EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000022840 (Gene tree)
Gene ID: 112137706
Gene Symbol: rabl6b
Alias: -
Full Name: RAB%2C member RAS oncogene family like 6
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 15984 bases
Position: chrNVQA01000037.1:3570444-3586427
Accession: 112137706
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000035502	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000036354	-	4427	-	ENSOMEP00000020946	749 (aa)	XP_024115908	UPI000CF833C9
ENSOMET00000030487	-	5549	-	ENSOMEP00000035502	682 (aa)	-	-
ENSOMET00000030471	-	1350	-	ENSOMEP00000020909	449 (aa)	-	-
ENSOMET00000036347	-	5573	-	ENSOMEP00000020933	690 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000022840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022840	rabl6b	96	74.661	ENSACIG00000010721	rabl6b	92	71.306	Amphilophus_citrinellus
ENSOMEG00000022840	rabl6b	96	81.212	ENSATEG00000012055	rabl6b	89	81.212	Anabas_testudineus
ENSOMEG00000022840	rabl6b	97	59.942	ENSAMXG00000038771	rabl6b	90	60.417	Astyanax_mexicanus
ENSOMEG00000022840	rabl6b	95	73.835	ENSCSEG00000012430	-	95	73.958	Cynoglossus_semilaevis
ENSOMEG00000022840	rabl6b	95	75.150	ENSCSEG00000016135	rabl6b	89	74.184	Cynoglossus_semilaevis
ENSOMEG00000022840	rabl6b	96	65.517	ENSELUG00000004448	rabl6b	90	72.727	Esox_lucius
ENSOMEG00000022840	rabl6b	97	76.807	ENSGAFG00000013561	rabl6b	100	75.420	Gambusia_affinis
ENSOMEG00000022840	rabl6b	96	79.305	ENSGACG00000005242	rabl6b	89	78.788	Gasterosteus_aculeatus
ENSOMEG00000022840	rabl6b	96	80.873	ENSHBUG00000014235	rabl6b	89	81.627	Haplochromis_burtoni
ENSOMEG00000022840	rabl6b	96	65.698	ENSIPUG00000019266	rabl6	89	62.767	Ictalurus_punctatus
ENSOMEG00000022840	rabl6b	91	56.146	ENSLOCG00000001402	rabl6b	77	86.122	Lepisosteus_oculatus
ENSOMEG00000022840	rabl6b	96	76.818	ENSMAMG00000019516	rabl6b	89	76.667	Mastacembelus_armatus
ENSOMEG00000022840	rabl6b	68	71.822	ENSMZEG00005003942	rabl6b	99	71.610	Maylandia_zebra
ENSOMEG00000022840	rabl6b	69	70.513	ENSMMOG00000009459	rabl6b	97	67.377	Mola_mola
ENSOMEG00000022840	rabl6b	97	79.674	ENSMALG00000002029	rabl6b	89	79.970	Monopterus_albus
ENSOMEG00000022840	rabl6b	68	72.399	ENSNBRG00000012512	rabl6b	99	71.125	Neolamprologus_brichardi
ENSOMEG00000022840	rabl6b	96	79.305	ENSONIG00000010408	rabl6b	89	81.032	Oreochromis_niloticus
ENSOMEG00000022840	rabl6b	96	90.991	ENSORLG00020017557	rabl6b	89	91.416	Oryzias_latipes_hni
ENSOMEG00000022840	rabl6b	99	90.698	ENSORLG00015007848	rabl6b	92	91.855	Oryzias_latipes_hsok
ENSOMEG00000022840	rabl6b	96	65.817	ENSPKIG00000007459	RABL6	86	65.460	Paramormyrops_kingsleyae
ENSOMEG00000022840	rabl6b	97	58.475	ENSPCIG00000023722	RABL6	95	57.745	Phascolarctos_cinereus
ENSOMEG00000022840	rabl6b	96	81.024	ENSPFOG00000003250	rabl6b	89	81.325	Poecilia_formosa
ENSOMEG00000022840	rabl6b	96	80.873	ENSPLAG00000019562	rabl6b	89	81.175	Poecilia_latipinna
ENSOMEG00000022840	rabl6b	96	81.024	ENSPMEG00000020472	rabl6b	89	81.325	Poecilia_mexicana
ENSOMEG00000022840	rabl6b	97	80.386	ENSPREG00000014116	rabl6b	94	81.175	Poecilia_reticulata
ENSOMEG00000022840	rabl6b	95	64.947	ENSSFOG00015013414	-	88	65.000	Scleropages_formosus
ENSOMEG00000022840	rabl6b	96	67.015	ENSSFOG00015017388	RABL6	90	67.365	Scleropages_formosus
ENSOMEG00000022840	rabl6b	95	80.000	ENSSMAG00000012543	rabl6b	95	79.970	Scophthalmus_maximus
ENSOMEG00000022840	rabl6b	95	81.818	ENSSDUG00000006564	rabl6b	89	81.777	Seriola_dumerili
ENSOMEG00000022840	rabl6b	96	83.383	ENSSPAG00000021033	rabl6b	95	83.584	Stegastes_partitus
ENSOMEG00000022840	rabl6b	99	73.639	ENSTNIG00000010595	rabl6b	94	74.815	Tetraodon_nigroviridis