EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000022678 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3543 bases
Position: chrNVQA01000001.1:13735640-13739182
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000035420	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000036269	-	1287	-	ENSOMEP00000035420	163 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000022678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000022678	-	90	65.306	ENSOMEG00000020821	ARF5	82	65.306
ENSOMEG00000022678	-	87	32.895	ENSOMEG00000001352	arfrp1	76	32.895
ENSOMEG00000022678	-	88	57.639	ENSOMEG00000023497	arl1	77	57.639
ENSOMEG00000022678	-	83	47.794	ENSOMEG00000005057	arl3l2	73	47.794
ENSOMEG00000022678	-	80	35.075	ENSOMEG00000023727	ARL10	53	35.075
ENSOMEG00000022678	-	88	70.833	ENSOMEG00000007598	-	80	70.833
ENSOMEG00000022678	-	90	44.000	ENSOMEG00000003634	arl8	84	44.000
ENSOMEG00000022678	-	91	69.595	ENSOMEG00000017070	-	82	69.595
ENSOMEG00000022678	-	88	46.622	ENSOMEG00000003868	arl4aa	76	46.622
ENSOMEG00000022678	-	84	45.985	ENSOMEG00000003861	-	75	45.985
ENSOMEG00000022678	-	73	30.000	ENSOMEG00000010692	rab5aa	58	30.000
ENSOMEG00000022678	-	82	38.806	ENSOMEG00000007419	arl11	74	38.806
ENSOMEG00000022678	-	82	44.928	ENSOMEG00000004308	arl4d	68	44.928
ENSOMEG00000022678	-	87	45.890	ENSOMEG00000007253	arl4cb	76	45.890
ENSOMEG00000022678	-	83	42.857	ENSOMEG00000017204	ARL6	77	42.857
ENSOMEG00000022678	-	91	37.086	ENSOMEG00000023857	arl8bb	80	39.007
ENSOMEG00000022678	-	74	39.024	ENSOMEG00000012020	-	61	39.024
ENSOMEG00000022678	-	84	43.066	ENSOMEG00000021718	arl5c	77	43.066
ENSOMEG00000022678	-	80	35.338	ENSOMEG00000004948	sar1ab	66	35.338
ENSOMEG00000022678	-	93	34.416	ENSOMEG00000001959	arl8ba	83	34.416
ENSOMEG00000022678	-	88	41.216	ENSOMEG00000016904	arl14	80	41.216
ENSOMEG00000022678	-	91	68.243	ENSOMEG00000002559	arf2b	82	68.243
ENSOMEG00000022678	-	80	38.346	ENSOMEG00000001052	sar1b	66	38.346
ENSOMEG00000022678	-	83	40.000	ENSOMEG00000023152	-	71	40.000
ENSOMEG00000022678	-	84	48.905	ENSOMEG00000007691	arl3	79	49.630
ENSOMEG00000022678	-	85	34.752	ENSOMEG00000010187	arl13b	56	34.752
ENSOMEG00000022678	-	88	44.056	ENSOMEG00000017228	arl5a	80	44.056
ENSOMEG00000022678	-	98	61.006	ENSOMEG00000000211	-	56	61.006
ENSOMEG00000022678	-	84	47.826	ENSOMEG00000008521	arl2	74	47.826
ENSOMEG00000022678	-	91	66.892	ENSOMEG00000023784	-	82	66.892
ENSOMEG00000022678	-	91	69.595	ENSOMEG00000009575	arf3b	82	69.595

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022678	-	94	96.732	ENSATEG00000000391	-	94	96.732	Anabas_testudineus
ENSOMEG00000022678	-	91	100.000	ENSACLG00000022869	-	94	100.000	Astatotilapia_calliptera
ENSOMEG00000022678	-	85	100.000	ENSELUG00000000436	-	87	100.000	Esox_lucius
ENSOMEG00000022678	-	91	100.000	ENSIPUG00000020344	-	92	100.000	Ictalurus_punctatus
ENSOMEG00000022678	-	91	100.000	ENSONIG00000000864	-	95	100.000	Oreochromis_niloticus
ENSOMEG00000022678	-	85	99.281	ENSORLG00015004028	-	89	99.281	Oryzias_latipes_hsok
ENSOMEG00000022678	-	85	100.000	ENSPLAG00000007217	-	95	100.000	Poecilia_latipinna
ENSOMEG00000022678	-	83	95.588	ENSPMEG00000017081	-	86	95.588	Poecilia_mexicana
ENSOMEG00000022678	-	86	98.571	ENSTRUG00000024749	-	100	98.571	Takifugu_rubripes
ENSOMEG00000022678	-	91	95.946	ENSTRUG00000020509	-	77	95.946	Takifugu_rubripes
ENSOMEG00000022678	-	85	100.000	ENSXMAG00000028437	-	91	100.000	Xiphophorus_maculatus