EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000023475 (Gene tree)
Gene ID: 112145348
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A0-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 1810 bases
Position: chrNVQA01000009.1:29937801-29939610
Accession: 112145348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000035941	RRM_1	PF00076.22	5.5e-44	1	3
ENSOMEP00000035941	RRM_1	PF00076.22	5.5e-44	2	3
ENSOMEP00000035941	RRM_1	PF00076.22	5.5e-44	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000031268	-	1810	XM_024270515	ENSOMEP00000035941	476 (aa)	XP_024126283	UPI000CF7C41E

Gene Model

Click here to download ENSOMEG00000023475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000023475's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000023475	-	54	41.558	ENSOMEG00000005936	hnrnpaba	69	41.463
ENSOMEG00000023475	-	81	92.308	ENSOMEG00000009566	-	87	92.308
ENSOMEG00000023475	-	60	49.425	ENSOMEG00000004838	hnrnpa3	84	41.132
ENSOMEG00000023475	-	68	49.727	ENSOMEG00000015959	-	84	44.231
ENSOMEG00000023475	-	65	65.625	ENSOMEG00000002091	-	90	60.645
ENSOMEG00000023475	-	72	39.773	ENSOMEG00000003120	dazap1	64	39.773
ENSOMEG00000023475	-	85	89.202	ENSOMEG00000006327	-	95	89.202
ENSOMEG00000023475	-	70	36.111	ENSOMEG00000017536	MSI1	66	35.593
ENSOMEG00000023475	-	75	37.430	ENSOMEG00000002272	-	55	37.288
ENSOMEG00000023475	-	83	36.364	ENSOMEG00000000146	msi2a	94	35.000
ENSOMEG00000023475	-	99	74.364	ENSOMEG00000002000	-	99	74.576
ENSOMEG00000023475	-	79	75.676	ENSOMEG00000002084	-	71	75.676
ENSOMEG00000023475	-	95	89.427	ENSOMEG00000021030	-	100	89.427
ENSOMEG00000023475	-	100	92.857	ENSOMEG00000012368	-	100	92.857
ENSOMEG00000023475	-	59	44.000	ENSOMEG00000018558	hnrnpd	80	44.000
ENSOMEG00000023475	-	69	67.857	ENSOMEG00000011670	-	96	67.857
ENSOMEG00000023475	-	100	89.189	ENSOMEG00000006903	-	100	89.189
ENSOMEG00000023475	-	86	70.183	ENSOMEG00000013637	-	100	70.833
ENSOMEG00000023475	-	54	44.156	ENSOMEG00000023772	hnrnpabb	77	44.156
ENSOMEG00000023475	-	96	92.576	ENSOMEG00000002509	-	99	92.576
ENSOMEG00000023475	-	56	36.082	ENSOMEG00000021469	cirbpa	84	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000023475	-	69	66.258	ENSAOCG00000015951	-	96	66.258	Amphiprion_ocellaris
ENSOMEG00000023475	-	71	57.222	ENSAOCG00000015914	-	73	56.684	Amphiprion_ocellaris
ENSOMEG00000023475	-	69	66.258	ENSAPEG00000002274	-	96	66.258	Amphiprion_percula
ENSOMEG00000023475	-	67	57.222	ENSAPEG00000002224	-	85	56.684	Amphiprion_percula
ENSOMEG00000023475	-	67	57.778	ENSACLG00000008978	-	95	57.065	Astatotilapia_calliptera
ENSOMEG00000023475	-	72	57.778	ENSCVAG00000008324	-	99	57.219	Cyprinodon_variegatus
ENSOMEG00000023475	-	73	44.571	FBgn0001215	Hrb98DE	92	41.589	Drosophila_melanogaster
ENSOMEG00000023475	-	64	44.253	FBgn0004237	Hrb87F	74	43.716	Drosophila_melanogaster
ENSOMEG00000023475	-	60	36.471	ENSEBUG00000010003	-	87	36.471	Eptatretus_burgeri
ENSOMEG00000023475	-	68	59.036	ENSELUG00000014407	-	98	59.036	Esox_lucius
ENSOMEG00000023475	-	67	57.778	ENSHBUG00000023867	-	95	57.065	Haplochromis_burtoni
ENSOMEG00000023475	-	69	55.556	ENSHCOG00000007180	-	100	50.655	Hippocampus_comes
ENSOMEG00000023475	-	80	54.167	ENSLBEG00000006362	-	79	54.167	Labrus_bergylta
ENSOMEG00000023475	-	64	55.645	ENSLOCG00000012121	-	66	55.645	Lepisosteus_oculatus
ENSOMEG00000023475	-	67	55.357	ENSMAMG00000017728	-	79	54.545	Mastacembelus_armatus
ENSOMEG00000023475	-	67	57.778	ENSMZEG00005001063	-	82	57.143	Maylandia_zebra
ENSOMEG00000023475	-	68	61.818	ENSMMOG00000004242	-	98	61.818	Mola_mola
ENSOMEG00000023475	-	60	40.230	ENSMEUG00000003051	-	88	36.719	Notamacropus_eugenii
ENSOMEG00000023475	-	76	56.115	ENSORLG00000030284	-	71	56.115	Oryzias_latipes
ENSOMEG00000023475	-	85	62.944	ENSORLG00000023542	-	96	55.378	Oryzias_latipes
ENSOMEG00000023475	-	87	61.244	ENSORLG00000023176	-	99	54.167	Oryzias_latipes
ENSOMEG00000023475	-	95	62.887	ENSORLG00020006029	-	95	53.696	Oryzias_latipes_hni
ENSOMEG00000023475	-	80	55.682	ENSORLG00020007171	-	98	55.682	Oryzias_latipes_hni
ENSOMEG00000023475	-	73	64.242	ENSORLG00020007084	-	82	64.242	Oryzias_latipes_hni
ENSOMEG00000023475	-	72	57.778	ENSPREG00000010603	-	70	57.219	Poecilia_reticulata
ENSOMEG00000023475	-	67	57.778	ENSPNYG00000020763	-	95	57.065	Pundamilia_nyererei
ENSOMEG00000023475	-	54	57.500	ENSPNAG00000018051	-	79	57.500	Pygocentrus_nattereri
ENSOMEG00000023475	-	64	54.913	ENSSHAG00000015609	-	100	49.533	Sarcophilus_harrisii
ENSOMEG00000023475	-	80	54.167	ENSSDUG00000002394	-	94	54.167	Seriola_dumerili
ENSOMEG00000023475	-	66	68.000	ENSSLDG00000024685	-	85	68.000	Seriola_lalandi_dorsalis