EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000022688 (Gene tree)
Gene ID: 112160484
Gene Symbol: gpatch1
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 8230 bases
Position: chrNVQA01000027.1:421238-429467
Accession: 112160484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000020770	DUF1604	PF07713.13	7.5e-37	1	1
ENSOMEP00000020786	DUF1604	PF07713.13	7.7e-37	1	1
ENSOMEP00000020786	G-patch	PF01585.23	1.5e-06	1	1
ENSOMEP00000020770	G-patch	PF01585.23	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000030309	-	3727	-	ENSOMEP00000020770	928 (aa)	XP_024150811	UPI000CF7BCF1
ENSOMET00000030326	-	3793	-	ENSOMEP00000020786	950 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000022688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022688's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022688	gpatch1	90	50.691	ENSG00000076650	GPATCH1	81	70.192	Homo_sapiens
ENSOMEG00000022688	gpatch1	90	50.694	ENSAMEG00000015575	GPATCH1	89	49.190	Ailuropoda_melanoleuca
ENSOMEG00000022688	gpatch1	82	82.967	ENSAOCG00000006668	gpatch1	79	82.967	Amphiprion_ocellaris
ENSOMEG00000022688	gpatch1	99	66.354	ENSAPEG00000000026	gpatch1	92	66.742	Amphiprion_percula
ENSOMEG00000022688	gpatch1	92	69.222	ENSATEG00000014494	gpatch1	91	69.187	Anabas_testudineus
ENSOMEG00000022688	gpatch1	90	51.515	ENSANAG00000027002	GPATCH1	90	49.364	Aotus_nancymaae
ENSOMEG00000022688	gpatch1	86	72.073	ENSACLG00000024740	gpatch1	86	69.787	Astatotilapia_calliptera
ENSOMEG00000022688	gpatch1	92	56.216	ENSAMXG00000020177	gpatch1	77	62.102	Astyanax_mexicanus
ENSOMEG00000022688	gpatch1	90	50.000	ENSBTAG00000000721	GPATCH1	90	49.592	Bos_taurus
ENSOMEG00000022688	gpatch1	51	62.745	WBGene00011109	R07E5.1	62	33.544	Caenorhabditis_elegans
ENSOMEG00000022688	gpatch1	90	51.636	ENSCJAG00000000684	GPATCH1	90	49.594	Callithrix_jacchus
ENSOMEG00000022688	gpatch1	90	51.217	ENSCAFG00000007457	GPATCH1	75	49.769	Canis_familiaris
ENSOMEG00000022688	gpatch1	94	49.888	ENSCAFG00020019731	GPATCH1	90	49.769	Canis_lupus_dingo
ENSOMEG00000022688	gpatch1	90	50.461	ENSCHIG00000019626	GPATCH1	92	49.766	Capra_hircus
ENSOMEG00000022688	gpatch1	87	48.452	ENSCAPG00000008827	GPATCH1	89	47.670	Cavia_aperea
ENSOMEG00000022688	gpatch1	89	49.708	ENSCPOG00000024477	GPATCH1	89	49.355	Cavia_porcellus
ENSOMEG00000022688	gpatch1	90	50.696	ENSCCAG00000024676	GPATCH1	90	49.416	Cebus_capucinus
ENSOMEG00000022688	gpatch1	90	50.461	ENSCATG00000043637	GPATCH1	81	69.231	Cercocebus_atys
ENSOMEG00000022688	gpatch1	91	49.828	ENSCLAG00000003395	-	90	49.515	Chinchilla_lanigera
ENSOMEG00000022688	gpatch1	90	49.139	ENSCSAG00000004743	GPATCH1	90	47.876	Chlorocebus_sabaeus
ENSOMEG00000022688	gpatch1	83	42.893	ENSCHOG00000012865	GPATCH1	89	41.340	Choloepus_hoffmanni
ENSOMEG00000022688	gpatch1	79	51.596	ENSCPBG00000000666	GPATCH1	92	51.330	Chrysemys_picta_bellii
ENSOMEG00000022688	gpatch1	91	32.952	ENSCING00000012518	-	74	35.000	Ciona_intestinalis
ENSOMEG00000022688	gpatch1	79	51.713	ENSCANG00000012540	GPATCH1	88	48.758	Colobus_angolensis_palliatus
ENSOMEG00000022688	gpatch1	87	51.196	ENSCGRG00001016736	Gpatch1	89	48.047	Cricetulus_griseus_chok1gshd
ENSOMEG00000022688	gpatch1	79	45.684	ENSCGRG00000005069	Gpatch1	69	45.319	Cricetulus_griseus_crigri
ENSOMEG00000022688	gpatch1	85	61.505	ENSCSEG00000019456	-	98	64.964	Cynoglossus_semilaevis
ENSOMEG00000022688	gpatch1	82	59.574	ENSDARG00000033418	gpatch1	72	62.151	Danio_rerio
ENSOMEG00000022688	gpatch1	89	50.829	ENSDNOG00000005291	GPATCH1	93	49.763	Dasypus_novemcinctus
ENSOMEG00000022688	gpatch1	89	48.642	ENSDORG00000012546	Gpatch1	76	50.941	Dipodomys_ordii
ENSOMEG00000022688	gpatch1	60	38.117	FBgn0036386	CG8833	67	32.221	Drosophila_melanogaster
ENSOMEG00000022688	gpatch1	90	47.264	ENSETEG00000003626	GPATCH1	72	52.616	Echinops_telfairi
ENSOMEG00000022688	gpatch1	96	36.585	ENSEBUG00000011286	gpatch1	73	41.384	Eptatretus_burgeri
ENSOMEG00000022688	gpatch1	90	50.935	ENSEASG00005021162	GPATCH1	91	49.536	Equus_asinus_asinus
ENSOMEG00000022688	gpatch1	90	49.826	ENSECAG00000022743	GPATCH1	87	49.536	Equus_caballus
ENSOMEG00000022688	gpatch1	73	52.941	ENSEEUG00000012925	GPATCH1	65	53.000	Erinaceus_europaeus
ENSOMEG00000022688	gpatch1	99	55.769	ENSELUG00000018195	gpatch1	89	58.277	Esox_lucius
ENSOMEG00000022688	gpatch1	90	48.837	ENSFCAG00000014917	GPATCH1	89	48.727	Felis_catus
ENSOMEG00000022688	gpatch1	92	48.256	ENSFALG00000007821	GPATCH1	72	52.149	Ficedula_albicollis
ENSOMEG00000022688	gpatch1	87	51.501	ENSFDAG00000003871	GPATCH1	90	50.060	Fukomys_damarensis
ENSOMEG00000022688	gpatch1	84	62.269	ENSGMOG00000003830	gpatch1	96	61.574	Gadus_morhua
ENSOMEG00000022688	gpatch1	93	47.991	ENSGALG00000004839	GPATCH1	94	48.454	Gallus_gallus
ENSOMEG00000022688	gpatch1	90	65.851	ENSGACG00000017544	gpatch1	93	65.658	Gasterosteus_aculeatus
ENSOMEG00000022688	gpatch1	89	50.530	ENSGAGG00000010067	GPATCH1	89	48.601	Gopherus_agassizii
ENSOMEG00000022688	gpatch1	87	50.357	ENSGGOG00000010862	GPATCH1	89	48.571	Gorilla_gorilla
ENSOMEG00000022688	gpatch1	91	69.875	ENSHBUG00000023462	gpatch1	92	69.074	Haplochromis_burtoni
ENSOMEG00000022688	gpatch1	89	50.943	ENSHGLG00000009334	GPATCH1	89	49.410	Heterocephalus_glaber_female
ENSOMEG00000022688	gpatch1	89	50.825	ENSHGLG00100018074	GPATCH1	89	49.292	Heterocephalus_glaber_male
ENSOMEG00000022688	gpatch1	94	56.311	ENSIPUG00000014977	gpatch1	90	56.370	Ictalurus_punctatus
ENSOMEG00000022688	gpatch1	90	48.308	ENSSTOG00000003720	GPATCH1	89	48.595	Ictidomys_tridecemlineatus
ENSOMEG00000022688	gpatch1	90	51.152	ENSJJAG00000023765	Gpatch1	90	49.883	Jaculus_jaculus
ENSOMEG00000022688	gpatch1	99	66.282	ENSKMAG00000017950	gpatch1	92	68.265	Kryptolebias_marmoratus
ENSOMEG00000022688	gpatch1	92	67.220	ENSLBEG00000026527	gpatch1	89	68.090	Labrus_bergylta
ENSOMEG00000022688	gpatch1	88	51.479	ENSLACG00000008130	GPATCH1	90	50.769	Latimeria_chalumnae
ENSOMEG00000022688	gpatch1	82	58.503	ENSLOCG00000001800	gpatch1	90	54.920	Lepisosteus_oculatus
ENSOMEG00000022688	gpatch1	90	51.639	ENSLAFG00000013589	GPATCH1	89	49.360	Loxodonta_africana
ENSOMEG00000022688	gpatch1	90	50.633	ENSMFAG00000034418	GPATCH1	81	69.231	Macaca_fascicularis
ENSOMEG00000022688	gpatch1	90	50.861	ENSMMUG00000011790	GPATCH1	81	70.192	Macaca_mulatta
ENSOMEG00000022688	gpatch1	90	50.288	ENSMNEG00000045084	GPATCH1	81	67.308	Macaca_nemestrina
ENSOMEG00000022688	gpatch1	90	43.088	ENSMLEG00000043840	GPATCH1	88	42.069	Mandrillus_leucophaeus
ENSOMEG00000022688	gpatch1	86	71.951	ENSMZEG00005001926	gpatch1	87	69.847	Maylandia_zebra
ENSOMEG00000022688	gpatch1	91	49.424	ENSMGAG00000005775	GPATCH1	91	48.624	Meleagris_gallopavo
ENSOMEG00000022688	gpatch1	89	43.927	ENSMICG00000004829	GPATCH1	92	44.574	Microcebus_murinus
ENSOMEG00000022688	gpatch1	90	50.577	ENSMOCG00000000174	Gpatch1	90	48.904	Microtus_ochrogaster
ENSOMEG00000022688	gpatch1	86	66.348	ENSMMOG00000002140	gpatch1	93	64.795	Mola_mola
ENSOMEG00000022688	gpatch1	90	50.234	ENSMODG00000012226	GPATCH1	89	49.180	Monodelphis_domestica
ENSOMEG00000022688	gpatch1	99	65.474	ENSMALG00000014386	gpatch1	72	74.818	Monopterus_albus
ENSOMEG00000022688	gpatch1	95	48.616	ENSMUSG00000063808	Gpatch1	98	71.875	Mus_musculus
ENSOMEG00000022688	gpatch1	95	48.948	MGP_PahariEiJ_G0012816	Gpatch1	98	72.917	Mus_pahari
ENSOMEG00000022688	gpatch1	95	47.965	MGP_SPRETEiJ_G0030681	Gpatch1	98	72.917	Mus_spretus
ENSOMEG00000022688	gpatch1	90	50.584	ENSMPUG00000007658	GPATCH1	89	49.065	Mustela_putorius_furo
ENSOMEG00000022688	gpatch1	90	50.349	ENSMLUG00000012161	GPATCH1	90	48.252	Myotis_lucifugus
ENSOMEG00000022688	gpatch1	90	50.935	ENSNGAG00000012455	Gpatch1	90	49.182	Nannospalax_galili
ENSOMEG00000022688	gpatch1	90	50.699	ENSNLEG00000007659	GPATCH1	81	70.192	Nomascus_leucogenys
ENSOMEG00000022688	gpatch1	78	45.061	ENSMEUG00000015174	GPATCH1	73	46.705	Notamacropus_eugenii
ENSOMEG00000022688	gpatch1	89	50.349	ENSODEG00000007103	GPATCH1	89	50.058	Octodon_degus
ENSOMEG00000022688	gpatch1	92	69.899	ENSONIG00000003302	gpatch1	92	70.208	Oreochromis_niloticus
ENSOMEG00000022688	gpatch1	99	48.374	ENSOANG00000012732	GPATCH1	89	50.234	Ornithorhynchus_anatinus
ENSOMEG00000022688	gpatch1	90	51.688	ENSOCUG00000015905	GPATCH1	90	50.762	Oryctolagus_cuniculus
ENSOMEG00000022688	gpatch1	100	83.854	ENSORLG00000018706	gpatch1	100	81.562	Oryzias_latipes
ENSOMEG00000022688	gpatch1	84	51.511	ENSOGAG00000004016	GPATCH1	87	52.841	Otolemur_garnettii
ENSOMEG00000022688	gpatch1	90	50.939	ENSOARG00000004365	GPATCH1	89	50.352	Ovis_aries
ENSOMEG00000022688	gpatch1	90	50.463	ENSPPAG00000020990	GPATCH1	81	69.524	Pan_paniscus
ENSOMEG00000022688	gpatch1	90	48.605	ENSPPRG00000017245	GPATCH1	89	48.260	Panthera_pardus
ENSOMEG00000022688	gpatch1	90	49.131	ENSPTIG00000019649	GPATCH1	89	48.953	Panthera_tigris_altaica
ENSOMEG00000022688	gpatch1	90	50.463	ENSPTRG00000010803	GPATCH1	81	70.192	Pan_troglodytes
ENSOMEG00000022688	gpatch1	94	49.111	ENSPANG00000012374	GPATCH1	81	69.231	Papio_anubis
ENSOMEG00000022688	gpatch1	81	60.026	ENSPKIG00000020745	gpatch1	90	55.850	Paramormyrops_kingsleyae
ENSOMEG00000022688	gpatch1	90	49.942	ENSPSIG00000013433	GPATCH1	89	49.129	Pelodiscus_sinensis
ENSOMEG00000022688	gpatch1	90	50.696	ENSPEMG00000000636	Gpatch1	90	50.117	Peromyscus_maniculatus_bairdii
ENSOMEG00000022688	gpatch1	95	48.840	ENSPCIG00000021003	GPATCH1	98	48.556	Phascolarctos_cinereus
ENSOMEG00000022688	gpatch1	72	63.490	ENSPREG00000008264	gpatch1	80	63.636	Poecilia_reticulata
ENSOMEG00000022688	gpatch1	90	49.361	ENSPPYG00000009824	GPATCH1	89	47.926	Pongo_abelii
ENSOMEG00000022688	gpatch1	73	50.142	ENSPCAG00000005931	GPATCH1	75	48.148	Procavia_capensis
ENSOMEG00000022688	gpatch1	92	48.963	ENSPCOG00000009674	GPATCH1	94	47.206	Propithecus_coquereli
ENSOMEG00000022688	gpatch1	76	51.532	ENSPVAG00000017767	GPATCH1	73	51.220	Pteropus_vampyrus
ENSOMEG00000022688	gpatch1	86	72.727	ENSPNYG00000018189	gpatch1	96	70.918	Pundamilia_nyererei
ENSOMEG00000022688	gpatch1	90	57.000	ENSPNAG00000013187	gpatch1	91	55.272	Pygocentrus_nattereri
ENSOMEG00000022688	gpatch1	90	50.464	ENSRNOG00000011584	Gpatch1	89	49.825	Rattus_norvegicus
ENSOMEG00000022688	gpatch1	90	44.914	ENSRBIG00000034723	GPATCH1	91	43.743	Rhinopithecus_bieti
ENSOMEG00000022688	gpatch1	90	50.171	ENSRROG00000024428	GPATCH1	81	68.269	Rhinopithecus_roxellana
ENSOMEG00000022688	gpatch1	90	50.996	ENSSBOG00000034650	GPATCH1	90	49.242	Saimiri_boliviensis_boliviensis
ENSOMEG00000022688	gpatch1	90	49.767	ENSSHAG00000016016	GPATCH1	90	48.208	Sarcophilus_harrisii
ENSOMEG00000022688	gpatch1	91	58.545	ENSSFOG00015011535	gpatch1	89	58.668	Scleropages_formosus
ENSOMEG00000022688	gpatch1	99	60.456	ENSSMAG00000002883	gpatch1	86	70.532	Scophthalmus_maximus
ENSOMEG00000022688	gpatch1	93	67.802	ENSSDUG00000007444	gpatch1	91	68.444	Seriola_dumerili
ENSOMEG00000022688	gpatch1	82	73.096	ENSSLDG00000002856	gpatch1	96	70.082	Seriola_lalandi_dorsalis
ENSOMEG00000022688	gpatch1	74	53.712	ENSSARG00000004108	GPATCH1	72	53.478	Sorex_araneus
ENSOMEG00000022688	gpatch1	90	49.712	ENSSSCG00000002865	GPATCH1	92	49.651	Sus_scrofa
ENSOMEG00000022688	gpatch1	92	48.335	ENSTGUG00000009401	GPATCH1	74	52.518	Taeniopygia_guttata
ENSOMEG00000022688	gpatch1	82	70.773	ENSTRUG00000005785	-	93	63.901	Takifugu_rubripes
ENSOMEG00000022688	gpatch1	82	70.904	ENSTRUG00000025081	gpatch1	93	64.013	Takifugu_rubripes
ENSOMEG00000022688	gpatch1	82	67.821	ENSTNIG00000002554	gpatch1	88	71.693	Tetraodon_nigroviridis
ENSOMEG00000022688	gpatch1	62	51.136	ENSTBEG00000007750	-	76	51.163	Tupaia_belangeri
ENSOMEG00000022688	gpatch1	90	44.688	ENSTTRG00000012221	GPATCH1	90	43.945	Tursiops_truncatus
ENSOMEG00000022688	gpatch1	90	50.463	ENSUMAG00000014645	GPATCH1	85	68.571	Ursus_maritimus
ENSOMEG00000022688	gpatch1	78	64.740	ENSVPAG00000010313	GPATCH1	84	64.804	Vicugna_pacos
ENSOMEG00000022688	gpatch1	94	50.168	ENSVVUG00000016572	GPATCH1	90	49.769	Vulpes_vulpes
ENSOMEG00000022688	gpatch1	99	43.487	ENSXETG00000018276	gpatch1	94	45.032	Xenopus_tropicalis