EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000022976 (Gene tree)
Gene ID: 112162820
Gene Symbol: rcl1
Alias: -
Full Name: RNA terminal phosphate cyclase-like 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 11848 bases
Position: chrNVQA01000031.1:15186171-15198018
Accession: ZDB-GENE-040930-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000035624	RTC	PF01137.21	1.1e-58	1	1
ENSOMEP00000021076	RTC	PF01137.21	5.1e-48	1	2
ENSOMEP00000021076	RTC	PF01137.21	5.1e-48	2	2
ENSOMEP00000021076	RTC_insert	PF05189.13	4.5e-37	1	1
ENSOMEP00000035624	RTC_insert	PF05189.13	5e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000030684	-	5473	-	ENSOMEP00000035624	424 (aa)	-	-
ENSOMET00000030676	-	1203	-	ENSOMEP00000021076	400 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000022976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000022976's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000022976	rcl1	88	78.075	ENSG00000120158	RCL1	100	81.019	Homo_sapiens
ENSOMEG00000022976	rcl1	88	90.054	ENSAPOG00000015666	rcl1	100	90.054	Acanthochromis_polyacanthus
ENSOMEG00000022976	rcl1	88	79.144	ENSAMEG00000002631	RCL1	100	79.144	Ailuropoda_melanoleuca
ENSOMEG00000022976	rcl1	88	90.323	ENSACIG00000021195	rcl1	100	90.323	Amphilophus_citrinellus
ENSOMEG00000022976	rcl1	88	89.785	ENSAOCG00000002223	rcl1	100	89.785	Amphiprion_ocellaris
ENSOMEG00000022976	rcl1	88	90.591	ENSAPEG00000006905	rcl1	100	90.591	Amphiprion_percula
ENSOMEG00000022976	rcl1	88	87.634	ENSATEG00000020026	rcl1	100	87.634	Anabas_testudineus
ENSOMEG00000022976	rcl1	78	75.380	ENSAPLG00000006031	RCL1	100	75.380	Anas_platyrhynchos
ENSOMEG00000022976	rcl1	88	73.797	ENSACAG00000003640	RCL1	100	73.797	Anolis_carolinensis
ENSOMEG00000022976	rcl1	88	77.540	ENSANAG00000037372	RCL1	100	77.540	Aotus_nancymaae
ENSOMEG00000022976	rcl1	88	88.978	ENSACLG00000021724	rcl1	100	88.978	Astatotilapia_calliptera
ENSOMEG00000022976	rcl1	87	81.250	ENSAMXG00000033394	rcl1	99	81.250	Astyanax_mexicanus
ENSOMEG00000022976	rcl1	88	46.032	WBGene00022852	ZK1127.5	99	46.032	Caenorhabditis_elegans
ENSOMEG00000022976	rcl1	88	77.807	ENSCJAG00000011202	RCL1	100	77.807	Callithrix_jacchus
ENSOMEG00000022976	rcl1	88	79.144	ENSCAFG00000002091	RCL1	100	79.144	Canis_familiaris
ENSOMEG00000022976	rcl1	88	79.144	ENSCAFG00020000638	RCL1	78	79.144	Canis_lupus_dingo
ENSOMEG00000022976	rcl1	88	77.540	ENSCHIG00000012407	RCL1	100	77.540	Capra_hircus
ENSOMEG00000022976	rcl1	77	79.573	ENSTSYG00000009592	RCL1	97	81.868	Carlito_syrichta
ENSOMEG00000022976	rcl1	60	66.474	ENSCAPG00000013575	RCL1	100	66.474	Cavia_aperea
ENSOMEG00000022976	rcl1	88	77.540	ENSCPOG00000015354	RCL1	100	77.540	Cavia_porcellus
ENSOMEG00000022976	rcl1	88	77.807	ENSCCAG00000033505	RCL1	100	77.807	Cebus_capucinus
ENSOMEG00000022976	rcl1	88	78.075	ENSCATG00000034721	RCL1	100	78.075	Cercocebus_atys
ENSOMEG00000022976	rcl1	88	78.075	ENSCLAG00000007445	RCL1	100	78.075	Chinchilla_lanigera
ENSOMEG00000022976	rcl1	88	78.075	ENSCSAG00000008811	RCL1	100	78.075	Chlorocebus_sabaeus
ENSOMEG00000022976	rcl1	76	69.350	ENSCHOG00000007216	RCL1	100	69.350	Choloepus_hoffmanni
ENSOMEG00000022976	rcl1	88	75.668	ENSCPBG00000025481	RCL1	94	76.364	Chrysemys_picta_bellii
ENSOMEG00000022976	rcl1	88	59.151	ENSCING00000019565	-	100	59.151	Ciona_intestinalis
ENSOMEG00000022976	rcl1	88	78.075	ENSCANG00000027099	RCL1	100	78.075	Colobus_angolensis_palliatus
ENSOMEG00000022976	rcl1	88	78.877	ENSCGRG00001013748	Rcl1	100	78.877	Cricetulus_griseus_chok1gshd
ENSOMEG00000022976	rcl1	78	79.939	ENSCGRG00000005843	Rcl1	99	79.939	Cricetulus_griseus_crigri
ENSOMEG00000022976	rcl1	90	86.911	ENSCSEG00000000712	rcl1	100	86.236	Cynoglossus_semilaevis
ENSOMEG00000022976	rcl1	88	89.785	ENSCVAG00000011536	rcl1	100	89.785	Cyprinodon_variegatus
ENSOMEG00000022976	rcl1	87	79.837	ENSDARG00000038312	rcl1	100	79.837	Danio_rerio
ENSOMEG00000022976	rcl1	67	78.571	ENSDNOG00000019911	RCL1	100	81.481	Dasypus_novemcinctus
ENSOMEG00000022976	rcl1	87	78.591	ENSDORG00000015645	Rcl1	99	78.591	Dipodomys_ordii
ENSOMEG00000022976	rcl1	88	52.895	FBgn0020909	Rtc1	99	53.684	Drosophila_melanogaster
ENSOMEG00000022976	rcl1	77	56.098	ENSETEG00000014087	-	100	56.098	Echinops_telfairi
ENSOMEG00000022976	rcl1	88	54.960	ENSEBUG00000016621	-	99	54.960	Eptatretus_burgeri
ENSOMEG00000022976	rcl1	88	77.540	ENSEASG00005010653	RCL1	100	77.540	Equus_asinus_asinus
ENSOMEG00000022976	rcl1	88	77.540	ENSECAG00000015973	RCL1	100	77.540	Equus_caballus
ENSOMEG00000022976	rcl1	87	66.667	ENSEEUG00000009801	RCL1	99	66.667	Erinaceus_europaeus
ENSOMEG00000022976	rcl1	88	79.570	ENSELUG00000007353	rcl1	100	79.570	Esox_lucius
ENSOMEG00000022976	rcl1	88	77.807	ENSFCAG00000014557	RCL1	100	77.807	Felis_catus
ENSOMEG00000022976	rcl1	89	68.085	ENSFALG00000010553	RCL1	98	68.085	Ficedula_albicollis
ENSOMEG00000022976	rcl1	77	77.134	ENSFDAG00000004209	RCL1	100	77.134	Fukomys_damarensis
ENSOMEG00000022976	rcl1	94	85.390	ENSFHEG00000011228	rcl1	100	90.054	Fundulus_heteroclitus
ENSOMEG00000022976	rcl1	88	82.796	ENSGMOG00000004677	rcl1	100	82.796	Gadus_morhua
ENSOMEG00000022976	rcl1	87	75.068	ENSGALG00000015024	RCL1	98	75.068	Gallus_gallus
ENSOMEG00000022976	rcl1	88	89.516	ENSGAFG00000007257	rcl1	100	89.516	Gambusia_affinis
ENSOMEG00000022976	rcl1	88	88.441	ENSGACG00000017474	rcl1	100	88.441	Gasterosteus_aculeatus
ENSOMEG00000022976	rcl1	88	75.668	ENSGAGG00000003689	RCL1	100	75.668	Gopherus_agassizii
ENSOMEG00000022976	rcl1	88	77.540	ENSGGOG00000015041	RCL1	100	77.540	Gorilla_gorilla
ENSOMEG00000022976	rcl1	88	89.247	ENSHBUG00000001393	rcl1	100	89.247	Haplochromis_burtoni
ENSOMEG00000022976	rcl1	88	64.439	ENSHGLG00000005368	-	100	64.439	Heterocephalus_glaber_female
ENSOMEG00000022976	rcl1	88	77.540	ENSHGLG00000016452	RCL1	100	77.540	Heterocephalus_glaber_female
ENSOMEG00000022976	rcl1	88	65.508	ENSHGLG00100018010	-	100	65.508	Heterocephalus_glaber_male
ENSOMEG00000022976	rcl1	88	72.727	ENSHGLG00100008718	-	100	72.727	Heterocephalus_glaber_male
ENSOMEG00000022976	rcl1	88	88.441	ENSHCOG00000020170	rcl1	100	88.441	Hippocampus_comes
ENSOMEG00000022976	rcl1	87	82.834	ENSIPUG00000018054	RCL1	99	82.834	Ictalurus_punctatus
ENSOMEG00000022976	rcl1	88	77.540	ENSSTOG00000000023	RCL1	100	77.540	Ictidomys_tridecemlineatus
ENSOMEG00000022976	rcl1	87	79.404	ENSJJAG00000022803	-	99	79.404	Jaculus_jaculus
ENSOMEG00000022976	rcl1	87	69.648	ENSJJAG00000015632	-	99	69.648	Jaculus_jaculus
ENSOMEG00000022976	rcl1	51	61.881	ENSJJAG00000000764	-	98	61.881	Jaculus_jaculus
ENSOMEG00000022976	rcl1	88	91.667	ENSKMAG00000011946	rcl1	100	91.667	Kryptolebias_marmoratus
ENSOMEG00000022976	rcl1	88	84.140	ENSLBEG00000003957	rcl1	100	84.140	Labrus_bergylta
ENSOMEG00000022976	rcl1	82	74.277	ENSLACG00000004594	RCL1	100	78.571	Latimeria_chalumnae
ENSOMEG00000022976	rcl1	88	81.183	ENSLOCG00000010148	rcl1	98	81.183	Lepisosteus_oculatus
ENSOMEG00000022976	rcl1	87	76.486	ENSLAFG00000017495	RCL1	99	76.486	Loxodonta_africana
ENSOMEG00000022976	rcl1	88	78.075	ENSMFAG00000037906	RCL1	100	78.075	Macaca_fascicularis
ENSOMEG00000022976	rcl1	88	78.075	ENSMNEG00000012288	RCL1	100	78.075	Macaca_nemestrina
ENSOMEG00000022976	rcl1	88	78.075	ENSMLEG00000043088	RCL1	100	78.075	Mandrillus_leucophaeus
ENSOMEG00000022976	rcl1	88	89.516	ENSMAMG00000008311	rcl1	100	89.516	Mastacembelus_armatus
ENSOMEG00000022976	rcl1	88	88.978	ENSMZEG00005017292	rcl1	100	88.978	Maylandia_zebra
ENSOMEG00000022976	rcl1	54	73.636	ENSMGAG00000002245	RCL1	100	73.636	Meleagris_gallopavo
ENSOMEG00000022976	rcl1	54	81.944	ENSMAUG00000008922	Rcl1	100	81.944	Mesocricetus_auratus
ENSOMEG00000022976	rcl1	88	78.610	ENSMICG00000015562	RCL1	100	78.610	Microcebus_murinus
ENSOMEG00000022976	rcl1	88	78.610	ENSMOCG00000012145	Rcl1	100	78.610	Microtus_ochrogaster
ENSOMEG00000022976	rcl1	88	85.523	ENSMMOG00000021264	rcl1	100	85.523	Mola_mola
ENSOMEG00000022976	rcl1	83	77.247	ENSMODG00000015377	RCL1	94	77.247	Monodelphis_domestica
ENSOMEG00000022976	rcl1	88	88.978	ENSMALG00000018618	rcl1	100	88.978	Monopterus_albus
ENSOMEG00000022976	rcl1	88	78.610	MGP_CAROLIEiJ_G0022853	Rcl1	100	78.610	Mus_caroli
ENSOMEG00000022976	rcl1	88	78.075	ENSMUSG00000024785	Rcl1	100	78.075	Mus_musculus
ENSOMEG00000022976	rcl1	88	78.877	MGP_PahariEiJ_G0014346	Rcl1	100	81.287	Mus_pahari
ENSOMEG00000022976	rcl1	88	78.075	MGP_SPRETEiJ_G0023771	Rcl1	100	80.702	Mus_spretus
ENSOMEG00000022976	rcl1	88	78.342	ENSMPUG00000004998	RCL1	100	78.342	Mustela_putorius_furo
ENSOMEG00000022976	rcl1	88	77.273	ENSMLUG00000009654	RCL1	100	77.273	Myotis_lucifugus
ENSOMEG00000022976	rcl1	88	78.075	ENSNGAG00000015327	Rcl1	100	78.075	Nannospalax_galili
ENSOMEG00000022976	rcl1	81	86.006	ENSNBRG00000019854	rcl1	99	82.597	Neolamprologus_brichardi
ENSOMEG00000022976	rcl1	88	75.401	ENSNLEG00000008891	RCL1	100	75.401	Nomascus_leucogenys
ENSOMEG00000022976	rcl1	88	71.123	ENSMEUG00000007653	RCL1	100	71.123	Notamacropus_eugenii
ENSOMEG00000022976	rcl1	88	76.471	ENSOPRG00000010965	RCL1	100	76.471	Ochotona_princeps
ENSOMEG00000022976	rcl1	78	66.261	ENSODEG00000004151	RCL1	96	66.261	Octodon_degus
ENSOMEG00000022976	rcl1	88	89.785	ENSONIG00000003871	rcl1	100	89.785	Oreochromis_niloticus
ENSOMEG00000022976	rcl1	62	75.904	ENSOANG00000013193	-	98	75.904	Ornithorhynchus_anatinus
ENSOMEG00000022976	rcl1	88	77.807	ENSOCUG00000008161	RCL1	100	77.807	Oryctolagus_cuniculus
ENSOMEG00000022976	rcl1	88	96.774	ENSORLG00000010443	rcl1	100	96.774	Oryzias_latipes
ENSOMEG00000022976	rcl1	88	97.043	ENSORLG00020012211	rcl1	100	97.043	Oryzias_latipes_hni
ENSOMEG00000022976	rcl1	88	96.505	ENSORLG00015001122	rcl1	100	96.505	Oryzias_latipes_hsok
ENSOMEG00000022976	rcl1	87	78.049	ENSOGAG00000007480	RCL1	99	78.049	Otolemur_garnettii
ENSOMEG00000022976	rcl1	88	77.540	ENSOARG00000013463	RCL1	100	77.540	Ovis_aries
ENSOMEG00000022976	rcl1	88	77.807	ENSPPAG00000037958	RCL1	100	77.807	Pan_paniscus
ENSOMEG00000022976	rcl1	88	77.273	ENSPPRG00000022645	RCL1	100	77.273	Panthera_pardus
ENSOMEG00000022976	rcl1	77	78.593	ENSPTIG00000019031	RCL1	100	80.093	Panthera_tigris_altaica
ENSOMEG00000022976	rcl1	88	77.540	ENSPTRG00000020743	RCL1	97	80.769	Pan_troglodytes
ENSOMEG00000022976	rcl1	88	78.075	ENSPANG00000025151	RCL1	100	78.075	Papio_anubis
ENSOMEG00000022976	rcl1	88	79.570	ENSPKIG00000021022	rcl1	100	79.570	Paramormyrops_kingsleyae
ENSOMEG00000022976	rcl1	78	76.596	ENSPSIG00000012302	RCL1	100	76.596	Pelodiscus_sinensis
ENSOMEG00000022976	rcl1	88	87.634	ENSPMGG00000024007	rcl1	100	87.634	Periophthalmus_magnuspinnatus
ENSOMEG00000022976	rcl1	88	78.877	ENSPEMG00000023275	Rcl1	100	78.877	Peromyscus_maniculatus_bairdii
ENSOMEG00000022976	rcl1	85	30.194	ENSPMAG00000009110	rtca	96	30.194	Petromyzon_marinus
ENSOMEG00000022976	rcl1	88	77.540	ENSPCIG00000000188	RCL1	100	77.540	Phascolarctos_cinereus
ENSOMEG00000022976	rcl1	88	89.247	ENSPFOG00000019682	rcl1	99	89.247	Poecilia_formosa
ENSOMEG00000022976	rcl1	88	89.247	ENSPLAG00000022354	rcl1	100	89.247	Poecilia_latipinna
ENSOMEG00000022976	rcl1	88	89.247	ENSPMEG00000008131	rcl1	100	89.247	Poecilia_mexicana
ENSOMEG00000022976	rcl1	88	88.710	ENSPREG00000008032	rcl1	100	88.710	Poecilia_reticulata
ENSOMEG00000022976	rcl1	88	77.807	ENSPPYG00000019244	RCL1	100	77.807	Pongo_abelii
ENSOMEG00000022976	rcl1	87	70.811	ENSPCAG00000001440	RCL1	99	70.811	Procavia_capensis
ENSOMEG00000022976	rcl1	88	78.342	ENSPCOG00000009611	RCL1	100	78.342	Propithecus_coquereli
ENSOMEG00000022976	rcl1	88	77.540	ENSPVAG00000015752	RCL1	100	77.540	Pteropus_vampyrus
ENSOMEG00000022976	rcl1	88	89.247	ENSPNYG00000012910	rcl1	100	89.247	Pundamilia_nyererei
ENSOMEG00000022976	rcl1	97	76.699	ENSPNAG00000028307	rcl1	99	76.699	Pygocentrus_nattereri
ENSOMEG00000022976	rcl1	88	78.075	ENSRNOG00000015491	Rcl1	100	78.075	Rattus_norvegicus
ENSOMEG00000022976	rcl1	88	77.807	ENSRBIG00000035818	RCL1	100	77.807	Rhinopithecus_bieti
ENSOMEG00000022976	rcl1	88	78.075	ENSRROG00000029781	RCL1	100	78.075	Rhinopithecus_roxellana
ENSOMEG00000022976	rcl1	86	38.275	YOL010W	-	97	38.275	Saccharomyces_cerevisiae
ENSOMEG00000022976	rcl1	88	78.075	ENSSBOG00000026369	RCL1	100	78.075	Saimiri_boliviensis_boliviensis
ENSOMEG00000022976	rcl1	78	78.550	ENSSHAG00000014086	RCL1	100	78.550	Sarcophilus_harrisii
ENSOMEG00000022976	rcl1	88	79.570	ENSSFOG00015023020	rcl1	100	79.570	Scleropages_formosus
ENSOMEG00000022976	rcl1	93	86.548	ENSSMAG00000019751	rcl1	91	86.548	Scophthalmus_maximus
ENSOMEG00000022976	rcl1	88	91.129	ENSSDUG00000006349	rcl1	100	91.129	Seriola_dumerili
ENSOMEG00000022976	rcl1	88	90.323	ENSSLDG00000022076	rcl1	100	90.323	Seriola_lalandi_dorsalis
ENSOMEG00000022976	rcl1	88	78.075	ENSSARG00000009260	RCL1	100	78.075	Sorex_araneus
ENSOMEG00000022976	rcl1	88	75.668	ENSSPUG00000016330	RCL1	100	75.668	Sphenodon_punctatus
ENSOMEG00000022976	rcl1	88	90.860	ENSSPAG00000018038	rcl1	100	90.860	Stegastes_partitus
ENSOMEG00000022976	rcl1	88	77.454	ENSSSCG00000005217	RCL1	84	77.454	Sus_scrofa
ENSOMEG00000022976	rcl1	87	74.124	ENSTGUG00000005138	RCL1	99	74.124	Taeniopygia_guttata
ENSOMEG00000022976	rcl1	88	86.290	ENSTRUG00000010493	rcl1	100	86.290	Takifugu_rubripes
ENSOMEG00000022976	rcl1	88	84.718	ENSTNIG00000013214	rcl1	99	84.718	Tetraodon_nigroviridis
ENSOMEG00000022976	rcl1	88	73.529	ENSTBEG00000016339	RCL1	100	73.529	Tupaia_belangeri
ENSOMEG00000022976	rcl1	88	77.540	ENSTTRG00000016525	RCL1	100	77.540	Tursiops_truncatus
ENSOMEG00000022976	rcl1	88	79.144	ENSUAMG00000005598	RCL1	100	80.556	Ursus_americanus
ENSOMEG00000022976	rcl1	77	79.573	ENSUMAG00000017890	RCL1	97	79.573	Ursus_maritimus
ENSOMEG00000022976	rcl1	77	79.268	ENSVPAG00000009188	RCL1	100	79.268	Vicugna_pacos
ENSOMEG00000022976	rcl1	78	80.547	ENSVVUG00000007304	RCL1	89	80.547	Vulpes_vulpes
ENSOMEG00000022976	rcl1	88	70.933	ENSXETG00000000592	rcl1	100	70.933	Xenopus_tropicalis
ENSOMEG00000022976	rcl1	50	31.163	ENSXCOG00000008002	rtca	62	31.163	Xiphophorus_couchianus
ENSOMEG00000022976	rcl1	88	89.516	ENSXCOG00000004922	rcl1	100	89.516	Xiphophorus_couchianus
ENSOMEG00000022976	rcl1	88	89.516	ENSXMAG00000022366	RCL1	100	89.516	Xiphophorus_maculatus