSSFOG00015004412	lsm8	100	82.292	Scleropages_formosus
ENSOMEG00000022509	lsm8	83	93.333	ENSSMAG00000009458	lsm8	92	97.101	Scophthalmus_maximus
ENSOMEG00000022509	lsm8	100	86.458	ENSSDUG00000014702	lsm8	100	85.417	Seriola_dumerili
ENSOMEG00000022509	lsm8	83	96.000	ENSSLDG00000016870	lsm8	92	100.000	Seriola_lalandi_dorsalis
ENSOMEG00000022509	lsm8	80	97.222	ENSSARG00000009628	-	100	97.222	Sorex_araneus
ENSOMEG00000022509	lsm8	100	81.250	ENSSPUG00000017419	LSM8	100	80.208	Sphenodon_punctatus
ENSOMEG00000022509	lsm8	100	86.458	ENSSPAG00000021422	lsm8	100	85.417	Stegastes_partitus
ENSOMEG00000022509	lsm8	100	81.250	ENSSSCG00000021652	LSM8	100	80.208	Sus_scrofa
ENSOMEG00000022509	lsm8	100	82.292	ENSTGUG00000004730	-	100	81.250	Taeniopygia_guttata
ENSOMEG00000022509	lsm8	100	81.250	ENSTGUG00000016823	-	100	80.208	Taeniopygia_guttata
ENSOMEG00000022509	lsm8	100	86.458	ENSTRUG00000025192	lsm8	100	85.417	Takifugu_rubripes
ENSOMEG00000022509	lsm8	100	86.458	ENSTNIG00000002864	lsm8	100	85.417	Tetraodon_nigroviridis
ENSOMEG00000022509	lsm8	100	81.250	ENSTTRG00000001023	LSM8	100	80.208	Tursiops_truncatus
ENSOMEG00000022509	lsm8	83	93.333	ENSUAMG00000006943	-	72	97.101	Ursus_americanus
ENSOMEG00000022509	lsm8	83	93.333	ENSUMAG00000003073	LSM8	73	97.101	Ursus_maritimus
ENSOMEG00000022509	lsm8	100	81.250	ENSVPAG00000001530	LSM8	100	80.208	Vicugna_pacos
ENSOMEG00000022509	lsm8	84	90.789	ENSVVUG00000013248	-	76	94.203	Vulpes_vulpes
ENSOMEG00000022509	lsm8	92	82.022	ENSXETG00000021829	lsm8	71	97.101	Xenopus_tropicalis
ENSOMEG00000022509	lsm8	100	84.211	ENSXCOG00000012938	lsm8	100	84.211	Xiphophorus_couchianus
ENSOMEG00000022509	lsm8	100	85.417	ENSXMAG00000025919	lsm8	100	84.375	Xiphophorus_maculatus