EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000022876 (Gene tree)
Gene ID: 112157676
Gene Symbol: cpsf2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 8978 bases
Position: chrNVQA01000023.1:19733865-19742842
Accession: 112157676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000020984	Beta-Casp	PF10996.8	1.8e-21	1	1
ENSOMEP00000020984	Lactamase_B	PF00753.27	4e-05	1	1
ENSOMEP00000020984	RMMBL	PF07521.12	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000030562	-	2614	XM_024290547	ENSOMEP00000020984	788 (aa)	XP_024146315	UPI000CF7F9F7

Gene Model

Click here to download ENSOMEG00000022876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022876	cpsf2	100	84.284	ENSG00000165934	CPSF2	100	87.500	Homo_sapiens
ENSOMEG00000022876	cpsf2	100	94.162	ENSAPOG00000001242	cpsf2	100	94.162	Acanthochromis_polyacanthus
ENSOMEG00000022876	cpsf2	100	93.916	ENSACIG00000009331	cpsf2	100	93.790	Amphilophus_citrinellus
ENSOMEG00000022876	cpsf2	100	94.289	ENSAOCG00000014095	cpsf2	100	94.289	Amphiprion_ocellaris
ENSOMEG00000022876	cpsf2	100	94.289	ENSAPEG00000009158	cpsf2	100	94.289	Amphiprion_percula
ENSOMEG00000022876	cpsf2	96	93.149	ENSATEG00000017644	cpsf2	99	91.625	Anabas_testudineus
ENSOMEG00000022876	cpsf2	100	83.712	ENSAPLG00000006330	CPSF2	100	83.712	Anas_platyrhynchos
ENSOMEG00000022876	cpsf2	100	84.030	ENSACAG00000009245	CPSF2	100	84.030	Anolis_carolinensis
ENSOMEG00000022876	cpsf2	100	84.284	ENSANAG00000022915	CPSF2	100	84.284	Aotus_nancymaae
ENSOMEG00000022876	cpsf2	100	88.973	ENSAMXG00000018696	cpsf2	100	88.973	Astyanax_mexicanus
ENSOMEG00000022876	cpsf2	100	84.157	ENSBTAG00000010227	CPSF2	100	84.157	Bos_taurus
ENSOMEG00000022876	cpsf2	100	42.272	WBGene00017313	cpsf-2	100	41.803	Caenorhabditis_elegans
ENSOMEG00000022876	cpsf2	100	84.284	ENSCJAG00000018069	CPSF2	100	84.284	Callithrix_jacchus
ENSOMEG00000022876	cpsf2	100	84.030	ENSCAFG00000010909	CPSF2	100	84.030	Canis_familiaris
ENSOMEG00000022876	cpsf2	100	84.030	ENSCAFG00020020670	CPSF2	100	84.030	Canis_lupus_dingo
ENSOMEG00000022876	cpsf2	100	84.157	ENSCHIG00000023848	CPSF2	100	84.157	Capra_hircus
ENSOMEG00000022876	cpsf2	100	84.411	ENSTSYG00000009036	CPSF2	100	84.411	Carlito_syrichta
ENSOMEG00000022876	cpsf2	100	84.157	ENSCPOG00000010899	CPSF2	100	84.157	Cavia_porcellus
ENSOMEG00000022876	cpsf2	100	84.284	ENSCCAG00000028088	CPSF2	100	84.284	Cebus_capucinus
ENSOMEG00000022876	cpsf2	100	84.157	ENSCATG00000030132	CPSF2	100	84.157	Cercocebus_atys
ENSOMEG00000022876	cpsf2	100	84.284	ENSCLAG00000012404	CPSF2	100	84.284	Chinchilla_lanigera
ENSOMEG00000022876	cpsf2	100	84.157	ENSCSAG00000011300	CPSF2	100	84.157	Chlorocebus_sabaeus
ENSOMEG00000022876	cpsf2	100	79.087	ENSCHOG00000012904	CPSF2	100	79.087	Choloepus_hoffmanni
ENSOMEG00000022876	cpsf2	100	84.411	ENSCPBG00000008766	CPSF2	97	84.284	Chrysemys_picta_bellii
ENSOMEG00000022876	cpsf2	100	53.846	ENSCING00000007881	-	100	53.779	Ciona_intestinalis
ENSOMEG00000022876	cpsf2	94	84.054	ENSCANG00000041651	CPSF2	100	84.032	Colobus_angolensis_palliatus
ENSOMEG00000022876	cpsf2	100	83.650	ENSCGRG00001006901	Cpsf2	100	83.650	Cricetulus_griseus_chok1gshd
ENSOMEG00000022876	cpsf2	100	83.650	ENSCGRG00000012416	Cpsf2	100	83.650	Cricetulus_griseus_crigri
ENSOMEG00000022876	cpsf2	100	92.893	ENSCSEG00000004116	cpsf2	100	92.893	Cynoglossus_semilaevis
ENSOMEG00000022876	cpsf2	100	94.162	ENSCVAG00000000095	cpsf2	100	94.416	Cyprinodon_variegatus
ENSOMEG00000022876	cpsf2	100	87.215	ENSDARG00000028971	cpsf2	100	87.215	Danio_rerio
ENSOMEG00000022876	cpsf2	100	84.157	ENSDNOG00000042757	CPSF2	100	84.157	Dasypus_novemcinctus
ENSOMEG00000022876	cpsf2	100	84.157	ENSDORG00000013709	Cpsf2	100	84.157	Dipodomys_ordii
ENSOMEG00000022876	cpsf2	100	53.094	FBgn0027873	Cpsf100	100	53.342	Drosophila_melanogaster
ENSOMEG00000022876	cpsf2	100	76.835	ENSETEG00000012123	CPSF2	100	76.835	Echinops_telfairi
ENSOMEG00000022876	cpsf2	52	77.017	ENSEBUG00000012098	cpsf2	93	77.017	Eptatretus_burgeri
ENSOMEG00000022876	cpsf2	89	89.761	ENSEASG00005021193	CPSF2	100	89.761	Equus_asinus_asinus
ENSOMEG00000022876	cpsf2	100	84.030	ENSECAG00000023935	CPSF2	100	84.030	Equus_caballus
ENSOMEG00000022876	cpsf2	100	88.191	ENSELUG00000008442	cpsf2	100	88.191	Esox_lucius
ENSOMEG00000022876	cpsf2	100	84.030	ENSFCAG00000007886	CPSF2	100	84.030	Felis_catus
ENSOMEG00000022876	cpsf2	100	84.030	ENSFALG00000002412	CPSF2	100	83.712	Ficedula_albicollis
ENSOMEG00000022876	cpsf2	100	84.030	ENSFDAG00000006327	CPSF2	100	84.030	Fukomys_damarensis
ENSOMEG00000022876	cpsf2	96	92.932	ENSFHEG00000015465	cpsf2	98	93.717	Fundulus_heteroclitus
ENSOMEG00000022876	cpsf2	100	88.748	ENSGMOG00000008761	cpsf2	100	88.748	Gadus_morhua
ENSOMEG00000022876	cpsf2	100	84.557	ENSGALG00000010783	CPSF2	100	84.557	Gallus_gallus
ENSOMEG00000022876	cpsf2	100	94.670	ENSGAFG00000001407	cpsf2	100	94.670	Gambusia_affinis
ENSOMEG00000022876	cpsf2	100	94.036	ENSGACG00000008418	cpsf2	100	94.036	Gasterosteus_aculeatus
ENSOMEG00000022876	cpsf2	100	84.284	ENSGAGG00000008287	CPSF2	100	84.157	Gopherus_agassizii
ENSOMEG00000022876	cpsf2	100	84.284	ENSGGOG00000011799	CPSF2	100	84.284	Gorilla_gorilla
ENSOMEG00000022876	cpsf2	100	92.386	ENSHBUG00000023466	cpsf2	100	92.259	Haplochromis_burtoni
ENSOMEG00000022876	cpsf2	100	84.157	ENSHGLG00000018311	CPSF2	100	84.157	Heterocephalus_glaber_female
ENSOMEG00000022876	cpsf2	100	84.157	ENSHGLG00100016460	CPSF2	100	84.157	Heterocephalus_glaber_male
ENSOMEG00000022876	cpsf2	100	92.893	ENSHCOG00000019527	cpsf2	98	92.893	Hippocampus_comes
ENSOMEG00000022876	cpsf2	100	89.734	ENSIPUG00000020857	cpsf2	100	89.734	Ictalurus_punctatus
ENSOMEG00000022876	cpsf2	100	84.284	ENSSTOG00000009528	CPSF2	100	84.284	Ictidomys_tridecemlineatus
ENSOMEG00000022876	cpsf2	100	84.030	ENSJJAG00000017925	Cpsf2	100	84.030	Jaculus_jaculus
ENSOMEG00000022876	cpsf2	100	93.528	ENSKMAG00000019429	cpsf2	100	93.528	Kryptolebias_marmoratus
ENSOMEG00000022876	cpsf2	95	92.771	ENSLBEG00000011585	cpsf2	100	92.905	Labrus_bergylta
ENSOMEG00000022876	cpsf2	100	82.890	ENSLACG00000019024	CPSF2	100	83.165	Latimeria_chalumnae
ENSOMEG00000022876	cpsf2	100	88.101	ENSLOCG00000014102	cpsf2	100	88.101	Lepisosteus_oculatus
ENSOMEG00000022876	cpsf2	100	83.818	ENSLAFG00000004891	CPSF2	100	83.818	Loxodonta_africana
ENSOMEG00000022876	cpsf2	100	84.157	ENSMFAG00000041212	CPSF2	100	84.157	Macaca_fascicularis
ENSOMEG00000022876	cpsf2	100	84.157	ENSMMUG00000000699	CPSF2	100	84.157	Macaca_mulatta
ENSOMEG00000022876	cpsf2	100	84.157	ENSMNEG00000031584	CPSF2	100	84.157	Macaca_nemestrina
ENSOMEG00000022876	cpsf2	100	84.157	ENSMLEG00000029394	CPSF2	100	84.157	Mandrillus_leucophaeus
ENSOMEG00000022876	cpsf2	100	94.162	ENSMAMG00000004235	cpsf2	100	94.162	Mastacembelus_armatus
ENSOMEG00000022876	cpsf2	100	92.513	ENSMZEG00005001769	cpsf2	100	92.386	Maylandia_zebra
ENSOMEG00000022876	cpsf2	100	84.324	ENSMGAG00000013122	CPSF2	100	84.324	Meleagris_gallopavo
ENSOMEG00000022876	cpsf2	100	83.777	ENSMAUG00000015160	Cpsf2	100	83.777	Mesocricetus_auratus
ENSOMEG00000022876	cpsf2	100	84.157	ENSMICG00000016441	CPSF2	100	84.157	Microcebus_murinus
ENSOMEG00000022876	cpsf2	100	83.650	ENSMOCG00000015372	Cpsf2	100	83.650	Microtus_ochrogaster
ENSOMEG00000022876	cpsf2	100	88.325	ENSMMOG00000015590	cpsf2	100	88.325	Mola_mola
ENSOMEG00000022876	cpsf2	100	84.284	ENSMODG00000002042	CPSF2	100	84.284	Monodelphis_domestica
ENSOMEG00000022876	cpsf2	100	90.482	ENSMALG00000022275	cpsf2	100	90.482	Monopterus_albus
ENSOMEG00000022876	cpsf2	100	83.904	ENSMUSG00000041781	Cpsf2	100	83.904	Mus_musculus
ENSOMEG00000022876	cpsf2	100	83.777	MGP_PahariEiJ_G0029791	Cpsf2	100	83.777	Mus_pahari
ENSOMEG00000022876	cpsf2	100	83.904	MGP_SPRETEiJ_G0018877	Cpsf2	100	83.904	Mus_spretus
ENSOMEG00000022876	cpsf2	100	84.157	ENSMPUG00000007617	CPSF2	98	84.157	Mustela_putorius_furo
ENSOMEG00000022876	cpsf2	100	83.904	ENSMLUG00000005570	CPSF2	100	83.650	Myotis_lucifugus
ENSOMEG00000022876	cpsf2	100	83.904	ENSNGAG00000020312	Cpsf2	100	83.904	Nannospalax_galili
ENSOMEG00000022876	cpsf2	100	92.893	ENSNBRG00000022402	cpsf2	100	92.766	Neolamprologus_brichardi
ENSOMEG00000022876	cpsf2	100	83.777	ENSNLEG00000017132	CPSF2	100	83.777	Nomascus_leucogenys
ENSOMEG00000022876	cpsf2	91	92.557	ENSMEUG00000008138	CPSF2	91	92.557	Notamacropus_eugenii
ENSOMEG00000022876	cpsf2	94	79.702	ENSOPRG00000008484	-	92	87.333	Ochotona_princeps
ENSOMEG00000022876	cpsf2	100	83.904	ENSODEG00000008682	CPSF2	100	83.904	Octodon_degus
ENSOMEG00000022876	cpsf2	100	92.893	ENSONIG00000005901	cpsf2	100	92.766	Oreochromis_niloticus
ENSOMEG00000022876	cpsf2	100	84.411	ENSOANG00000003822	CPSF2	100	84.411	Ornithorhynchus_anatinus
ENSOMEG00000022876	cpsf2	100	84.030	ENSOCUG00000005713	CPSF2	100	84.030	Oryctolagus_cuniculus
ENSOMEG00000022876	cpsf2	100	92.132	ENSORLG00000011628	cpsf2	100	92.132	Oryzias_latipes
ENSOMEG00000022876	cpsf2	100	97.970	ENSORLG00020016980	cpsf2	100	97.970	Oryzias_latipes_hni
ENSOMEG00000022876	cpsf2	100	97.970	ENSORLG00015011910	cpsf2	100	97.970	Oryzias_latipes_hsok
ENSOMEG00000022876	cpsf2	100	81.163	ENSOARG00000012889	CPSF2	100	81.163	Ovis_aries
ENSOMEG00000022876	cpsf2	100	84.284	ENSPPAG00000039666	CPSF2	100	84.284	Pan_paniscus
ENSOMEG00000022876	cpsf2	99	84.010	ENSPPRG00000010869	CPSF2	100	84.010	Panthera_pardus
ENSOMEG00000022876	cpsf2	100	84.030	ENSPTIG00000021202	CPSF2	100	84.030	Panthera_tigris_altaica
ENSOMEG00000022876	cpsf2	100	84.284	ENSPTRG00000006651	CPSF2	100	84.284	Pan_troglodytes
ENSOMEG00000022876	cpsf2	100	84.157	ENSPANG00000017417	CPSF2	100	84.157	Papio_anubis
ENSOMEG00000022876	cpsf2	100	83.777	ENSPKIG00000021453	cpsf2	100	83.777	Paramormyrops_kingsleyae
ENSOMEG00000022876	cpsf2	100	83.904	ENSPSIG00000006289	CPSF2	100	83.777	Pelodiscus_sinensis
ENSOMEG00000022876	cpsf2	76	87.167	ENSPMGG00000002511	cpsf2	99	87.167	Periophthalmus_magnuspinnatus
ENSOMEG00000022876	cpsf2	100	84.030	ENSPEMG00000007917	Cpsf2	100	84.030	Peromyscus_maniculatus_bairdii
ENSOMEG00000022876	cpsf2	100	72.556	ENSPMAG00000006205	cpsf2	100	73.159	Petromyzon_marinus
ENSOMEG00000022876	cpsf2	100	84.284	ENSPCIG00000011393	CPSF2	100	84.284	Phascolarctos_cinereus
ENSOMEG00000022876	cpsf2	100	94.797	ENSPFOG00000018648	cpsf2	100	94.797	Poecilia_formosa
ENSOMEG00000022876	cpsf2	100	94.797	ENSPLAG00000019199	cpsf2	99	94.797	Poecilia_latipinna
ENSOMEG00000022876	cpsf2	96	94.730	ENSPMEG00000012100	cpsf2	100	94.511	Poecilia_mexicana
ENSOMEG00000022876	cpsf2	100	94.543	ENSPREG00000008960	cpsf2	100	94.543	Poecilia_reticulata
ENSOMEG00000022876	cpsf2	64	79.920	ENSPPYG00000029685	-	100	79.920	Pongo_abelii
ENSOMEG00000022876	cpsf2	100	84.030	ENSPCAG00000012477	CPSF2	100	84.030	Procavia_capensis
ENSOMEG00000022876	cpsf2	100	84.157	ENSPCOG00000026387	CPSF2	100	84.157	Propithecus_coquereli
ENSOMEG00000022876	cpsf2	64	90.306	ENSPVAG00000004223	CPSF2	65	90.306	Pteropus_vampyrus
ENSOMEG00000022876	cpsf2	100	92.269	ENSPNYG00000023356	cpsf2	100	92.142	Pundamilia_nyererei
ENSOMEG00000022876	cpsf2	100	89.734	ENSPNAG00000001849	cpsf2	100	89.734	Pygocentrus_nattereri
ENSOMEG00000022876	cpsf2	100	83.904	ENSRNOG00000005733	Cpsf2	100	83.904	Rattus_norvegicus
ENSOMEG00000022876	cpsf2	100	84.157	ENSRBIG00000044792	CPSF2	100	84.157	Rhinopithecus_bieti
ENSOMEG00000022876	cpsf2	100	84.157	ENSRROG00000034875	CPSF2	100	84.157	Rhinopithecus_roxellana
ENSOMEG00000022876	cpsf2	100	84.284	ENSSBOG00000024571	CPSF2	100	84.284	Saimiri_boliviensis_boliviensis
ENSOMEG00000022876	cpsf2	100	84.411	ENSSHAG00000010458	CPSF2	100	84.411	Sarcophilus_harrisii
ENSOMEG00000022876	cpsf2	100	89.480	ENSSFOG00015002117	cpsf2	100	89.480	Scleropages_formosus
ENSOMEG00000022876	cpsf2	100	93.274	ENSSMAG00000002001	cpsf2	100	93.274	Scophthalmus_maximus
ENSOMEG00000022876	cpsf2	100	94.289	ENSSDUG00000004084	cpsf2	100	94.289	Seriola_dumerili
ENSOMEG00000022876	cpsf2	100	94.162	ENSSLDG00000024330	cpsf2	100	94.162	Seriola_lalandi_dorsalis
ENSOMEG00000022876	cpsf2	58	92.079	ENSSARG00000009784	-	63	92.079	Sorex_araneus
ENSOMEG00000022876	cpsf2	100	84.157	ENSSPUG00000013485	CPSF2	100	84.030	Sphenodon_punctatus
ENSOMEG00000022876	cpsf2	100	94.543	ENSSPAG00000013284	cpsf2	100	94.543	Stegastes_partitus
ENSOMEG00000022876	cpsf2	100	84.030	ENSSSCG00000002447	CPSF2	100	84.030	Sus_scrofa
ENSOMEG00000022876	cpsf2	100	84.157	ENSTGUG00000012571	-	100	83.838	Taeniopygia_guttata
ENSOMEG00000022876	cpsf2	100	92.893	ENSTRUG00000003742	cpsf2	100	92.893	Takifugu_rubripes
ENSOMEG00000022876	cpsf2	100	91.772	ENSTNIG00000012228	cpsf2	100	92.785	Tetraodon_nigroviridis
ENSOMEG00000022876	cpsf2	91	82.319	ENSTBEG00000004530	CPSF2	94	81.583	Tupaia_belangeri
ENSOMEG00000022876	cpsf2	88	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSOMEG00000022876	cpsf2	100	84.157	ENSUAMG00000028071	CPSF2	100	84.157	Ursus_americanus
ENSOMEG00000022876	cpsf2	100	84.157	ENSUMAG00000005029	CPSF2	100	84.157	Ursus_maritimus
ENSOMEG00000022876	cpsf2	99	84.010	ENSVPAG00000003503	CPSF2	100	84.010	Vicugna_pacos
ENSOMEG00000022876	cpsf2	100	84.030	ENSVVUG00000024642	CPSF2	100	84.030	Vulpes_vulpes
ENSOMEG00000022876	cpsf2	100	83.397	ENSXETG00000010289	cpsf2	100	83.397	Xenopus_tropicalis
ENSOMEG00000022876	cpsf2	100	94.416	ENSXCOG00000001764	cpsf2	100	94.416	Xiphophorus_couchianus
ENSOMEG00000022876	cpsf2	100	94.924	ENSXMAG00000017048	cpsf2	100	94.924	Xiphophorus_maculatus