EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000022747 (Gene tree)
Gene ID: 112149768
Gene Symbol: sbds
Alias: -
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 5491 bases
Position: chrNVQA01000013.1:25375848-25381338
Accession: 112149768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000020846	SBDS	PF01172.18	1.5e-34	1	1
ENSOMEP00000020846	SBDS_C	PF09377.10	1.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000030405	-	3665	-	ENSOMEP00000020846	249 (aa)	XP_024133468	UPI000CF7E4C9

Gene Model

Click here to download ENSOMEG00000022747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022747's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022747	sbds	100	80.723	ENSG00000126524	SBDS	97	85.542	Homo_sapiens
ENSOMEG00000022747	sbds	100	92.771	ENSAPOG00000014285	sbds	100	92.771	Acanthochromis_polyacanthus
ENSOMEG00000022747	sbds	100	80.723	ENSAMEG00000018167	SBDS	99	80.723	Ailuropoda_melanoleuca
ENSOMEG00000022747	sbds	100	93.651	ENSACIG00000007308	sbds	100	93.651	Amphilophus_citrinellus
ENSOMEG00000022747	sbds	100	93.173	ENSAOCG00000016770	sbds	100	93.173	Amphiprion_ocellaris
ENSOMEG00000022747	sbds	100	93.574	ENSAPEG00000015897	sbds	100	93.574	Amphiprion_percula
ENSOMEG00000022747	sbds	100	92.369	ENSATEG00000006901	sbds	100	92.369	Anabas_testudineus
ENSOMEG00000022747	sbds	83	79.612	ENSANAG00000037501	-	99	79.612	Aotus_nancymaae
ENSOMEG00000022747	sbds	93	75.758	ENSANAG00000024342	-	95	78.313	Aotus_nancymaae
ENSOMEG00000022747	sbds	100	93.976	ENSACLG00000018750	sbds	100	93.976	Astatotilapia_calliptera
ENSOMEG00000022747	sbds	100	86.747	ENSAMXG00000005361	sbds	99	86.747	Astyanax_mexicanus
ENSOMEG00000022747	sbds	100	81.124	ENSBTAG00000004051	SBDS	99	81.124	Bos_taurus
ENSOMEG00000022747	sbds	98	60.163	WBGene00021063	sbds-1	97	60.163	Caenorhabditis_elegans
ENSOMEG00000022747	sbds	100	80.723	ENSCJAG00000041007	SBDS	99	80.723	Callithrix_jacchus
ENSOMEG00000022747	sbds	100	79.283	ENSCAFG00000010797	SBDS	99	79.283	Canis_familiaris
ENSOMEG00000022747	sbds	100	80.723	ENSCAFG00020005357	SBDS	99	80.723	Canis_lupus_dingo
ENSOMEG00000022747	sbds	100	81.124	ENSCHIG00000026854	SBDS	99	81.124	Capra_hircus
ENSOMEG00000022747	sbds	100	80.723	ENSTSYG00000033822	SBDS	99	80.723	Carlito_syrichta
ENSOMEG00000022747	sbds	65	79.755	ENSCAPG00000006634	SBDS	99	79.755	Cavia_aperea
ENSOMEG00000022747	sbds	100	81.928	ENSCPOG00000036143	SBDS	99	81.928	Cavia_porcellus
ENSOMEG00000022747	sbds	100	80.723	ENSCCAG00000020671	SBDS	99	80.723	Cebus_capucinus
ENSOMEG00000022747	sbds	100	80.723	ENSCATG00000039026	SBDS	99	80.723	Cercocebus_atys
ENSOMEG00000022747	sbds	99	58.065	ENSCLAG00000002113	-	99	58.065	Chinchilla_lanigera
ENSOMEG00000022747	sbds	100	82.329	ENSCLAG00000005721	-	99	82.329	Chinchilla_lanigera
ENSOMEG00000022747	sbds	100	80.723	ENSCSAG00000018275	SBDS	99	80.723	Chlorocebus_sabaeus
ENSOMEG00000022747	sbds	100	76.305	ENSCHOG00000003795	SBDS	99	76.305	Choloepus_hoffmanni
ENSOMEG00000022747	sbds	100	83.936	ENSCPBG00000014893	SBDS	99	83.936	Chrysemys_picta_bellii
ENSOMEG00000022747	sbds	99	69.355	ENSCSAVG00000011811	-	99	69.355	Ciona_savignyi
ENSOMEG00000022747	sbds	100	80.321	ENSCANG00000032368	SBDS	99	80.321	Colobus_angolensis_palliatus
ENSOMEG00000022747	sbds	65	79.755	ENSCGRG00001019886	Sbds	99	79.755	Cricetulus_griseus_chok1gshd
ENSOMEG00000022747	sbds	83	81.068	ENSCGRG00000009211	Sbds	99	81.068	Cricetulus_griseus_crigri
ENSOMEG00000022747	sbds	100	90.763	ENSCSEG00000005798	sbds	100	90.763	Cynoglossus_semilaevis
ENSOMEG00000022747	sbds	100	92.369	ENSCVAG00000001053	sbds	100	92.369	Cyprinodon_variegatus
ENSOMEG00000022747	sbds	100	83.534	ENSDARG00000027803	sbds	99	83.534	Danio_rerio
ENSOMEG00000022747	sbds	100	81.124	ENSDNOG00000041174	SBDS	99	81.124	Dasypus_novemcinctus
ENSOMEG00000022747	sbds	100	82.731	ENSDORG00000026218	Sbds	99	82.731	Dipodomys_ordii
ENSOMEG00000022747	sbds	91	61.842	FBgn0035714	CG8549	98	61.943	Drosophila_melanogaster
ENSOMEG00000022747	sbds	93	59.914	ENSEBUG00000015780	sbds	99	59.914	Eptatretus_burgeri
ENSOMEG00000022747	sbds	100	80.723	ENSEASG00005008821	SBDS	99	80.723	Equus_asinus_asinus
ENSOMEG00000022747	sbds	100	80.723	ENSECAG00000008202	SBDS	99	80.723	Equus_caballus
ENSOMEG00000022747	sbds	84	61.538	ENSEEUG00000004768	SBDS	100	61.538	Erinaceus_europaeus
ENSOMEG00000022747	sbds	100	86.747	ENSELUG00000008382	sbds	99	86.747	Esox_lucius
ENSOMEG00000022747	sbds	100	80.723	ENSFCAG00000022142	SBDS	99	80.723	Felis_catus
ENSOMEG00000022747	sbds	100	85.542	ENSFALG00000013808	SBDS	99	85.542	Ficedula_albicollis
ENSOMEG00000022747	sbds	100	81.928	ENSFDAG00000018947	-	99	81.928	Fukomys_damarensis
ENSOMEG00000022747	sbds	100	89.157	ENSFHEG00000000708	sbds	100	89.157	Fundulus_heteroclitus
ENSOMEG00000022747	sbds	100	87.952	ENSGMOG00000018356	sbds	99	87.952	Gadus_morhua
ENSOMEG00000022747	sbds	100	82.329	ENSGALG00000027989	SBDS	99	82.329	Gallus_gallus
ENSOMEG00000022747	sbds	92	89.130	ENSGAFG00000014204	sbds	100	89.130	Gambusia_affinis
ENSOMEG00000022747	sbds	100	88.353	ENSGACG00000012697	sbds	100	88.353	Gasterosteus_aculeatus
ENSOMEG00000022747	sbds	86	83.568	ENSGAGG00000022402	SBDS	99	83.568	Gopherus_agassizii
ENSOMEG00000022747	sbds	96	62.917	ENSGGOG00000040023	-	92	62.917	Gorilla_gorilla
ENSOMEG00000022747	sbds	100	93.976	ENSHBUG00000002660	sbds	100	93.976	Haplochromis_burtoni
ENSOMEG00000022747	sbds	100	80.321	ENSHGLG00000009671	SBDS	99	80.321	Heterocephalus_glaber_female
ENSOMEG00000022747	sbds	100	80.321	ENSHGLG00100011332	SBDS	99	80.321	Heterocephalus_glaber_male
ENSOMEG00000022747	sbds	100	87.149	ENSHCOG00000018606	sbds	100	87.149	Hippocampus_comes
ENSOMEG00000022747	sbds	100	85.944	ENSIPUG00000006536	sbds	99	85.944	Ictalurus_punctatus
ENSOMEG00000022747	sbds	99	79.352	ENSJJAG00000012033	-	99	79.352	Jaculus_jaculus
ENSOMEG00000022747	sbds	99	59.600	ENSJJAG00000003934	-	99	59.600	Jaculus_jaculus
ENSOMEG00000022747	sbds	100	93.976	ENSKMAG00000018542	sbds	100	93.976	Kryptolebias_marmoratus
ENSOMEG00000022747	sbds	100	91.165	ENSLBEG00000016687	sbds	100	91.165	Labrus_bergylta
ENSOMEG00000022747	sbds	100	70.817	ENSLACG00000018916	SBDS	99	70.817	Latimeria_chalumnae
ENSOMEG00000022747	sbds	100	85.141	ENSLOCG00000004073	sbds	99	85.141	Lepisosteus_oculatus
ENSOMEG00000022747	sbds	100	80.723	ENSLAFG00000008763	SBDS	99	80.723	Loxodonta_africana
ENSOMEG00000022747	sbds	100	80.723	ENSMFAG00000032620	SBDS	99	80.723	Macaca_fascicularis
ENSOMEG00000022747	sbds	100	80.723	ENSMMUG00000045653	SBDS	99	80.723	Macaca_mulatta
ENSOMEG00000022747	sbds	100	80.723	ENSMNEG00000031523	SBDS	99	80.723	Macaca_nemestrina
ENSOMEG00000022747	sbds	100	64.427	ENSMLEG00000036826	SBDS	99	64.427	Mandrillus_leucophaeus
ENSOMEG00000022747	sbds	100	93.173	ENSMAMG00000016062	sbds	100	93.173	Mastacembelus_armatus
ENSOMEG00000022747	sbds	100	93.976	ENSMZEG00005024385	sbds	100	93.976	Maylandia_zebra
ENSOMEG00000022747	sbds	100	82.329	ENSMGAG00000002119	SBDS	99	82.329	Meleagris_gallopavo
ENSOMEG00000022747	sbds	100	66.265	ENSMAUG00000022214	-	100	66.265	Mesocricetus_auratus
ENSOMEG00000022747	sbds	100	81.124	ENSMICG00000014366	SBDS	99	81.124	Microcebus_murinus
ENSOMEG00000022747	sbds	100	81.526	ENSMOCG00000011739	Sbds	99	81.526	Microtus_ochrogaster
ENSOMEG00000022747	sbds	100	80.800	ENSMMOG00000005061	sbds	100	80.800	Mola_mola
ENSOMEG00000022747	sbds	100	82.329	ENSMODG00000006644	SBDS	99	82.329	Monodelphis_domestica
ENSOMEG00000022747	sbds	100	88.353	ENSMALG00000010219	sbds	100	88.353	Monopterus_albus
ENSOMEG00000022747	sbds	100	82.329	MGP_CAROLIEiJ_G0027800	Sbds	98	90.476	Mus_caroli
ENSOMEG00000022747	sbds	100	82.731	ENSMUSG00000025337	Sbds	98	90.476	Mus_musculus
ENSOMEG00000022747	sbds	100	82.329	MGP_PahariEiJ_G0024384	Sbds	98	90.476	Mus_pahari
ENSOMEG00000022747	sbds	100	82.731	MGP_SPRETEiJ_G0028798	Sbds	98	90.476	Mus_spretus
ENSOMEG00000022747	sbds	67	80.838	ENSMPUG00000016192	SBDS	96	80.838	Mustela_putorius_furo
ENSOMEG00000022747	sbds	73	76.243	ENSMLUG00000013575	SBDS	99	76.243	Myotis_lucifugus
ENSOMEG00000022747	sbds	100	81.928	ENSNGAG00000012093	Sbds	99	81.928	Nannospalax_galili
ENSOMEG00000022747	sbds	100	93.976	ENSNBRG00000017027	sbds	100	93.976	Neolamprologus_brichardi
ENSOMEG00000022747	sbds	100	80.723	ENSNLEG00000013288	SBDS	99	80.723	Nomascus_leucogenys
ENSOMEG00000022747	sbds	100	82.731	ENSOPRG00000008721	SBDS	99	82.731	Ochotona_princeps
ENSOMEG00000022747	sbds	100	73.896	ENSODEG00000019253	-	84	73.896	Octodon_degus
ENSOMEG00000022747	sbds	100	62.651	ENSODEG00000000137	-	84	65.462	Octodon_degus
ENSOMEG00000022747	sbds	100	63.052	ENSODEG00000001116	-	99	63.052	Octodon_degus
ENSOMEG00000022747	sbds	100	93.173	ENSONIG00000005874	sbds	100	93.173	Oreochromis_niloticus
ENSOMEG00000022747	sbds	82	80.392	ENSOANG00000007674	-	99	80.392	Ornithorhynchus_anatinus
ENSOMEG00000022747	sbds	100	82.731	ENSOCUG00000003170	SBDS	99	82.731	Oryctolagus_cuniculus
ENSOMEG00000022747	sbds	100	96.787	ENSORLG00000023489	sbds	100	96.787	Oryzias_latipes
ENSOMEG00000022747	sbds	100	97.590	ENSORLG00020019282	sbds	100	97.590	Oryzias_latipes_hni
ENSOMEG00000022747	sbds	100	97.590	ENSORLG00015008005	sbds	100	97.590	Oryzias_latipes_hsok
ENSOMEG00000022747	sbds	100	70.281	ENSOGAG00000015036	-	99	70.281	Otolemur_garnettii
ENSOMEG00000022747	sbds	100	81.526	ENSOGAG00000009011	-	99	81.526	Otolemur_garnettii
ENSOMEG00000022747	sbds	100	81.124	ENSOARG00000010609	SBDS	99	81.124	Ovis_aries
ENSOMEG00000022747	sbds	100	79.920	ENSPPAG00000043889	-	99	79.920	Pan_paniscus
ENSOMEG00000022747	sbds	100	80.723	ENSPPRG00000002307	SBDS	99	80.723	Panthera_pardus
ENSOMEG00000022747	sbds	100	80.723	ENSPTIG00000021308	SBDS	99	80.723	Panthera_tigris_altaica
ENSOMEG00000022747	sbds	100	67.068	ENSPTRG00000050835	-	99	67.068	Pan_troglodytes
ENSOMEG00000022747	sbds	87	78.341	ENSPTRG00000048174	-	96	78.341	Pan_troglodytes
ENSOMEG00000022747	sbds	100	80.723	ENSPTRG00000019254	SBDS	99	80.723	Pan_troglodytes
ENSOMEG00000022747	sbds	100	67.068	ENSPTRG00000047744	-	99	67.068	Pan_troglodytes
ENSOMEG00000022747	sbds	100	80.723	ENSPANG00000004078	SBDS	99	80.723	Papio_anubis
ENSOMEG00000022747	sbds	100	87.550	ENSPKIG00000006489	sbds	99	87.550	Paramormyrops_kingsleyae
ENSOMEG00000022747	sbds	83	82.126	ENSPSIG00000014603	SBDS	99	82.126	Pelodiscus_sinensis
ENSOMEG00000022747	sbds	100	92.771	ENSPMGG00000004246	sbds	100	92.771	Periophthalmus_magnuspinnatus
ENSOMEG00000022747	sbds	100	81.928	ENSPEMG00000008728	Sbds	99	81.928	Peromyscus_maniculatus_bairdii
ENSOMEG00000022747	sbds	100	82.731	ENSPCIG00000029718	SBDS	99	82.731	Phascolarctos_cinereus
ENSOMEG00000022747	sbds	100	91.968	ENSPFOG00000015837	sbds	100	91.968	Poecilia_formosa
ENSOMEG00000022747	sbds	100	92.369	ENSPLAG00000003641	sbds	100	92.369	Poecilia_latipinna
ENSOMEG00000022747	sbds	100	91.968	ENSPMEG00000019483	sbds	100	91.968	Poecilia_mexicana
ENSOMEG00000022747	sbds	100	92.369	ENSPREG00000018758	sbds	100	92.369	Poecilia_reticulata
ENSOMEG00000022747	sbds	100	80.723	ENSPPYG00000017513	SBDS	99	80.723	Pongo_abelii
ENSOMEG00000022747	sbds	100	80.723	ENSPCOG00000021098	SBDS	99	80.723	Propithecus_coquereli
ENSOMEG00000022747	sbds	100	81.124	ENSPVAG00000009369	SBDS	99	81.124	Pteropus_vampyrus
ENSOMEG00000022747	sbds	100	93.574	ENSPNYG00000022403	sbds	100	93.574	Pundamilia_nyererei
ENSOMEG00000022747	sbds	100	87.952	ENSPNAG00000001120	sbds	99	87.952	Pygocentrus_nattereri
ENSOMEG00000022747	sbds	100	82.329	ENSRNOG00000000888	Sbds	99	82.329	Rattus_norvegicus
ENSOMEG00000022747	sbds	100	80.723	ENSRBIG00000035557	SBDS	99	80.723	Rhinopithecus_bieti
ENSOMEG00000022747	sbds	100	80.723	ENSRROG00000040842	-	99	80.723	Rhinopithecus_roxellana
ENSOMEG00000022747	sbds	100	66.667	ENSRROG00000041986	-	99	66.667	Rhinopithecus_roxellana
ENSOMEG00000022747	sbds	96	44.309	YLR022C	-	96	44.309	Saccharomyces_cerevisiae
ENSOMEG00000022747	sbds	93	78.788	ENSSBOG00000022460	SBDS	99	78.788	Saimiri_boliviensis_boliviensis
ENSOMEG00000022747	sbds	100	71.486	ENSSHAG00000010263	SBDS	99	71.486	Sarcophilus_harrisii
ENSOMEG00000022747	sbds	100	89.157	ENSSFOG00015001108	sbds	99	89.157	Scleropages_formosus
ENSOMEG00000022747	sbds	100	90.763	ENSSMAG00000020506	sbds	100	90.763	Scophthalmus_maximus
ENSOMEG00000022747	sbds	100	91.968	ENSSDUG00000001528	sbds	100	91.968	Seriola_dumerili
ENSOMEG00000022747	sbds	100	91.566	ENSSLDG00000003659	sbds	100	91.566	Seriola_lalandi_dorsalis
ENSOMEG00000022747	sbds	61	84.967	ENSSARG00000013132	-	100	84.967	Sorex_araneus
ENSOMEG00000022747	sbds	73	87.209	ENSSARG00000001899	-	73	87.209	Sorex_araneus
ENSOMEG00000022747	sbds	100	81.526	ENSSPUG00000002699	SBDS	99	81.526	Sphenodon_punctatus
ENSOMEG00000022747	sbds	100	93.574	ENSSPAG00000016419	sbds	100	86.000	Stegastes_partitus
ENSOMEG00000022747	sbds	100	81.124	ENSSSCG00000007732	SBDS	99	81.124	Sus_scrofa
ENSOMEG00000022747	sbds	66	84.756	ENSTGUG00000003426	SBDS	99	84.756	Taeniopygia_guttata
ENSOMEG00000022747	sbds	100	92.369	ENSTRUG00000021443	sbds	100	92.369	Takifugu_rubripes
ENSOMEG00000022747	sbds	100	91.566	ENSTNIG00000019000	sbds	100	91.566	Tetraodon_nigroviridis
ENSOMEG00000022747	sbds	84	70.192	ENSTBEG00000001178	SBDS	100	70.192	Tupaia_belangeri
ENSOMEG00000022747	sbds	100	63.855	ENSTTRG00000003921	SBDS	99	63.855	Tursiops_truncatus
ENSOMEG00000022747	sbds	100	80.723	ENSUAMG00000001326	SBDS	99	80.723	Ursus_americanus
ENSOMEG00000022747	sbds	100	80.723	ENSUMAG00000015353	SBDS	99	80.723	Ursus_maritimus
ENSOMEG00000022747	sbds	100	80.723	ENSVVUG00000016478	SBDS	99	80.723	Vulpes_vulpes
ENSOMEG00000022747	sbds	100	84.337	ENSXETG00000010093	sbds	99	84.337	Xenopus_tropicalis
ENSOMEG00000022747	sbds	100	81.124	ENSXCOG00000010639	sbds	100	81.124	Xiphophorus_couchianus
ENSOMEG00000022747	sbds	100	91.968	ENSXMAG00000006065	sbds	100	91.968	Xiphophorus_maculatus