EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000023060 (Gene tree)
Gene ID: 112163082
Gene Symbol: exd3
Alias: -
Full Name: exonuclease 3'-5' domain containing 3
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 37576 bases
Position: chrNVQA01000031.1:15128087-15165662
Accession: 112163082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000021147	DNA_pol_A_exo1	PF01612.20	2e-21	1	1
ENSOMEP00000021179	DNA_pol_A_exo1	PF01612.20	2.4e-21	1	1
ENSOMEP00000021128	DNA_pol_A_exo1	PF01612.20	2.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000036449	-	4798	-	ENSOMEP00000021128	908 (aa)	-	-
ENSOMET00000030812	-	4690	-	ENSOMEP00000021179	887 (aa)	XP_024154992	UPI000CF7E8D1
ENSOMET00000036456	-	4521	-	ENSOMEP00000021147	812 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000023060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000023060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000023060	exd3	97	40.000	ENSG00000187609	EXD3	96	39.886	Homo_sapiens
ENSOMEG00000023060	exd3	90	79.208	ENSAPOG00000015520	exd3	96	79.208	Acanthochromis_polyacanthus
ENSOMEG00000023060	exd3	99	68.023	ENSACIG00000005561	exd3	91	71.529	Amphilophus_citrinellus
ENSOMEG00000023060	exd3	98	74.545	ENSAOCG00000007721	exd3	97	74.545	Amphiprion_ocellaris
ENSOMEG00000023060	exd3	98	74.886	ENSAPEG00000007019	exd3	98	74.886	Amphiprion_percula
ENSOMEG00000023060	exd3	98	72.489	ENSATEG00000019941	exd3	98	72.374	Anabas_testudineus
ENSOMEG00000023060	exd3	87	45.868	ENSAPLG00000015358	EXD3	99	45.317	Anas_platyrhynchos
ENSOMEG00000023060	exd3	97	36.571	ENSANAG00000019674	EXD3	96	36.571	Aotus_nancymaae
ENSOMEG00000023060	exd3	98	73.600	ENSACLG00000021922	exd3	98	73.600	Astatotilapia_calliptera
ENSOMEG00000023060	exd3	98	52.027	ENSAMXG00000019494	exd3	98	52.041	Astyanax_mexicanus
ENSOMEG00000023060	exd3	96	39.510	ENSBTAG00000023788	EXD3	98	39.581	Bos_taurus
ENSOMEG00000023060	exd3	97	37.344	ENSCJAG00000013170	EXD3	96	37.344	Callithrix_jacchus
ENSOMEG00000023060	exd3	97	40.226	ENSCAFG00000019444	EXD3	98	40.315	Canis_familiaris
ENSOMEG00000023060	exd3	98	37.885	ENSCAFG00020003171	EXD3	91	39.815	Canis_lupus_dingo
ENSOMEG00000023060	exd3	97	37.927	ENSCCAG00000027996	EXD3	96	38.041	Cebus_capucinus
ENSOMEG00000023060	exd3	98	40.181	ENSCSAG00000016661	EXD3	96	40.068	Chlorocebus_sabaeus
ENSOMEG00000023060	exd3	88	44.565	ENSCPBG00000011686	EXD3	89	44.565	Chrysemys_picta_bellii
ENSOMEG00000023060	exd3	92	30.035	ENSCING00000002195	-	99	30.035	Ciona_intestinalis
ENSOMEG00000023060	exd3	97	40.137	ENSCANG00000040692	EXD3	96	40.023	Colobus_angolensis_palliatus
ENSOMEG00000023060	exd3	99	67.731	ENSCSEG00000000750	exd3	98	67.965	Cynoglossus_semilaevis
ENSOMEG00000023060	exd3	99	72.072	ENSCVAG00000011560	exd3	99	72.072	Cyprinodon_variegatus
ENSOMEG00000023060	exd3	98	53.617	ENSDARG00000063140	exd3	99	53.731	Danio_rerio
ENSOMEG00000023060	exd3	98	38.317	ENSEASG00005016023	EXD3	96	39.744	Equus_asinus_asinus
ENSOMEG00000023060	exd3	97	39.359	ENSECAG00000017546	EXD3	95	39.225	Equus_caballus
ENSOMEG00000023060	exd3	72	43.622	ENSEEUG00000000405	-	89	40.129	Erinaceus_europaeus
ENSOMEG00000023060	exd3	98	57.692	ENSELUG00000007181	exd3	98	57.692	Esox_lucius
ENSOMEG00000023060	exd3	97	38.122	ENSFCAG00000003579	EXD3	96	38.235	Felis_catus
ENSOMEG00000023060	exd3	96	41.282	ENSFALG00000005132	EXD3	99	42.755	Ficedula_albicollis
ENSOMEG00000023060	exd3	98	65.906	ENSFHEG00000011352	exd3	98	65.906	Fundulus_heteroclitus
ENSOMEG00000023060	exd3	50	43.382	ENSGMOG00000013542	-	99	43.478	Gadus_morhua
ENSOMEG00000023060	exd3	87	54.717	ENSGALG00000052646	EXD3	91	54.717	Gallus_gallus
ENSOMEG00000023060	exd3	99	71.348	ENSGAFG00000007328	exd3	99	70.668	Gambusia_affinis
ENSOMEG00000023060	exd3	88	66.620	ENSGACG00000017442	exd3	100	66.621	Gasterosteus_aculeatus
ENSOMEG00000023060	exd3	87	39.532	ENSGAGG00000011888	EXD3	93	39.532	Gopherus_agassizii
ENSOMEG00000023060	exd3	80	54.491	ENSGGOG00000024724	EXD3	94	50.833	Gorilla_gorilla
ENSOMEG00000023060	exd3	98	73.714	ENSHBUG00000001405	exd3	98	73.714	Haplochromis_burtoni
ENSOMEG00000023060	exd3	98	65.034	ENSHCOG00000020087	exd3	99	65.034	Hippocampus_comes
ENSOMEG00000023060	exd3	98	50.795	ENSIPUG00000020343	exd3	99	51.419	Ictalurus_punctatus
ENSOMEG00000023060	exd3	98	74.403	ENSKMAG00000011881	exd3	98	74.403	Kryptolebias_marmoratus
ENSOMEG00000023060	exd3	99	63.909	ENSLBEG00000004079	exd3	95	68.214	Labrus_bergylta
ENSOMEG00000023060	exd3	89	63.889	ENSLOCG00000002330	exd3	99	50.169	Lepisosteus_oculatus
ENSOMEG00000023060	exd3	91	39.262	ENSLAFG00000001122	EXD3	99	38.999	Loxodonta_africana
ENSOMEG00000023060	exd3	97	40.317	ENSMFAG00000037569	EXD3	96	40.204	Macaca_fascicularis
ENSOMEG00000023060	exd3	97	45.918	ENSMNEG00000033487	EXD3	96	39.977	Macaca_nemestrina
ENSOMEG00000023060	exd3	97	38.655	ENSMLEG00000040548	EXD3	95	38.426	Mandrillus_leucophaeus
ENSOMEG00000023060	exd3	94	66.667	ENSMAMG00000008407	exd3	98	70.013	Mastacembelus_armatus
ENSOMEG00000023060	exd3	98	73.600	ENSMZEG00005017270	exd3	98	73.600	Maylandia_zebra
ENSOMEG00000023060	exd3	87	43.169	ENSMGAG00000001267	EXD3	99	42.486	Meleagris_gallopavo
ENSOMEG00000023060	exd3	96	66.392	ENSMMOG00000021267	exd3	99	66.392	Mola_mola
ENSOMEG00000023060	exd3	63	39.597	ENSMODG00000028091	-	99	41.818	Monodelphis_domestica
ENSOMEG00000023060	exd3	99	67.544	ENSMALG00000018523	exd3	98	68.467	Monopterus_albus
ENSOMEG00000023060	exd3	98	38.000	ENSMPUG00000015130	EXD3	96	39.160	Mustela_putorius_furo
ENSOMEG00000023060	exd3	99	69.492	ENSNBRG00000019734	exd3	99	69.944	Neolamprologus_brichardi
ENSOMEG00000023060	exd3	87	40.437	ENSNLEG00000009095	-	94	40.301	Nomascus_leucogenys
ENSOMEG00000023060	exd3	87	70.041	ENSONIG00000003880	exd3	97	70.270	Oreochromis_niloticus
ENSOMEG00000023060	exd3	87	39.563	ENSOANG00000012485	-	98	39.563	Ornithorhynchus_anatinus
ENSOMEG00000023060	exd3	100	86.922	ENSORLG00000010377	exd3	99	87.035	Oryzias_latipes
ENSOMEG00000023060	exd3	100	87.373	ENSORLG00020012287	exd3	99	87.035	Oryzias_latipes_hni
ENSOMEG00000023060	exd3	100	86.809	ENSORLG00015001156	exd3	100	86.922	Oryzias_latipes_hsok
ENSOMEG00000023060	exd3	97	39.841	ENSPPAG00000042435	EXD3	96	39.909	Pan_paniscus
ENSOMEG00000023060	exd3	97	38.870	ENSPPRG00000004634	EXD3	96	39.008	Panthera_pardus
ENSOMEG00000023060	exd3	97	39.225	ENSPANG00000026338	EXD3	96	39.225	Papio_anubis
ENSOMEG00000023060	exd3	98	52.961	ENSPKIG00000021103	exd3	99	52.847	Paramormyrops_kingsleyae
ENSOMEG00000023060	exd3	97	40.794	ENSPSIG00000007745	EXD3	98	40.872	Pelodiscus_sinensis
ENSOMEG00000023060	exd3	99	63.791	ENSPMGG00000023999	exd3	99	63.265	Periophthalmus_magnuspinnatus
ENSOMEG00000023060	exd3	69	37.435	ENSPMAG00000006135	-	99	37.608	Petromyzon_marinus
ENSOMEG00000023060	exd3	97	41.601	ENSPCIG00000006180	-	97	41.488	Phascolarctos_cinereus
ENSOMEG00000023060	exd3	99	66.629	ENSPFOG00000019685	exd3	99	70.311	Poecilia_formosa
ENSOMEG00000023060	exd3	95	67.658	ENSPLAG00000022290	exd3	99	70.435	Poecilia_latipinna
ENSOMEG00000023060	exd3	99	72.285	ENSPMEG00000008007	exd3	99	71.946	Poecilia_mexicana
ENSOMEG00000023060	exd3	99	71.687	ENSPREG00000008142	exd3	99	71.348	Poecilia_reticulata
ENSOMEG00000023060	exd3	98	73.600	ENSPNYG00000012849	exd3	98	73.600	Pundamilia_nyererei
ENSOMEG00000023060	exd3	98	52.847	ENSPNAG00000016753	exd3	99	52.435	Pygocentrus_nattereri
ENSOMEG00000023060	exd3	97	39.225	ENSRBIG00000031855	EXD3	96	38.769	Rhinopithecus_bieti
ENSOMEG00000023060	exd3	97	39.453	ENSRROG00000040120	EXD3	96	38.997	Rhinopithecus_roxellana
ENSOMEG00000023060	exd3	97	37.371	ENSSBOG00000022389	EXD3	91	37.371	Saimiri_boliviensis_boliviensis
ENSOMEG00000023060	exd3	88	40.847	ENSSHAG00000001276	-	97	41.257	Sarcophilus_harrisii
ENSOMEG00000023060	exd3	99	52.794	ENSSFOG00015023063	exd3	99	49.653	Scleropages_formosus
ENSOMEG00000023060	exd3	99	71.091	ENSSMAG00000019809	exd3	99	71.091	Scophthalmus_maximus
ENSOMEG00000023060	exd3	94	69.462	ENSSDUG00000006265	exd3	98	72.625	Seriola_dumerili
ENSOMEG00000023060	exd3	92	72.838	ENSSLDG00000004671	exd3	100	72.606	Seriola_lalandi_dorsalis
ENSOMEG00000023060	exd3	98	73.948	ENSSPAG00000017972	exd3	98	73.948	Stegastes_partitus
ENSOMEG00000023060	exd3	95	36.583	ENSSSCG00000005855	EXD3	97	38.889	Sus_scrofa
ENSOMEG00000023060	exd3	87	43.776	ENSTGUG00000002494	EXD3	99	43.333	Taeniopygia_guttata
ENSOMEG00000023060	exd3	99	63.728	ENSTRUG00000010236	exd3	95	63.728	Takifugu_rubripes
ENSOMEG00000023060	exd3	87	60.982	ENSTNIG00000013212	exd3	93	63.038	Tetraodon_nigroviridis
ENSOMEG00000023060	exd3	55	51.351	ENSTTRG00000003815	-	53	48.649	Tursiops_truncatus
ENSOMEG00000023060	exd3	95	37.315	ENSUAMG00000021470	EXD3	98	39.376	Ursus_americanus
ENSOMEG00000023060	exd3	98	38.132	ENSVVUG00000029403	EXD3	92	40.116	Vulpes_vulpes
ENSOMEG00000023060	exd3	95	68.114	ENSXMAG00000001467	exd3	99	70.771	Xiphophorus_maculatus