EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000022866 (Gene tree)
Gene ID: -
Gene Symbol: rps27a
Alias: -
Full Name: ribosomal protein S27a
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 3471 bases
Position: chrNVQA01000028.1:8411128-8414598
Accession: ZDB-GENE-030131-10018
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000035532	Ribosomal_S27	PF01599.19	3.4e-27	1	1
ENSOMEP00000020966	Ribosomal_S27	PF01599.19	4.6e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000030543	-	912	-	ENSOMEP00000020966	183 (aa)	-	-
ENSOMET00000030532	-	951	-	ENSOMEP00000035532	156 (aa)	-	UPI0000EA110A

Gene Model

Click here to download ENSOMEG00000022866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022866	rps27a	100	99.359	ENSAPOG00000022780	rps27a	100	99.359	Acanthochromis_polyacanthus
ENSOMEG00000022866	rps27a	100	99.359	ENSAOCG00000000282	rps27a	100	99.359	Amphiprion_ocellaris
ENSOMEG00000022866	rps27a	100	99.359	ENSAPEG00000010300	rps27a	100	99.359	Amphiprion_percula
ENSOMEG00000022866	rps27a	100	98.718	ENSATEG00000021507	rps27a	100	98.718	Anabas_testudineus
ENSOMEG00000022866	rps27a	100	99.359	ENSAMXG00000040689	rps27a	100	99.359	Astyanax_mexicanus
ENSOMEG00000022866	rps27a	76	99.153	ENSCJAG00000046243	-	100	99.153	Callithrix_jacchus
ENSOMEG00000022866	rps27a	100	97.436	ENSTSYG00000000845	-	100	97.436	Carlito_syrichta
ENSOMEG00000022866	rps27a	100	89.103	ENSCING00000005834	r27a	100	89.103	Ciona_intestinalis
ENSOMEG00000022866	rps27a	99	81.169	ENSCSAVG00000001323	-	95	81.169	Ciona_savignyi
ENSOMEG00000022866	rps27a	100	76.282	ENSCGRG00001008358	-	100	75.641	Cricetulus_griseus_chok1gshd
ENSOMEG00000022866	rps27a	100	99.359	ENSCSEG00000001603	rps27a	100	99.359	Cynoglossus_semilaevis
ENSOMEG00000022866	rps27a	100	99.359	ENSCVAG00000004811	rps27a	86	99.359	Cyprinodon_variegatus
ENSOMEG00000022866	rps27a	100	99.359	ENSDARG00000032725	rps27a	100	99.359	Danio_rerio
ENSOMEG00000022866	rps27a	100	91.667	FBgn0003942	RpS27A	100	91.667	Drosophila_melanogaster
ENSOMEG00000022866	rps27a	100	93.590	ENSEBUG00000007396	rps27a	100	93.590	Eptatretus_burgeri
ENSOMEG00000022866	rps27a	100	99.359	ENSELUG00000004527	rps27a	100	99.359	Esox_lucius
ENSOMEG00000022866	rps27a	100	99.359	ENSFHEG00000001180	rps27a	100	99.359	Fundulus_heteroclitus
ENSOMEG00000022866	rps27a	100	99.359	ENSGMOG00000011896	rps27a	91	99.359	Gadus_morhua
ENSOMEG00000022866	rps27a	100	99.359	ENSGAFG00000014202	rps27a	100	99.359	Gambusia_affinis
ENSOMEG00000022866	rps27a	100	99.359	ENSGACG00000011558	rps27a	100	99.359	Gasterosteus_aculeatus
ENSOMEG00000022866	rps27a	100	99.359	ENSHBUG00000003375	rps27a	100	99.359	Haplochromis_burtoni
ENSOMEG00000022866	rps27a	100	99.359	ENSHCOG00000019712	rps27a	100	99.359	Hippocampus_comes
ENSOMEG00000022866	rps27a	100	99.359	ENSIPUG00000015317	rps27a	100	99.359	Ictalurus_punctatus
ENSOMEG00000022866	rps27a	100	99.359	ENSKMAG00000003156	rps27a	100	99.359	Kryptolebias_marmoratus
ENSOMEG00000022866	rps27a	100	99.359	ENSLBEG00000000541	rps27a	100	99.359	Labrus_bergylta
ENSOMEG00000022866	rps27a	100	97.436	ENSLACG00000007672	rps27a	100	97.436	Latimeria_chalumnae
ENSOMEG00000022866	rps27a	100	99.359	ENSLOCG00000015551	rps27a	96	99.359	Lepisosteus_oculatus
ENSOMEG00000022866	rps27a	100	96.795	ENSMNEG00000026442	-	100	96.795	Macaca_nemestrina
ENSOMEG00000022866	rps27a	88	98.551	ENSMLEG00000003375	-	100	98.551	Mandrillus_leucophaeus
ENSOMEG00000022866	rps27a	100	99.359	ENSMAMG00000022556	rps27a	100	99.359	Mastacembelus_armatus
ENSOMEG00000022866	rps27a	100	99.359	ENSMZEG00005004484	rps27a	100	99.359	Maylandia_zebra
ENSOMEG00000022866	rps27a	100	98.718	ENSMMOG00000007733	rps27a	100	98.718	Mola_mola
ENSOMEG00000022866	rps27a	100	99.359	ENSMALG00000014759	rps27a	100	99.359	Monopterus_albus
ENSOMEG00000022866	rps27a	100	99.359	ENSNBRG00000010708	rps27a	100	99.359	Neolamprologus_brichardi
ENSOMEG00000022866	rps27a	100	99.359	ENSONIG00000016075	rps27a	96	99.359	Oreochromis_niloticus
ENSOMEG00000022866	rps27a	100	100.000	ENSORLG00000029546	rps27a	100	100.000	Oryzias_latipes
ENSOMEG00000022866	rps27a	100	86.667	ENSORLG00020017665	-	100	86.667	Oryzias_latipes_hni
ENSOMEG00000022866	rps27a	100	100.000	ENSORLG00015003772	rps27a	100	100.000	Oryzias_latipes_hsok
ENSOMEG00000022866	rps27a	92	88.889	ENSOGAG00000029795	-	92	88.194	Otolemur_garnettii
ENSOMEG00000022866	rps27a	100	94.872	ENSOARG00000014935	-	91	93.590	Ovis_aries
ENSOMEG00000022866	rps27a	100	96.154	ENSPPAG00000023609	-	100	96.154	Pan_paniscus
ENSOMEG00000022866	rps27a	100	97.436	ENSPTRG00000023227	-	100	97.436	Pan_troglodytes
ENSOMEG00000022866	rps27a	100	98.718	ENSPKIG00000021492	rps27a	100	98.718	Paramormyrops_kingsleyae
ENSOMEG00000022866	rps27a	78	91.803	ENSPMAG00000006335	-	100	91.803	Petromyzon_marinus
ENSOMEG00000022866	rps27a	100	99.359	ENSPFOG00000013152	rps27a	100	99.359	Poecilia_formosa
ENSOMEG00000022866	rps27a	100	99.359	ENSPLAG00000012639	rps27a	100	99.359	Poecilia_latipinna
ENSOMEG00000022866	rps27a	100	99.359	ENSPMEG00000015419	rps27a	100	99.359	Poecilia_mexicana
ENSOMEG00000022866	rps27a	100	99.359	ENSPREG00000012478	rps27a	100	99.359	Poecilia_reticulata
ENSOMEG00000022866	rps27a	97	96.026	ENSPVAG00000016471	-	100	96.026	Pteropus_vampyrus
ENSOMEG00000022866	rps27a	100	99.359	ENSPNYG00000019989	rps27a	100	99.359	Pundamilia_nyererei
ENSOMEG00000022866	rps27a	100	99.359	ENSPNAG00000002903	rps27a	100	99.359	Pygocentrus_nattereri
ENSOMEG00000022866	rps27a	97	82.781	YLR167W	RPS31	99	82.781	Saccharomyces_cerevisiae
ENSOMEG00000022866	rps27a	99	98.710	ENSSFOG00015017733	rps27a	88	98.710	Scleropages_formosus
ENSOMEG00000022866	rps27a	100	99.359	ENSSMAG00000004941	rps27a	100	99.359	Scophthalmus_maximus
ENSOMEG00000022866	rps27a	100	99.359	ENSSDUG00000003170	rps27a	100	99.359	Seriola_dumerili
ENSOMEG00000022866	rps27a	99	83.766	ENSSLDG00000001310	-	99	83.766	Seriola_lalandi_dorsalis
ENSOMEG00000022866	rps27a	100	99.359	ENSSPAG00000022744	rps27a	100	99.359	Stegastes_partitus
ENSOMEG00000022866	rps27a	100	99.359	ENSTRUG00000010963	rps27a	100	99.359	Takifugu_rubripes
ENSOMEG00000022866	rps27a	90	97.857	ENSTNIG00000018689	rps27a	100	97.857	Tetraodon_nigroviridis
ENSOMEG00000022866	rps27a	100	99.359	ENSXCOG00000003780	rps27a	100	99.359	Xiphophorus_couchianus
ENSOMEG00000022866	rps27a	100	99.359	ENSXMAG00000000171	rps27a	100	99.359	Xiphophorus_maculatus