EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSOMEG00000023078 (Gene tree)
Gene ID
112146764
Gene Symbol
rab5c
Alias
-
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Oryzias_melastigma
Status
putative
Strand
Plus strand
Length
16956 bases
Position
chrNVQA01000010.1:17382395-17399350
Accession
112146764
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSOMEP00000021202MMR_HSR1PF01926.237.7e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSOMET00000036488-4301-ENSOMEP00000021202218 (aa)XP_024128514UPI0000EA0CC8
Gene Model
Click here to download ENSOMEG00000023078's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000023078's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSOMEG00000023078rab5c5431.148ENSOMEG00000001959arl8ba6231.148
ENSOMEG00000023078rab5c7734.286ENSOMEG00000000162rab9a8534.286
ENSOMEG00000023078rab5c7634.132ENSOMEG00000016685zgc:555588934.132
ENSOMEG00000023078rab5c8943.590ENSOMEG00000009074-8147.239
ENSOMEG00000023078rab5c9140.909ENSOMEG00000003623rab149240.909
ENSOMEG00000023078rab5c8944.898ENSOMEG00000006036rab1ab8047.853
ENSOMEG00000023078rab5c7337.107ENSOMEG00000008576rabl27137.107
ENSOMEG00000023078rab5c7233.544ENSOMEG00000001706rab237435.526
ENSOMEG00000023078rab5c9043.781ENSOMEG00000010510rab25a9543.781
ENSOMEG00000023078rab5c7631.737ENSOMEG00000018719hrasb8731.737
ENSOMEG00000023078rab5c7437.952ENSOMEG00000017306rab33a6137.952
ENSOMEG00000023078rab5c7031.818ENSOMEG00000013685rheb8331.818
ENSOMEG00000023078rab5c7743.114ENSOMEG00000017258RAB418242.529
ENSOMEG00000023078rab5c7742.262ENSOMEG00000016752rab2a7643.478
ENSOMEG00000023078rab5c7240.506ENSOMEG00000015474si:dkey-16l2.169635.500
ENSOMEG00000023078rab5c8937.113ENSOMEG00000008210rab138141.615
ENSOMEG00000023078rab5c8735.500ENSOMEG00000017958si:dkey-34d22.57536.747
ENSOMEG00000023078rab5c7235.000ENSOMEG00000010334rab34b6535.000
ENSOMEG00000023078rab5c7339.623ENSOMEG00000019462RAB157639.623
ENSOMEG00000023078rab5c8940.415ENSOMEG00000014206rab6ba8243.529
ENSOMEG00000023078rab5c8941.667ENSOMEG00000002562-7546.626
ENSOMEG00000023078rab5c8235.602ENSOMEG00000019819rab33ba8035.079
ENSOMEG00000023078rab5c9041.748ENSOMEG00000017806-7546.626
ENSOMEG00000023078rab5c7437.805ENSOMEG00000017881-7737.805
ENSOMEG00000023078rab5c7231.875ENSOMEG00000003647rab34a5331.875
ENSOMEG00000023078rab5c7639.181ENSOMEG00000013128zgc:1015597339.181
ENSOMEG00000023078rab5c7835.260ENSOMEG00000023716opn1sw27936.196
ENSOMEG00000023078rab5c7944.068ENSOMEG00000010156-8544.068
ENSOMEG00000023078rab5c9039.594ENSOMEG00000023625rab6bb8841.520
ENSOMEG00000023078rab5c7744.311ENSOMEG00000001613rab308244.311
ENSOMEG00000023078rab5c7447.205ENSOMEG00000002581rab11ba7447.205
ENSOMEG00000023078rab5c8341.837ENSOMEG00000007546rab18b8044.242
ENSOMEG00000023078rab5c5932.558ENSOMEG00000011161RAP2B9233.803
ENSOMEG00000023078rab5c10083.028ENSOMEG00000010692rab5aa10081.651
ENSOMEG00000023078rab5c9042.289ENSOMEG00000020350rab25b8346.707
ENSOMEG00000023078rab5c8142.614ENSOMEG00000020594zgc:1719277643.558
ENSOMEG00000023078rab5c7437.195ENSOMEG00000020418rab42a7537.195
ENSOMEG00000023078rab5c7537.349ENSOMEG00000006333RAB39B7737.805
ENSOMEG00000023078rab5c7435.503ENSOMEG00000009701RAB9A8335.503
ENSOMEG00000023078rab5c8042.045ENSOMEG00000018494-7242.045
ENSOMEG00000023078rab5c7633.735ENSOMEG00000011273kras9032.749
ENSOMEG00000023078rab5c6836.129ENSOMEG00000021726-6436.129
ENSOMEG00000023078rab5c9339.614ENSOMEG00000017263-9939.614
ENSOMEG00000023078rab5c7439.130ENSOMEG00000022002rab157639.130
ENSOMEG00000023078rab5c9634.884ENSOMEG00000008327rab9b9734.419
ENSOMEG00000023078rab5c7248.408ENSOMEG00000020271rab11al7348.408
ENSOMEG00000023078rab5c7737.791ENSOMEG00000008191rab127137.791
ENSOMEG00000023078rab5c7630.588ENSOMEG00000009463rhebl19230.588
ENSOMEG00000023078rab5c8741.799ENSOMEG00000009290-7643.293
ENSOMEG00000023078rab5c7832.787ENSOMEG00000000336RAB298234.132
ENSOMEG00000023078rab5c8242.222ENSOMEG00000020605rab18a8044.242
ENSOMEG00000023078rab5c5431.967ENSOMEG00000023857arl8bb6531.967
ENSOMEG00000023078rab5c7743.713ENSOMEG00000004379-8043.713
ENSOMEG00000023078rab5c9040.887ENSOMEG00000017467rab11a9440.887
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSOMEG00000023078rab5c10089.450ENSG00000108774RAB5C10095.604Homo_sapiens
ENSOMEG00000023078rab5c9995.853ENSAPOG00000016864rab5c9995.853Acanthochromis_polyacanthus
ENSOMEG00000023078rab5c10089.450ENSAMEG00000006003RAB5C10088.532Ailuropoda_melanoleuca
ENSOMEG00000023078rab5c9996.313ENSACIG00000010896rab5c9996.313Amphilophus_citrinellus
ENSOMEG00000023078rab5c9995.853ENSAOCG00000016614rab5c9995.853Amphiprion_ocellaris
ENSOMEG00000023078rab5c9795.755ENSAPEG00000017868-9795.755Amphiprion_percula
ENSOMEG00000023078rab5c10098.624ENSATEG00000001937rab5c10098.624Anabas_testudineus
ENSOMEG00000023078rab5c9491.707ENSANAG00000025390RAB5C10090.244Aotus_nancymaae
ENSOMEG00000023078rab5c9995.392ENSACLG00000002706rab5c9995.392Astatotilapia_calliptera
ENSOMEG00000023078rab5c9689.048ENSACLG00000008615-9987.727Astatotilapia_calliptera
ENSOMEG00000023078rab5c9590.865ENSAMXG00000037267-9990.431Astyanax_mexicanus
ENSOMEG00000023078rab5c9996.330ENSAMXG00000043717rab5c9996.330Astyanax_mexicanus
ENSOMEG00000023078rab5c10089.450ENSBTAG00000006982RAB5C10088.073Bos_taurus
ENSOMEG00000023078rab5c9974.194WBGene00004268rab-59974.194Caenorhabditis_elegans
ENSOMEG00000023078rab5c10089.450ENSCAFG00000015629RAB5C10088.532Canis_familiaris
ENSOMEG00000023078rab5c10089.450ENSCAFG00020013537RAB5C10088.532Canis_lupus_dingo
ENSOMEG00000023078rab5c10089.450ENSCHIG00000012960RAB5C10088.073Capra_hircus
ENSOMEG00000023078rab5c10089.908ENSTSYG00000030531RAB5C10088.532Carlito_syrichta
ENSOMEG00000023078rab5c10089.450ENSCCAG00000025940RAB5C10088.073Cebus_capucinus
ENSOMEG00000023078rab5c10089.450ENSCATG00000040873RAB5C10088.073Cercocebus_atys
ENSOMEG00000023078rab5c10088.991ENSCLAG00000016650RAB5C10087.615Chinchilla_lanigera
ENSOMEG00000023078rab5c8293.820ENSCHOG00000009886RAB5C10093.820Choloepus_hoffmanni
ENSOMEG00000023078rab5c10074.429ENSCING00000003340-9973.853Ciona_intestinalis
ENSOMEG00000023078rab5c10075.330ENSCSAVG00000000613-9983.951Ciona_savignyi
ENSOMEG00000023078rab5c10089.450ENSCGRG00001014226Rab5c10087.615Cricetulus_griseus_chok1gshd
ENSOMEG00000023078rab5c10089.450ENSCGRG00000007534Rab5c10087.615Cricetulus_griseus_crigri
ENSOMEG00000023078rab5c9994.931ENSCSEG00000017024rab5c9994.931Cynoglossus_semilaevis
ENSOMEG00000023078rab5c9996.313ENSCVAG00000009550rab5c9996.313Cyprinodon_variegatus
ENSOMEG00000023078rab5c10089.450ENSDNOG00000038853RAB5C10087.615Dasypus_novemcinctus
ENSOMEG00000023078rab5c10090.367ENSDORG00000006819Rab5c10088.991Dipodomys_ordii
ENSOMEG00000023078rab5c8580.541FBgn0014010Rab58480.541Drosophila_melanogaster
ENSOMEG00000023078rab5c8585.484ENSEBUG00000014794rab5c8885.484Eptatretus_burgeri
ENSOMEG00000023078rab5c10089.450ENSEASG00005009281RAB5C10088.532Equus_asinus_asinus
ENSOMEG00000023078rab5c10089.908ENSECAG00000025054RAB5C10088.532Equus_caballus
ENSOMEG00000023078rab5c10089.450ENSEEUG00000002790RAB5C10088.073Erinaceus_europaeus
ENSOMEG00000023078rab5c9993.981ENSELUG00000018516rab5c9993.981Esox_lucius
ENSOMEG00000023078rab5c9989.401ENSELUG00000010439-9989.401Esox_lucius
ENSOMEG00000023078rab5c10089.450ENSFCAG00000002148RAB5C10088.073Felis_catus
ENSOMEG00000023078rab5c10088.073ENSFDAG00000021541RAB5C10087.156Fukomys_damarensis
ENSOMEG00000023078rab5c9989.908ENSFHEG00000015268-9989.908Fundulus_heteroclitus
ENSOMEG00000023078rab5c9997.696ENSFHEG00000012117rab5c9997.696Fundulus_heteroclitus
ENSOMEG00000023078rab5c7787.500ENSGMOG00000001876-9787.500Gadus_morhua
ENSOMEG00000023078rab5c9995.853ENSGMOG00000015096rab5c9995.853Gadus_morhua
ENSOMEG00000023078rab5c9589.952ENSGAFG00000003642-9986.937Gambusia_affinis
ENSOMEG00000023078rab5c9996.774ENSGAFG00000000884rab5c9996.774Gambusia_affinis
ENSOMEG00000023078rab5c9991.705ENSGACG00000008659rab5c9991.705Gasterosteus_aculeatus
ENSOMEG00000023078rab5c10089.450ENSGGOG00000005472RAB5C10088.073Gorilla_gorilla
ENSOMEG00000023078rab5c9689.048ENSHBUG00000006823-9987.727Haplochromis_burtoni
ENSOMEG00000023078rab5c9995.392ENSHBUG00000002014rab5c9995.392Haplochromis_burtoni
ENSOMEG00000023078rab5c10088.073ENSHGLG00000012067RAB5C10086.697Heterocephalus_glaber_female
ENSOMEG00000023078rab5c9996.789ENSHCOG00000004662rab5c9796.789Hippocampus_comes
ENSOMEG00000023078rab5c9779.245ENSHCOG00000020238-10078.733Hippocampus_comes
ENSOMEG00000023078rab5c9295.000ENSIPUG00000020082rab5c9993.151Ictalurus_punctatus
ENSOMEG00000023078rab5c10088.991ENSSTOG00000006620RAB5C10088.073Ictidomys_tridecemlineatus
ENSOMEG00000023078rab5c10089.908ENSJJAG00000021181Rab5c10088.073Jaculus_jaculus
ENSOMEG00000023078rab5c9990.367ENSKMAG00000017417-9990.367Kryptolebias_marmoratus
ENSOMEG00000023078rab5c9998.618ENSKMAG00000020038rab5c9998.618Kryptolebias_marmoratus
ENSOMEG00000023078rab5c9996.774ENSLBEG00000004128rab5c9996.774Labrus_bergylta
ENSOMEG00000023078rab5c10089.954ENSLBEG00000010408-9890.783Labrus_bergylta
ENSOMEG00000023078rab5c9991.667ENSLOCG00000012566rab5c10090.741Lepisosteus_oculatus
ENSOMEG00000023078rab5c10089.450ENSMFAG00000039627RAB5C10088.073Macaca_fascicularis
ENSOMEG00000023078rab5c10089.450ENSMNEG00000000355RAB5C10088.073Macaca_nemestrina
ENSOMEG00000023078rab5c9990.826ENSMAMG00000016207-9990.826Mastacembelus_armatus
ENSOMEG00000023078rab5c9996.774ENSMAMG00000022322rab5c9996.774Mastacembelus_armatus
ENSOMEG00000023078rab5c9995.392ENSMZEG00005022735rab5c9995.392Maylandia_zebra
ENSOMEG00000023078rab5c9689.048ENSMZEG00005021090-9987.727Maylandia_zebra
ENSOMEG00000023078rab5c10089.908ENSMAUG00000015005Rab5c10088.532Mesocricetus_auratus
ENSOMEG00000023078rab5c10089.908ENSMICG00000041608RAB5C10088.532Microcebus_murinus
ENSOMEG00000023078rab5c10089.908ENSMOCG00000018531-10088.073Microtus_ochrogaster
ENSOMEG00000023078rab5c10095.872ENSMMOG00000020621rab5c9995.872Mola_mola
ENSOMEG00000023078rab5c9790.566ENSMALG00000006052rab5c9690.741Monopterus_albus
ENSOMEG00000023078rab5c9987.558ENSMALG00000022348-9987.558Monopterus_albus
ENSOMEG00000023078rab5c10089.908MGP_CAROLIEiJ_G0017184Rab5c10088.532Mus_caroli
ENSOMEG00000023078rab5c10089.908ENSMUSG00000019173Rab5c10088.532Mus_musculus
ENSOMEG00000023078rab5c10089.908MGP_PahariEiJ_G0018314Rab5c10088.532Mus_pahari
ENSOMEG00000023078rab5c10089.908MGP_SPRETEiJ_G0018027Rab5c10088.532Mus_spretus
ENSOMEG00000023078rab5c10089.450ENSMPUG00000010554RAB5C10088.532Mustela_putorius_furo
ENSOMEG00000023078rab5c10089.450ENSNGAG00000010286Rab5c10088.073Nannospalax_galili
ENSOMEG00000023078rab5c9996.313ENSNBRG00000018165rab5c9996.313Neolamprologus_brichardi
ENSOMEG00000023078rab5c9689.048ENSNBRG00000016922-9987.727Neolamprologus_brichardi
ENSOMEG00000023078rab5c8287.079ENSOPRG00000008255RAB5C10087.079Ochotona_princeps
ENSOMEG00000023078rab5c10088.532ENSODEG00000017920RAB5C10087.156Octodon_degus
ENSOMEG00000023078rab5c9995.853ENSONIG00000001113rab5c9995.853Oreochromis_niloticus
ENSOMEG00000023078rab5c100100.000ENSORLG00000003882rab5c100100.000Oryzias_latipes
ENSOMEG00000023078rab5c10099.541ENSORLG00020008388rab5c10099.541Oryzias_latipes_hni
ENSOMEG00000023078rab5c100100.000ENSORLG00015021900rab5c100100.000Oryzias_latipes_hsok
ENSOMEG00000023078rab5c10089.908ENSOGAG00000009456RAB5C10088.532Otolemur_garnettii
ENSOMEG00000023078rab5c10089.450ENSOARG00000018768RAB5C10088.073Ovis_aries
ENSOMEG00000023078rab5c10089.450ENSPPAG00000037206RAB5C10088.073Pan_paniscus
ENSOMEG00000023078rab5c10089.450ENSPPRG00000005745RAB5C10088.073Panthera_pardus
ENSOMEG00000023078rab5c10089.450ENSPTIG00000008177RAB5C10088.073Panthera_tigris_altaica
ENSOMEG00000023078rab5c10089.450ENSPTRG00000009194RAB5C10088.073Pan_troglodytes
ENSOMEG00000023078rab5c9988.426ENSPKIG00000020112-9988.426Paramormyrops_kingsleyae
ENSOMEG00000023078rab5c9987.963ENSPKIG00000001237-9986.574Paramormyrops_kingsleyae
ENSOMEG00000023078rab5c9992.627ENSPMGG00000010792rab5c9894.340Periophthalmus_magnuspinnatus
ENSOMEG00000023078rab5c10089.908ENSPEMG00000017971Rab5c10088.073Peromyscus_maniculatus_bairdii
ENSOMEG00000023078rab5c9975.576ENSPMAG00000001399rab5c9975.926Petromyzon_marinus
ENSOMEG00000023078rab5c9977.828ENSPMAG00000000008rab5c8885.417Petromyzon_marinus
ENSOMEG00000023078rab5c10073.853ENSPMAG00000007867rab5c8982.447Petromyzon_marinus
ENSOMEG00000023078rab5c10089.450ENSPCIG00000020225-10088.073Phascolarctos_cinereus
ENSOMEG00000023078rab5c9988.991ENSPLAG00000016333-10088.991Poecilia_latipinna
ENSOMEG00000023078rab5c9996.774ENSPLAG00000004790rab5c9996.774Poecilia_latipinna
ENSOMEG00000023078rab5c9790.141ENSPMEG00000012614-9988.235Poecilia_mexicana
ENSOMEG00000023078rab5c9996.774ENSPMEG00000011336rab5c9996.774Poecilia_mexicana
ENSOMEG00000023078rab5c9996.774ENSPREG00000010146rab5c9996.774Poecilia_reticulata
ENSOMEG00000023078rab5c8690.476ENSPREG00000022167-8991.803Poecilia_reticulata
ENSOMEG00000023078rab5c10089.450ENSPPYG00000008398RAB5C10088.073Pongo_abelii
ENSOMEG00000023078rab5c10088.532ENSPCAG00000016412RAB5C10087.156Procavia_capensis
ENSOMEG00000023078rab5c10088.991ENSPCOG00000026327RAB5C10088.073Propithecus_coquereli
ENSOMEG00000023078rab5c10089.908ENSPVAG00000003867RAB5C10088.532Pteropus_vampyrus
ENSOMEG00000023078rab5c9995.392ENSPNYG00000010615rab5c9995.392Pundamilia_nyererei
ENSOMEG00000023078rab5c9689.048ENSPNYG00000015851-9987.727Pundamilia_nyererei
ENSOMEG00000023078rab5c9688.571ENSPNAG00000002218-9988.152Pygocentrus_nattereri
ENSOMEG00000023078rab5c9995.413ENSPNAG00000028138rab5c9995.413Pygocentrus_nattereri
ENSOMEG00000023078rab5c10089.908ENSRNOG00000018568Rab5c10088.532Rattus_norvegicus
ENSOMEG00000023078rab5c10089.450ENSRBIG00000031376RAB5C10088.073Rhinopithecus_bieti
ENSOMEG00000023078rab5c10089.450ENSRROG00000032895RAB5C10088.073Rhinopithecus_roxellana
ENSOMEG00000023078rab5c10089.450ENSSBOG00000032552-10088.073Saimiri_boliviensis_boliviensis
ENSOMEG00000023078rab5c10089.908ENSSHAG00000005267-10088.532Sarcophilus_harrisii
ENSOMEG00000023078rab5c9987.037ENSSFOG00015009988-9887.037Scleropages_formosus
ENSOMEG00000023078rab5c9696.172ENSSMAG00000007323rab5c9994.931Scophthalmus_maximus
ENSOMEG00000023078rab5c9995.853ENSSDUG00000023008rab5c9995.853Seriola_dumerili
ENSOMEG00000023078rab5c9994.931ENSSLDG00000017771rab5c9994.931Seriola_lalandi_dorsalis
ENSOMEG00000023078rab5c10089.450ENSSPUG00000012950-10088.532Sphenodon_punctatus
ENSOMEG00000023078rab5c9997.235ENSSPAG00000006436rab5c9997.235Stegastes_partitus
ENSOMEG00000023078rab5c10089.450ENSSSCG00000032467RAB5C10088.073Sus_scrofa
ENSOMEG00000023078rab5c9995.392ENSTRUG00000015590rab5c9995.392Takifugu_rubripes
ENSOMEG00000023078rab5c9696.667ENSTNIG00000011711rab5c9596.667Tetraodon_nigroviridis
ENSOMEG00000023078rab5c10089.450ENSTBEG00000007092RAB5C10088.073Tupaia_belangeri
ENSOMEG00000023078rab5c10089.450ENSTTRG00000006673RAB5C10087.615Tursiops_truncatus
ENSOMEG00000023078rab5c10089.450ENSUAMG00000024343RAB5C10088.532Ursus_americanus
ENSOMEG00000023078rab5c10089.450ENSUMAG00000023270RAB5C10088.532Ursus_maritimus
ENSOMEG00000023078rab5c9996.774ENSXCOG00000016788rab5c9996.774Xiphophorus_couchianus
ENSOMEG00000023078rab5c9590.431ENSXCOG00000006300-9987.387Xiphophorus_couchianus
ENSOMEG00000023078rab5c9996.774ENSXMAG00000003266rab5c9996.774Xiphophorus_maculatus
ENSOMEG00000023078rab5c9988.940ENSXMAG00000022179-9988.940Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us