EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000023545 (Gene tree)
Gene ID: 112152657
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 12736 bases
Position: chrNVQA01000016.1:15861731-15874466
Accession: 112152657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000036003	HRDC	PF00570.23	1.7e-13	1	1
ENSOMEP00000036003	BDHCT	PF08072.11	2e-19	1	1
ENSOMEP00000036003	DEAD	PF00270.29	2.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000031350	-	4601	XM_024282364	ENSOMEP00000036003	1368 (aa)	XP_024138132	UPI000CF7DA9B

Gene Model

Click here to download ENSOMEG00000023545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000023545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000023545	blm	64	66.028	ENSG00000197299	BLM	63	73.770	Homo_sapiens
ENSOMEG00000023545	blm	100	72.106	ENSAPOG00000017966	blm	100	72.832	Acanthochromis_polyacanthus
ENSOMEG00000023545	blm	100	70.975	ENSACIG00000023762	blm	100	70.904	Amphilophus_citrinellus
ENSOMEG00000023545	blm	100	71.603	ENSAOCG00000003318	blm	100	72.525	Amphiprion_ocellaris
ENSOMEG00000023545	blm	100	69.951	ENSAPEG00000018105	blm	100	70.857	Amphiprion_percula
ENSOMEG00000023545	blm	99	72.461	ENSATEG00000006421	blm	100	72.461	Anabas_testudineus
ENSOMEG00000023545	blm	82	51.570	ENSAPLG00000006878	BLM	99	51.410	Anas_platyrhynchos
ENSOMEG00000023545	blm	57	66.497	ENSACAG00000014275	BLM	55	66.156	Anolis_carolinensis
ENSOMEG00000023545	blm	63	65.773	ENSANAG00000038415	BLM	69	73.156	Aotus_nancymaae
ENSOMEG00000023545	blm	100	71.429	ENSACLG00000020354	blm	100	71.418	Astatotilapia_calliptera
ENSOMEG00000023545	blm	99	56.174	ENSAMXG00000016970	blm	99	56.889	Astyanax_mexicanus
ENSOMEG00000023545	blm	57	65.813	ENSCJAG00000009803	BLM	63	73.361	Callithrix_jacchus
ENSOMEG00000023545	blm	66	64.803	ENSCAFG00000012385	BLM	66	64.923	Canis_familiaris
ENSOMEG00000023545	blm	57	64.803	ENSCAFG00020016111	BLM	88	66.712	Canis_lupus_dingo
ENSOMEG00000023545	blm	62	72.749	ENSCHIG00000010329	BLM	55	72.749	Capra_hircus
ENSOMEG00000023545	blm	57	65.522	ENSTSYG00000012368	BLM	51	72.336	Carlito_syrichta
ENSOMEG00000023545	blm	61	70.318	ENSCAPG00000017976	BLM	69	70.318	Cavia_aperea
ENSOMEG00000023545	blm	68	62.681	ENSCPOG00000001761	BLM	68	62.757	Cavia_porcellus
ENSOMEG00000023545	blm	57	65.645	ENSCCAG00000023069	BLM	62	73.361	Cebus_capucinus
ENSOMEG00000023545	blm	57	65.693	ENSCLAG00000012111	BLM	55	65.434	Chinchilla_lanigera
ENSOMEG00000023545	blm	57	65.645	ENSCSAG00000017040	BLM	55	65.773	Chlorocebus_sabaeus
ENSOMEG00000023545	blm	60	59.722	ENSCHOG00000006255	BLM	61	59.722	Choloepus_hoffmanni
ENSOMEG00000023545	blm	76	55.566	ENSCPBG00000025000	BLM	94	55.085	Chrysemys_picta_bellii
ENSOMEG00000023545	blm	53	51.433	ENSCANG00000034808	BLM	59	51.433	Colobus_angolensis_palliatus
ENSOMEG00000023545	blm	87	63.265	ENSCGRG00001024897	Blm	69	62.813	Cricetulus_griseus_chok1gshd
ENSOMEG00000023545	blm	95	64.494	ENSCSEG00000013483	blm	99	65.243	Cynoglossus_semilaevis
ENSOMEG00000023545	blm	76	73.820	ENSCVAG00000017583	blm	97	73.820	Cyprinodon_variegatus
ENSOMEG00000023545	blm	99	58.897	ENSDARG00000077089	blm	100	59.386	Danio_rerio
ENSOMEG00000023545	blm	68	64.286	ENSDNOG00000010159	BLM	66	64.413	Dasypus_novemcinctus
ENSOMEG00000023545	blm	59	62.932	ENSDORG00000011033	Blm	80	63.057	Dipodomys_ordii
ENSOMEG00000023545	blm	56	41.184	FBgn0002906	Blm	52	41.236	Drosophila_melanogaster
ENSOMEG00000023545	blm	52	54.348	ENSETEG00000015019	BLM	50	54.348	Echinops_telfairi
ENSOMEG00000023545	blm	80	49.914	ENSEASG00005006727	BLM	81	49.076	Equus_asinus_asinus
ENSOMEG00000023545	blm	67	59.832	ENSECAG00000011405	BLM	68	59.807	Equus_caballus
ENSOMEG00000023545	blm	75	63.706	ENSEEUG00000001434	BLM	60	63.567	Erinaceus_europaeus
ENSOMEG00000023545	blm	99	58.384	ENSELUG00000019098	blm	99	58.114	Esox_lucius
ENSOMEG00000023545	blm	77	73.361	ENSFCAG00000006087	BLM	50	73.361	Felis_catus
ENSOMEG00000023545	blm	75	54.452	ENSFALG00000010981	BLM	67	62.740	Ficedula_albicollis
ENSOMEG00000023545	blm	53	66.822	ENSFDAG00000012658	BLM	55	66.822	Fukomys_damarensis
ENSOMEG00000023545	blm	100	72.426	ENSFHEG00000002553	blm	100	72.590	Fundulus_heteroclitus
ENSOMEG00000023545	blm	99	59.185	ENSGMOG00000016431	blm	99	68.433	Gadus_morhua
ENSOMEG00000023545	blm	80	52.044	ENSGALG00000008256	BLM	83	51.448	Gallus_gallus
ENSOMEG00000023545	blm	96	81.081	ENSGAFG00000001117	blm	99	81.081	Gambusia_affinis
ENSOMEG00000023545	blm	99	66.175	ENSGACG00000010863	blm	100	89.015	Gasterosteus_aculeatus
ENSOMEG00000023545	blm	61	64.823	ENSGAGG00000005383	BLM	72	67.270	Gopherus_agassizii
ENSOMEG00000023545	blm	61	66.028	ENSGGOG00000007710	BLM	75	76.066	Gorilla_gorilla
ENSOMEG00000023545	blm	100	73.055	ENSHBUG00000015943	blm	100	73.041	Haplochromis_burtoni
ENSOMEG00000023545	blm	66	63.471	ENSHGLG00000013231	BLM	67	63.273	Heterocephalus_glaber_female
ENSOMEG00000023545	blm	75	69.866	ENSHCOG00000011455	blm	100	69.942	Hippocampus_comes
ENSOMEG00000023545	blm	75	64.689	ENSIPUG00000000529	blm	80	72.598	Ictalurus_punctatus
ENSOMEG00000023545	blm	57	65.051	ENSSTOG00000005000	BLM	55	64.758	Ictidomys_tridecemlineatus
ENSOMEG00000023545	blm	51	71.294	ENSJJAG00000016322	Blm	73	71.294	Jaculus_jaculus
ENSOMEG00000023545	blm	100	74.029	ENSKMAG00000016608	blm	100	74.604	Kryptolebias_marmoratus
ENSOMEG00000023545	blm	60	79.087	ENSLBEG00000018729	blm	97	79.087	Labrus_bergylta
ENSOMEG00000023545	blm	60	65.371	ENSLACG00000006490	BLM	78	53.820	Latimeria_chalumnae
ENSOMEG00000023545	blm	99	51.918	ENSLOCG00000014302	blm	100	52.617	Lepisosteus_oculatus
ENSOMEG00000023545	blm	64	62.148	ENSMLEG00000032934	BLM	66	62.148	Mandrillus_leucophaeus
ENSOMEG00000023545	blm	99	71.780	ENSMAMG00000008726	blm	99	71.719	Mastacembelus_armatus
ENSOMEG00000023545	blm	100	70.402	ENSMZEG00005022323	blm	100	70.613	Maylandia_zebra
ENSOMEG00000023545	blm	87	62.785	ENSMAUG00000008953	Blm	70	62.396	Mesocricetus_auratus
ENSOMEG00000023545	blm	65	66.031	ENSMICG00000034442	BLM	60	72.951	Microcebus_murinus
ENSOMEG00000023545	blm	100	70.129	ENSMMOG00000006959	blm	100	70.179	Mola_mola
ENSOMEG00000023545	blm	100	71.418	ENSMALG00000007323	blm	100	71.632	Monopterus_albus
ENSOMEG00000023545	blm	60	61.922	MGP_CAROLIEiJ_G0029907	Blm	70	61.730	Mus_caroli
ENSOMEG00000023545	blm	69	62.919	ENSMUSG00000030528	Blm	69	62.470	Mus_musculus
ENSOMEG00000023545	blm	68	62.336	MGP_PahariEiJ_G0013129	Blm	68	62.336	Mus_pahari
ENSOMEG00000023545	blm	87	62.963	MGP_SPRETEiJ_G0031009	Blm	69	62.726	Mus_spretus
ENSOMEG00000023545	blm	87	62.724	ENSNGAG00000001275	Blm	88	62.336	Nannospalax_galili
ENSOMEG00000023545	blm	100	70.945	ENSNBRG00000019702	blm	100	71.136	Neolamprologus_brichardi
ENSOMEG00000023545	blm	60	63.520	ENSNLEG00000012087	BLM	74	61.959	Nomascus_leucogenys
ENSOMEG00000023545	blm	63	62.566	ENSMEUG00000007253	BLM	54	62.302	Notamacropus_eugenii
ENSOMEG00000023545	blm	80	64.463	ENSOPRG00000011667	BLM	62	64.463	Ochotona_princeps
ENSOMEG00000023545	blm	57	60.433	ENSODEG00000015373	BLM	75	60.026	Octodon_degus
ENSOMEG00000023545	blm	100	67.950	ENSONIG00000015193	blm	100	68.182	Oreochromis_niloticus
ENSOMEG00000023545	blm	56	65.429	ENSOANG00000009316	-	100	65.424	Ornithorhynchus_anatinus
ENSOMEG00000023545	blm	87	62.380	ENSOCUG00000013969	BLM	79	51.945	Oryctolagus_cuniculus
ENSOMEG00000023545	blm	100	90.240	ENSORLG00000008110	blm	100	90.240	Oryzias_latipes
ENSOMEG00000023545	blm	100	89.731	ENSORLG00020004812	blm	100	89.731	Oryzias_latipes_hni
ENSOMEG00000023545	blm	100	90.095	ENSORLG00015018640	blm	100	90.095	Oryzias_latipes_hsok
ENSOMEG00000023545	blm	68	64.051	ENSOGAG00000005708	BLM	67	63.636	Otolemur_garnettii
ENSOMEG00000023545	blm	61	65.773	ENSPPAG00000032173	BLM	50	73.566	Pan_paniscus
ENSOMEG00000023545	blm	57	73.156	ENSPPRG00000002471	BLM	50	73.156	Panthera_pardus
ENSOMEG00000023545	blm	64	64.676	ENSPTIG00000016168	BLM	50	72.505	Panthera_tigris_altaica
ENSOMEG00000023545	blm	60	65.985	ENSPTRG00000007460	BLM	50	73.306	Pan_troglodytes
ENSOMEG00000023545	blm	89	73.609	ENSPKIG00000008954	blm	99	54.264	Paramormyrops_kingsleyae
ENSOMEG00000023545	blm	71	68.426	ENSPMGG00000006629	blm	100	69.036	Periophthalmus_magnuspinnatus
ENSOMEG00000023545	blm	88	62.545	ENSPEMG00000017348	Blm	72	62.545	Peromyscus_maniculatus_bairdii
ENSOMEG00000023545	blm	100	72.026	ENSPFOG00000005059	blm	100	72.026	Poecilia_formosa
ENSOMEG00000023545	blm	100	72.026	ENSPLAG00000017344	blm	100	72.026	Poecilia_latipinna
ENSOMEG00000023545	blm	100	72.026	ENSPMEG00000000321	blm	100	72.026	Poecilia_mexicana
ENSOMEG00000023545	blm	100	71.315	ENSPREG00000007715	blm	100	71.460	Poecilia_reticulata
ENSOMEG00000023545	blm	64	64.623	ENSPPYG00000006784	BLM	55	64.758	Pongo_abelii
ENSOMEG00000023545	blm	59	60.744	ENSPCAG00000008960	BLM	59	60.624	Procavia_capensis
ENSOMEG00000023545	blm	65	57.634	ENSPCOG00000000439	BLM	53	57.088	Propithecus_coquereli
ENSOMEG00000023545	blm	72	75.738	ENSPVAG00000011642	BLM	59	75.738	Pteropus_vampyrus
ENSOMEG00000023545	blm	100	64.346	ENSPNYG00000010956	blm	100	64.135	Pundamilia_nyererei
ENSOMEG00000023545	blm	100	59.524	ENSPNAG00000011714	blm	100	58.547	Pygocentrus_nattereri
ENSOMEG00000023545	blm	88	62.278	ENSRNOG00000011213	Blm	88	62.262	Rattus_norvegicus
ENSOMEG00000023545	blm	88	62.706	ENSSHAG00000007988	BLM	87	62.617	Sarcophilus_harrisii
ENSOMEG00000023545	blm	68	73.616	ENSSFOG00015015462	blm	76	73.294	Scleropages_formosus
ENSOMEG00000023545	blm	100	71.173	ENSSMAG00000001120	blm	100	71.459	Scophthalmus_maximus
ENSOMEG00000023545	blm	100	72.163	ENSSDUG00000010955	blm	100	72.163	Seriola_dumerili
ENSOMEG00000023545	blm	100	72.357	ENSSLDG00000000634	blm	100	72.357	Seriola_lalandi_dorsalis
ENSOMEG00000023545	blm	59	58.072	ENSSARG00000006398	BLM	62	58.173	Sorex_araneus
ENSOMEG00000023545	blm	65	59.977	ENSSPUG00000000013	BLM	97	51.806	Sphenodon_punctatus
ENSOMEG00000023545	blm	99	72.113	ENSSPAG00000013999	blm	99	72.324	Stegastes_partitus
ENSOMEG00000023545	blm	66	65.903	ENSSSCG00000001816	BLM	61	68.811	Sus_scrofa
ENSOMEG00000023545	blm	80	46.487	ENSTGUG00000009959	-	99	46.301	Taeniopygia_guttata
ENSOMEG00000023545	blm	99	66.786	ENSTRUG00000019860	blm	99	67.505	Takifugu_rubripes
ENSOMEG00000023545	blm	99	63.489	ENSTNIG00000019246	blm	99	63.354	Tetraodon_nigroviridis
ENSOMEG00000023545	blm	65	66.031	ENSTTRG00000016386	BLM	64	65.773	Tursiops_truncatus
ENSOMEG00000023545	blm	59	73.156	ENSUMAG00000009105	BLM	95	67.545	Ursus_maritimus
ENSOMEG00000023545	blm	68	62.532	ENSVPAG00000000085	BLM	66	62.295	Vicugna_pacos
ENSOMEG00000023545	blm	63	63.984	ENSVVUG00000006402	BLM	64	64.110	Vulpes_vulpes
ENSOMEG00000023545	blm	93	61.173	ENSXETG00000007847	blm	83	66.497	Xenopus_tropicalis
ENSOMEG00000023545	blm	100	68.011	ENSXCOG00000020227	blm	100	68.082	Xiphophorus_couchianus
ENSOMEG00000023545	blm	100	71.986	ENSXMAG00000002951	blm	100	71.387	Xiphophorus_maculatus