EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000023172 (Gene tree)
Gene ID: 112157670
Gene Symbol: rbm25b
Alias: -
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 8750 bases
Position: chrNVQA01000023.1:19081129-19089878
Accession: 112157670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000021262	RRM_1	PF00076.22	3.2e-09	1	1
ENSOMEP00000021275	RRM_1	PF00076.22	3.4e-09	1	1
ENSOMEP00000035749	RRM_1	PF00076.22	3.5e-09	1	1
ENSOMEP00000021262	PWI	PF01480.17	1.5e-13	1	1
ENSOMEP00000035749	PWI	PF01480.17	1.7e-13	1	1
ENSOMEP00000021275	PWI	PF01480.17	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000030897	-	2343	-	ENSOMEP00000021262	780 (aa)	-	-
ENSOMET00000030904	-	3407	-	ENSOMEP00000021275	789 (aa)	-	-
ENSOMET00000030926	-	3491	-	ENSOMEP00000035749	817 (aa)	XP_024146308	UPI000CF7D4E8

Gene Model

Click here to download ENSOMEG00000023172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000023172's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000023172	rbm25b	52	75.388	ENSOMEG00000022138	rbm25a	59	73.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000023172	rbm25b	55	77.851	ENSAPOG00000017757	rbm25a	58	75.210	Acanthochromis_polyacanthus
ENSOMEG00000023172	rbm25b	57	87.393	ENSAPOG00000015321	rbm25b	58	87.393	Acanthochromis_polyacanthus
ENSOMEG00000023172	rbm25b	56	77.124	ENSACIG00000019482	rbm25a	57	75.630	Amphilophus_citrinellus
ENSOMEG00000023172	rbm25b	57	84.402	ENSACIG00000014178	rbm25b	56	83.120	Amphilophus_citrinellus
ENSOMEG00000023172	rbm25b	55	75.330	ENSAOCG00000013695	rbm25a	56	73.418	Amphiprion_ocellaris
ENSOMEG00000023172	rbm25b	58	81.568	ENSAOCG00000019308	rbm25b	56	81.624	Amphiprion_ocellaris
ENSOMEG00000023172	rbm25b	58	84.664	ENSAPEG00000009666	rbm25b	60	86.325	Amphiprion_percula
ENSOMEG00000023172	rbm25b	55	77.174	ENSAPEG00000007514	rbm25a	58	74.792	Amphiprion_percula
ENSOMEG00000023172	rbm25b	57	76.596	ENSATEG00000020676	rbm25a	63	76.087	Anabas_testudineus
ENSOMEG00000023172	rbm25b	58	86.653	ENSATEG00000017312	rbm25b	57	86.752	Anabas_testudineus
ENSOMEG00000023172	rbm25b	57	88.889	ENSACLG00000024359	rbm25b	57	88.889	Astatotilapia_calliptera
ENSOMEG00000023172	rbm25b	100	56.961	ENSACLG00000027482	rbm25a	56	74.892	Astatotilapia_calliptera
ENSOMEG00000023172	rbm25b	71	43.357	WBGene00012245	W04D2.6	86	33.747	Caenorhabditis_elegans
ENSOMEG00000023172	rbm25b	52	79.310	ENSCAPG00000005239	RBM25	77	76.966	Cavia_aperea
ENSOMEG00000023172	rbm25b	65	81.081	ENSCHOG00000008903	RBM25	55	81.429	Choloepus_hoffmanni
ENSOMEG00000023172	rbm25b	50	84.892	ENSCGRG00001020817	Rbm25	84	70.601	Cricetulus_griseus_chok1gshd
ENSOMEG00000023172	rbm25b	100	81.527	ENSCSEG00000020737	rbm25b	58	84.764	Cynoglossus_semilaevis
ENSOMEG00000023172	rbm25b	56	72.747	ENSCSEG00000009430	rbm25a	60	71.869	Cynoglossus_semilaevis
ENSOMEG00000023172	rbm25b	100	81.740	ENSCVAG00000003478	rbm25b	57	83.439	Cyprinodon_variegatus
ENSOMEG00000023172	rbm25b	71	68.790	ENSCVAG00000005498	rbm25a	99	72.658	Cyprinodon_variegatus
ENSOMEG00000023172	rbm25b	64	74.144	ENSDARG00000006395	rbm25b	57	75.311	Danio_rerio
ENSOMEG00000023172	rbm25b	53	64.073	ENSDARG00000039266	rbm25a	99	94.937	Danio_rerio
ENSOMEG00000023172	rbm25b	89	72.072	FBgn0028474	CG4119	66	72.072	Drosophila_melanogaster
ENSOMEG00000023172	rbm25b	74	38.934	ENSEBUG00000002963	rbm25b	68	40.700	Eptatretus_burgeri
ENSOMEG00000023172	rbm25b	85	69.585	ENSEEUG00000007350	RBM25	78	72.350	Erinaceus_europaeus
ENSOMEG00000023172	rbm25b	58	75.926	ENSELUG00000007730	rbm25b	59	80.586	Esox_lucius
ENSOMEG00000023172	rbm25b	56	65.939	ENSELUG00000021847	rbm25a	52	64.978	Esox_lucius
ENSOMEG00000023172	rbm25b	52	72.381	ENSFHEG00000005318	rbm25a	89	71.371	Fundulus_heteroclitus
ENSOMEG00000023172	rbm25b	57	86.567	ENSFHEG00000003513	rbm25b	59	86.596	Fundulus_heteroclitus
ENSOMEG00000023172	rbm25b	83	71.429	ENSGMOG00000014070	rbm25a	82	77.202	Gadus_morhua
ENSOMEG00000023172	rbm25b	86	80.804	ENSGMOG00000014097	rbm25b	63	79.646	Gadus_morhua
ENSOMEG00000023172	rbm25b	97	86.173	ENSGAFG00000001092	rbm25b	52	86.071	Gambusia_affinis
ENSOMEG00000023172	rbm25b	99	71.154	ENSGAFG00000018036	rbm25a	54	69.080	Gambusia_affinis
ENSOMEG00000023172	rbm25b	57	88.462	ENSHBUG00000018499	rbm25b	57	88.462	Haplochromis_burtoni
ENSOMEG00000023172	rbm25b	55	77.533	ENSHBUG00000016908	rbm25a	58	74.895	Haplochromis_burtoni
ENSOMEG00000023172	rbm25b	99	79.748	ENSHCOG00000000142	rbm25b	57	79.295	Hippocampus_comes
ENSOMEG00000023172	rbm25b	56	87.746	ENSKMAG00000018826	rbm25b	57	87.393	Kryptolebias_marmoratus
ENSOMEG00000023172	rbm25b	58	69.200	ENSKMAG00000016242	rbm25a	61	74.643	Kryptolebias_marmoratus
ENSOMEG00000023172	rbm25b	99	85.122	ENSLBEG00000010667	rbm25b	57	86.994	Labrus_bergylta
ENSOMEG00000023172	rbm25b	58	69.647	ENSLACG00000011845	RBM25	54	71.610	Latimeria_chalumnae
ENSOMEG00000023172	rbm25b	57	69.958	ENSLOCG00000014196	rbm25b	55	73.222	Lepisosteus_oculatus
ENSOMEG00000023172	rbm25b	53	74.074	ENSMAMG00000000165	rbm25a	61	67.068	Mastacembelus_armatus
ENSOMEG00000023172	rbm25b	58	87.261	ENSMAMG00000004524	rbm25b	57	87.580	Mastacembelus_armatus
ENSOMEG00000023172	rbm25b	57	88.889	ENSMZEG00005001453	rbm25b	57	88.889	Maylandia_zebra
ENSOMEG00000023172	rbm25b	55	77.533	ENSMZEG00005011183	rbm25a	58	74.895	Maylandia_zebra
ENSOMEG00000023172	rbm25b	99	88.403	ENSMMOG00000015545	rbm25b	63	87.742	Mola_mola
ENSOMEG00000023172	rbm25b	57	73.774	ENSMMOG00000009065	rbm25a	57	72.785	Mola_mola
ENSOMEG00000023172	rbm25b	58	86.458	ENSMALG00000020441	rbm25b	90	86.864	Monopterus_albus
ENSOMEG00000023172	rbm25b	50	76.962	ENSMALG00000020459	rbm25a	90	76.962	Monopterus_albus
ENSOMEG00000023172	rbm25b	57	80.769	ENSNBRG00000022192	rbm25b	56	79.060	Neolamprologus_brichardi
ENSOMEG00000023172	rbm25b	55	77.753	ENSNBRG00000003761	rbm25a	58	74.686	Neolamprologus_brichardi
ENSOMEG00000023172	rbm25b	54	80.000	ENSOPRG00000016744	-	51	80.000	Ochotona_princeps
ENSOMEG00000023172	rbm25b	50	73.604	ENSORLG00000009958	rbm25a	99	73.469	Oryzias_latipes
ENSOMEG00000023172	rbm25b	73	68.622	ENSORLG00015022499	rbm25a	54	65.544	Oryzias_latipes_hsok
ENSOMEG00000023172	rbm25b	58	75.681	ENSPKIG00000003203	rbm25b	57	75.472	Paramormyrops_kingsleyae
ENSOMEG00000023172	rbm25b	52	63.636	ENSPMGG00000001791	rbm25a	99	63.492	Periophthalmus_magnuspinnatus
ENSOMEG00000023172	rbm25b	58	83.090	ENSPMGG00000015740	rbm25b	58	83.721	Periophthalmus_magnuspinnatus
ENSOMEG00000023172	rbm25b	100	65.045	ENSPFOG00000017931	rbm25a	89	69.880	Poecilia_formosa
ENSOMEG00000023172	rbm25b	57	85.325	ENSPFOG00000018808	rbm25b	58	85.625	Poecilia_formosa
ENSOMEG00000023172	rbm25b	99	72.804	ENSPLAG00000018338	rbm25a	89	69.880	Poecilia_latipinna
ENSOMEG00000023172	rbm25b	99	72.804	ENSPMEG00000024470	rbm25a	88	74.634	Poecilia_mexicana
ENSOMEG00000023172	rbm25b	57	85.115	ENSPMEG00000019161	rbm25b	58	85.417	Poecilia_mexicana
ENSOMEG00000023172	rbm25b	50	86.398	ENSPMEG00000012262	rbm25b	99	86.835	Poecilia_mexicana
ENSOMEG00000023172	rbm25b	100	68.758	ENSPREG00000009228	rbm25a	89	69.880	Poecilia_reticulata
ENSOMEG00000023172	rbm25b	57	85.177	ENSPREG00000008522	rbm25b	58	85.477	Poecilia_reticulata
ENSOMEG00000023172	rbm25b	51	64.854	ENSPCAG00000006226	RBM25	76	71.030	Procavia_capensis
ENSOMEG00000023172	rbm25b	57	81.197	ENSPNYG00000023303	rbm25b	56	79.487	Pundamilia_nyererei
ENSOMEG00000023172	rbm25b	58	73.608	ENSPNYG00000022596	rbm25a	54	74.892	Pundamilia_nyererei
ENSOMEG00000023172	rbm25b	58	75.574	ENSPNAG00000012024	rbm25b	57	77.660	Pygocentrus_nattereri
ENSOMEG00000023172	rbm25b	64	78.423	ENSSBOG00000034153	RBM25	51	58.087	Saimiri_boliviensis_boliviensis
ENSOMEG00000023172	rbm25b	57	74.947	ENSSFOG00015007093	rbm25	58	74.526	Scleropages_formosus
ENSOMEG00000023172	rbm25b	57	76.744	ENSSMAG00000009745	rbm25a	58	74.633	Scophthalmus_maximus
ENSOMEG00000023172	rbm25b	58	83.750	ENSSMAG00000002520	rbm25b	58	84.958	Scophthalmus_maximus
ENSOMEG00000023172	rbm25b	55	78.289	ENSSDUG00000017984	rbm25a	59	75.579	Seriola_dumerili
ENSOMEG00000023172	rbm25b	55	78.289	ENSSLDG00000010342	rbm25a	58	75.579	Seriola_lalandi_dorsalis
ENSOMEG00000023172	rbm25b	56	88.621	ENSSLDG00000024573	rbm25b	99	88.621	Seriola_lalandi_dorsalis
ENSOMEG00000023172	rbm25b	99	82.382	ENSSPAG00000016168	rbm25b	57	86.170	Stegastes_partitus
ENSOMEG00000023172	rbm25b	55	76.282	ENSSPAG00000011114	rbm25a	58	73.975	Stegastes_partitus
ENSOMEG00000023172	rbm25b	57	73.950	ENSTRUG00000003076	rbm25a	59	74.255	Takifugu_rubripes
ENSOMEG00000023172	rbm25b	90	86.434	ENSTRUG00000017964	rbm25b	58	86.966	Takifugu_rubripes
ENSOMEG00000023172	rbm25b	50	74.177	ENSTNIG00000004673	rbm25a	100	73.924	Tetraodon_nigroviridis
ENSOMEG00000023172	rbm25b	60	76.585	ENSTBEG00000010538	-	55	77.295	Tupaia_belangeri
ENSOMEG00000023172	rbm25b	50	63.291	ENSVPAG00000009052	RBM25	76	70.815	Vicugna_pacos
ENSOMEG00000023172	rbm25b	58	59.717	ENSXETG00000021857	rbm25	56	73.077	Xenopus_tropicalis
ENSOMEG00000023172	rbm25b	99	71.326	ENSXCOG00000004043	RBM25	57	71.608	Xiphophorus_couchianus
ENSOMEG00000023172	rbm25b	99	85.783	ENSXMAG00000017290	rbm25b	58	85.093	Xiphophorus_maculatus
ENSOMEG00000023172	rbm25b	99	68.284	ENSXMAG00000009077	RBM25	60	69.472	Xiphophorus_maculatus