EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000022971 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 1355 bases
Position: chrNVQA01000008.1:1198994-1200348
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000021081	zf-C2H2	PF00096.26	2.6e-14	1	2
ENSOMEP00000021081	zf-C2H2	PF00096.26	2.6e-14	2	2
ENSOMEP00000021081	zf-met	PF12874.7	7.7e-08	1	2
ENSOMEP00000021081	zf-met	PF12874.7	7.7e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000036426	-	363	-	ENSOMEP00000021081	120 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000022971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000022971	-	63	51.316	ENSOMEG00000005578	-	57	51.316
ENSOMEG00000022971	-	62	68.493	ENSOMEG00000023777	-	92	68.493
ENSOMEG00000022971	-	100	54.795	ENSOMEG00000015591	-	69	54.795
ENSOMEG00000022971	-	88	55.405	ENSOMEG00000010638	-	78	55.405
ENSOMEG00000022971	-	62	57.812	ENSOMEG00000000236	-	72	57.812
ENSOMEG00000022971	-	89	58.108	ENSOMEG00000013677	-	79	58.108
ENSOMEG00000022971	-	92	55.714	ENSOMEG00000009440	-	95	54.795
ENSOMEG00000022971	-	82	67.123	ENSOMEG00000023820	-	87	67.123
ENSOMEG00000022971	-	81	64.516	ENSOMEG00000023102	-	85	64.516
ENSOMEG00000022971	-	98	56.757	ENSOMEG00000010371	-	94	52.778
ENSOMEG00000022971	-	89	58.209	ENSOMEG00000002639	-	94	58.209
ENSOMEG00000022971	-	100	54.054	ENSOMEG00000014676	-	92	59.459
ENSOMEG00000022971	-	68	64.865	ENSOMEG00000022975	-	55	64.865
ENSOMEG00000022971	-	93	67.391	ENSOMEG00000023652	-	96	67.568
ENSOMEG00000022971	-	88	48.387	ENSOMEG00000016026	-	66	56.000
ENSOMEG00000022971	-	92	54.054	ENSOMEG00000000829	-	75	54.054
ENSOMEG00000022971	-	99	50.746	ENSOMEG00000013449	-	94	50.746
ENSOMEG00000022971	-	88	56.757	ENSOMEG00000019379	-	65	56.098
ENSOMEG00000022971	-	77	60.811	ENSOMEG00000001622	-	89	60.811
ENSOMEG00000022971	-	63	51.351	ENSOMEG00000019346	-	99	51.351
ENSOMEG00000022971	-	100	63.768	ENSOMEG00000009071	-	80	63.768
ENSOMEG00000022971	-	88	49.505	ENSOMEG00000016808	-	79	49.505
ENSOMEG00000022971	-	88	58.824	ENSOMEG00000010398	-	86	56.522
ENSOMEG00000022971	-	92	56.757	ENSOMEG00000019519	-	78	56.061
ENSOMEG00000022971	-	88	54.054	ENSOMEG00000012539	-	90	54.054
ENSOMEG00000022971	-	98	81.081	ENSOMEG00000022915	-	84	81.081
ENSOMEG00000022971	-	100	58.108	ENSOMEG00000018262	-	91	58.108
ENSOMEG00000022971	-	100	59.091	ENSOMEG00000021676	-	83	58.904
ENSOMEG00000022971	-	68	56.164	ENSOMEG00000019149	-	53	56.164
ENSOMEG00000022971	-	81	61.644	ENSOMEG00000021506	-	70	61.644
ENSOMEG00000022971	-	88	54.054	ENSOMEG00000019227	-	86	54.054
ENSOMEG00000022971	-	100	58.108	ENSOMEG00000021945	-	84	49.206
ENSOMEG00000022971	-	97	57.534	ENSOMEG00000015103	-	82	57.534
ENSOMEG00000022971	-	68	62.162	ENSOMEG00000018871	-	60	62.162
ENSOMEG00000022971	-	81	65.714	ENSOMEG00000023744	-	96	64.384
ENSOMEG00000022971	-	83	48.837	ENSOMEG00000007699	-	90	56.757
ENSOMEG00000022971	-	85	55.405	ENSOMEG00000021518	-	97	55.405
ENSOMEG00000022971	-	73	55.405	ENSOMEG00000010952	-	83	55.405
ENSOMEG00000022971	-	62	59.722	ENSOMEG00000021492	-	57	59.722
ENSOMEG00000022971	-	92	63.014	ENSOMEG00000019336	-	78	63.014
ENSOMEG00000022971	-	83	52.778	ENSOMEG00000006208	-	84	52.778
ENSOMEG00000022971	-	88	59.459	ENSOMEG00000002268	-	87	57.692

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022971	-	78	52.113	ENSAPOG00000010330	-	77	52.113	Acanthochromis_polyacanthus
ENSOMEG00000022971	-	59	55.357	ENSAPOG00000003414	-	97	55.357	Acanthochromis_polyacanthus
ENSOMEG00000022971	-	65	49.296	ENSAPOG00000010645	-	54	49.296	Acanthochromis_polyacanthus
ENSOMEG00000022971	-	62	57.778	ENSAPOG00000016615	-	75	57.778	Acanthochromis_polyacanthus
ENSOMEG00000022971	-	62	53.731	ENSAPOG00000014372	-	65	53.731	Acanthochromis_polyacanthus
ENSOMEG00000022971	-	61	55.556	ENSAOCG00000007347	-	59	55.556	Amphiprion_ocellaris
ENSOMEG00000022971	-	62	54.795	ENSAPEG00000004256	-	64	54.795	Amphiprion_percula
ENSOMEG00000022971	-	65	55.128	ENSATEG00000007658	-	66	56.757	Anabas_testudineus
ENSOMEG00000022971	-	62	53.425	ENSCING00000024717	-	65	53.425	Ciona_intestinalis
ENSOMEG00000022971	-	88	55.556	ENSCVAG00000018383	-	68	55.556	Cyprinodon_variegatus
ENSOMEG00000022971	-	62	55.405	ENSEBUG00000003418	-	92	55.405	Eptatretus_burgeri
ENSOMEG00000022971	-	73	55.556	ENSEBUG00000000436	-	66	55.556	Eptatretus_burgeri
ENSOMEG00000022971	-	81	57.143	ENSEBUG00000014768	-	67	57.143	Eptatretus_burgeri
ENSOMEG00000022971	-	88	59.459	ENSEBUG00000006666	-	79	59.459	Eptatretus_burgeri
ENSOMEG00000022971	-	62	58.108	ENSEBUG00000015472	-	60	58.108	Eptatretus_burgeri
ENSOMEG00000022971	-	74	53.425	ENSEBUG00000001569	-	75	53.425	Eptatretus_burgeri
ENSOMEG00000022971	-	62	55.556	ENSELUG00000000281	-	52	56.410	Esox_lucius
ENSOMEG00000022971	-	62	58.462	ENSGMOG00000005588	-	100	58.462	Gadus_morhua
ENSOMEG00000022971	-	62	56.250	ENSGMOG00000016007	-	77	53.333	Gadus_morhua
ENSOMEG00000022971	-	62	56.667	ENSGAFG00000021143	-	51	56.667	Gambusia_affinis
ENSOMEG00000022971	-	66	51.220	ENSHBUG00000003529	-	82	51.220	Haplochromis_burtoni
ENSOMEG00000022971	-	83	57.534	ENSHCOG00000015355	-	96	55.224	Hippocampus_comes
ENSOMEG00000022971	-	82	55.405	ENSHCOG00000001238	-	89	55.405	Hippocampus_comes
ENSOMEG00000022971	-	61	53.623	ENSHCOG00000001300	-	72	53.623	Hippocampus_comes
ENSOMEG00000022971	-	81	58.108	ENSHCOG00000001242	-	66	58.108	Hippocampus_comes
ENSOMEG00000022971	-	62	56.757	ENSHCOG00000014781	-	54	56.757	Hippocampus_comes
ENSOMEG00000022971	-	78	57.534	ENSHCOG00000001318	-	80	54.054	Hippocampus_comes
ENSOMEG00000022971	-	70	52.308	ENSLBEG00000025139	-	59	52.308	Labrus_bergylta
ENSOMEG00000022971	-	62	50.685	ENSLBEG00000022059	-	60	50.685	Labrus_bergylta
ENSOMEG00000022971	-	73	57.778	ENSLBEG00000012947	-	76	57.778	Labrus_bergylta
ENSOMEG00000022971	-	62	53.333	ENSLBEG00000011588	-	60	53.333	Labrus_bergylta
ENSOMEG00000022971	-	61	52.055	ENSMZEG00005028299	-	85	52.055	Maylandia_zebra
ENSOMEG00000022971	-	71	58.333	ENSORLG00000027009	-	70	58.333	Oryzias_latipes
ENSOMEG00000022971	-	81	63.934	ENSORLG00000000420	-	81	63.934	Oryzias_latipes
ENSOMEG00000022971	-	88	60.417	ENSORLG00000013863	-	89	60.417	Oryzias_latipes
ENSOMEG00000022971	-	92	55.224	ENSORLG00000027303	-	55	55.224	Oryzias_latipes
ENSOMEG00000022971	-	81	60.811	ENSORLG00000028381	-	85	60.811	Oryzias_latipes
ENSOMEG00000022971	-	88	55.224	ENSORLG00000028433	-	88	54.717	Oryzias_latipes
ENSOMEG00000022971	-	69	55.422	ENSORLG00000024183	-	80	55.422	Oryzias_latipes
ENSOMEG00000022971	-	62	60.563	ENSORLG00000028391	-	87	60.563	Oryzias_latipes
ENSOMEG00000022971	-	66	55.769	ENSORLG00000026191	-	96	55.769	Oryzias_latipes
ENSOMEG00000022971	-	91	57.534	ENSORLG00000028456	-	63	57.534	Oryzias_latipes
ENSOMEG00000022971	-	88	54.545	ENSORLG00000023744	-	69	54.545	Oryzias_latipes
ENSOMEG00000022971	-	88	60.811	ENSORLG00020000161	-	76	60.811	Oryzias_latipes_hni
ENSOMEG00000022971	-	81	56.757	ENSORLG00020004353	-	94	56.757	Oryzias_latipes_hni
ENSOMEG00000022971	-	80	57.895	ENSORLG00020007074	-	90	58.904	Oryzias_latipes_hni
ENSOMEG00000022971	-	68	62.857	ENSORLG00020017528	-	69	62.857	Oryzias_latipes_hni
ENSOMEG00000022971	-	100	55.405	ENSORLG00020009419	-	83	53.846	Oryzias_latipes_hni
ENSOMEG00000022971	-	88	58.108	ENSORLG00020010647	-	78	58.108	Oryzias_latipes_hni
ENSOMEG00000022971	-	88	58.209	ENSORLG00020004370	-	76	58.209	Oryzias_latipes_hni
ENSOMEG00000022971	-	73	55.319	ENSORLG00020007967	-	79	50.000	Oryzias_latipes_hni
ENSOMEG00000022971	-	62	57.447	ENSORLG00015013302	-	64	57.447	Oryzias_latipes_hsok
ENSOMEG00000022971	-	62	60.274	ENSORLG00015012627	-	63	60.274	Oryzias_latipes_hsok
ENSOMEG00000022971	-	81	56.757	ENSORLG00015009640	-	92	56.757	Oryzias_latipes_hsok
ENSOMEG00000022971	-	100	54.054	ENSORLG00015012121	-	69	54.054	Oryzias_latipes_hsok
ENSOMEG00000022971	-	63	59.211	ENSORLG00015014056	-	91	59.211	Oryzias_latipes_hsok
ENSOMEG00000022971	-	81	56.757	ENSORLG00015007164	-	86	56.757	Oryzias_latipes_hsok
ENSOMEG00000022971	-	62	55.000	ENSORLG00015016392	-	83	55.000	Oryzias_latipes_hsok
ENSOMEG00000022971	-	88	54.795	ENSORLG00015010834	-	69	54.795	Oryzias_latipes_hsok
ENSOMEG00000022971	-	88	55.224	ENSORLG00015017097	-	66	55.224	Oryzias_latipes_hsok
ENSOMEG00000022971	-	92	55.405	ENSORLG00015011153	-	77	58.974	Oryzias_latipes_hsok
ENSOMEG00000022971	-	73	55.405	ENSORLG00015012084	-	65	55.405	Oryzias_latipes_hsok
ENSOMEG00000022971	-	88	59.459	ENSORLG00015012208	-	51	59.459	Oryzias_latipes_hsok
ENSOMEG00000022971	-	93	56.757	ENSORLG00015009782	-	75	50.000	Oryzias_latipes_hsok
ENSOMEG00000022971	-	89	58.108	ENSORLG00015007986	-	86	61.644	Oryzias_latipes_hsok
ENSOMEG00000022971	-	62	59.155	ENSORLG00015000916	-	89	59.155	Oryzias_latipes_hsok
ENSOMEG00000022971	-	71	56.757	ENSORLG00015013448	-	73	56.757	Oryzias_latipes_hsok
ENSOMEG00000022971	-	62	54.795	ENSORLG00015010853	-	72	54.795	Oryzias_latipes_hsok
ENSOMEG00000022971	-	61	50.794	ENSPMGG00000002634	-	80	50.794	Periophthalmus_magnuspinnatus
ENSOMEG00000022971	-	88	62.162	ENSPMGG00000000466	-	85	62.162	Periophthalmus_magnuspinnatus
ENSOMEG00000022971	-	88	46.835	ENSPMGG00000023408	-	64	46.835	Periophthalmus_magnuspinnatus
ENSOMEG00000022971	-	83	54.795	ENSPMGG00000009574	-	84	54.795	Periophthalmus_magnuspinnatus
ENSOMEG00000022971	-	62	57.895	ENSPMAG00000007084	-	100	57.895	Petromyzon_marinus
ENSOMEG00000022971	-	89	63.014	ENSPFOG00000023732	-	72	63.014	Poecilia_formosa
ENSOMEG00000022971	-	89	61.111	ENSPFOG00000008666	-	99	61.111	Poecilia_formosa
ENSOMEG00000022971	-	73	60.274	ENSPFOG00000022634	-	65	60.274	Poecilia_formosa
ENSOMEG00000022971	-	61	55.263	ENSPLAG00000002505	-	60	55.263	Poecilia_latipinna
ENSOMEG00000022971	-	86	59.016	ENSPMEG00000013952	-	60	59.459	Poecilia_mexicana
ENSOMEG00000022971	-	63	58.209	ENSPMEG00000022886	-	58	58.209	Poecilia_mexicana
ENSOMEG00000022971	-	88	50.000	ENSPMEG00000014665	-	98	50.000	Poecilia_mexicana
ENSOMEG00000022971	-	95	54.054	ENSPNYG00000005202	-	94	54.054	Pundamilia_nyererei
ENSOMEG00000022971	-	60	52.632	ENSPNAG00000027676	-	91	52.632	Pygocentrus_nattereri
ENSOMEG00000022971	-	62	57.627	ENSSLDG00000000202	-	67	57.627	Seriola_lalandi_dorsalis
ENSOMEG00000022971	-	81	56.164	ENSSLDG00000001860	-	82	56.164	Seriola_lalandi_dorsalis
ENSOMEG00000022971	-	62	46.575	ENSXCOG00000009674	-	75	46.575	Xiphophorus_couchianus