EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000023784 (Gene tree)
Gene ID: 112146600
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 9468 bases
Position: chrNVQA01000010.1:16408203-16417670
Accession: 112146600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000036261	MMR_HSR1	PF01926.23	4.7e-05	1	1
ENSOMEP00000036260	MMR_HSR1	PF01926.23	4.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000031620	-	2802	-	ENSOMEP00000036261	180 (aa)	XP_024128267	UPI0000EA0D81
ENSOMET00000031619	-	552	-	ENSOMEP00000036260	183 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000023784's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000023784's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000023784	-	82	66.892	ENSOMEG00000022678	-	91	66.892
ENSOMEG00000023784	-	63	30.081	ENSOMEG00000009074	-	58	30.081
ENSOMEG00000023784	-	96	32.184	ENSOMEG00000023857	arl8bb	94	32.184
ENSOMEG00000023784	-	94	34.615	ENSOMEG00000001352	arfrp1	89	34.615
ENSOMEG00000023784	-	100	92.818	ENSOMEG00000017070	-	100	92.818
ENSOMEG00000023784	-	97	81.034	ENSOMEG00000000211	-	62	81.034
ENSOMEG00000023784	-	100	93.923	ENSOMEG00000002559	arf2b	100	93.923
ENSOMEG00000023784	-	100	42.935	ENSOMEG00000017204	ARL6	99	42.935
ENSOMEG00000023784	-	92	46.667	ENSOMEG00000007691	arl3	97	46.386
ENSOMEG00000023784	-	99	45.745	ENSOMEG00000003868	arl4aa	95	45.745
ENSOMEG00000023784	-	91	45.181	ENSOMEG00000003861	-	91	45.181
ENSOMEG00000023784	-	63	30.081	ENSOMEG00000006036	rab1ab	58	30.081
ENSOMEG00000023784	-	91	41.618	ENSOMEG00000004308	arl4d	85	41.618
ENSOMEG00000023784	-	75	38.129	ENSOMEG00000023727	ARL10	54	38.129
ENSOMEG00000023784	-	93	45.509	ENSOMEG00000005057	arl3l2	90	45.238
ENSOMEG00000023784	-	97	50.575	ENSOMEG00000017228	arl5a	97	50.575
ENSOMEG00000023784	-	96	31.609	ENSOMEG00000001959	arl8ba	94	31.609
ENSOMEG00000023784	-	96	59.302	ENSOMEG00000023497	arl1	92	59.302
ENSOMEG00000023784	-	93	41.279	ENSOMEG00000016904	arl14	91	41.279
ENSOMEG00000023784	-	96	50.000	ENSOMEG00000003634	arl8	96	50.000
ENSOMEG00000023784	-	97	83.333	ENSOMEG00000020821	ARF5	97	83.333
ENSOMEG00000023784	-	96	47.191	ENSOMEG00000007253	arl4cb	91	47.191
ENSOMEG00000023784	-	91	47.561	ENSOMEG00000008521	arl2	89	47.561
ENSOMEG00000023784	-	100	92.818	ENSOMEG00000009575	arf3b	100	92.818
ENSOMEG00000023784	-	92	31.765	ENSOMEG00000010187	arl13b	68	32.143
ENSOMEG00000023784	-	84	45.395	ENSOMEG00000007419	arl11	83	45.695
ENSOMEG00000023784	-	99	92.179	ENSOMEG00000007598	-	100	91.667
ENSOMEG00000023784	-	88	42.945	ENSOMEG00000023152	-	85	41.916
ENSOMEG00000023784	-	93	46.707	ENSOMEG00000021718	arl5c	94	46.707
ENSOMEG00000023784	-	97	30.319	ENSOMEG00000012020	-	94	30.319
ENSOMEG00000023784	-	79	33.333	ENSOMEG00000004948	sar1ab	72	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000023784	-	100	96.667	ENSACIG00000012192	-	100	96.667	Amphilophus_citrinellus
ENSOMEG00000023784	-	84	96.689	ENSAOCG00000001275	-	88	96.689	Amphiprion_ocellaris
ENSOMEG00000023784	-	100	96.667	ENSAPEG00000016909	-	100	96.667	Amphiprion_percula
ENSOMEG00000023784	-	100	98.333	ENSATEG00000003174	-	100	98.333	Anabas_testudineus
ENSOMEG00000023784	-	100	95.556	ENSACLG00000004123	-	100	95.556	Astatotilapia_calliptera
ENSOMEG00000023784	-	100	93.923	ENSAMXG00000019845	arf1	100	93.923	Astyanax_mexicanus
ENSOMEG00000023784	-	100	97.222	ENSCVAG00000013374	-	100	97.222	Cyprinodon_variegatus
ENSOMEG00000023784	-	100	93.923	ENSDARG00000009484	arf1	100	93.923	Danio_rerio
ENSOMEG00000023784	-	100	94.475	ENSELUG00000022533	arf1	79	94.475	Esox_lucius
ENSOMEG00000023784	-	100	97.778	ENSFHEG00000005859	-	100	97.778	Fundulus_heteroclitus
ENSOMEG00000023784	-	96	88.439	ENSGMOG00000000429	arf1	95	88.439	Gadus_morhua
ENSOMEG00000023784	-	100	97.222	ENSGAFG00000018151	-	100	97.222	Gambusia_affinis
ENSOMEG00000023784	-	100	85.556	ENSGACG00000014195	-	97	85.556	Gasterosteus_aculeatus
ENSOMEG00000023784	-	100	95.556	ENSHBUG00000002636	-	100	95.556	Haplochromis_burtoni
ENSOMEG00000023784	-	100	93.370	ENSIPUG00000006311	arf1	100	93.370	Ictalurus_punctatus
ENSOMEG00000023784	-	100	96.111	ENSKMAG00000018315	-	100	96.111	Kryptolebias_marmoratus
ENSOMEG00000023784	-	99	88.202	ENSLBEG00000001998	arf1	99	88.202	Labrus_bergylta
ENSOMEG00000023784	-	99	89.326	ENSLBEG00000023263	-	98	89.326	Labrus_bergylta
ENSOMEG00000023784	-	100	97.778	ENSMAMG00000001553	-	100	97.778	Mastacembelus_armatus
ENSOMEG00000023784	-	100	95.556	ENSMZEG00005022594	-	100	95.556	Maylandia_zebra
ENSOMEG00000023784	-	100	97.778	ENSMALG00000004269	-	100	97.778	Monopterus_albus
ENSOMEG00000023784	-	100	95.556	ENSNBRG00000016455	-	100	95.556	Neolamprologus_brichardi
ENSOMEG00000023784	-	100	95.556	ENSONIG00000001286	-	100	95.556	Oreochromis_niloticus
ENSOMEG00000023784	-	100	100.000	ENSORLG00000023270	-	100	100.000	Oryzias_latipes
ENSOMEG00000023784	-	100	99.444	ENSORLG00020006712	-	100	99.444	Oryzias_latipes_hni
ENSOMEG00000023784	-	100	100.000	ENSORLG00015019836	-	100	100.000	Oryzias_latipes_hsok
ENSOMEG00000023784	-	100	89.503	ENSPMGG00000014174	arf1	100	89.503	Periophthalmus_magnuspinnatus
ENSOMEG00000023784	-	100	93.333	ENSPMAG00000002035	arf1	100	93.333	Petromyzon_marinus
ENSOMEG00000023784	-	100	97.222	ENSPFOG00000014787	-	100	97.222	Poecilia_formosa
ENSOMEG00000023784	-	100	97.222	ENSPLAG00000001041	-	100	97.222	Poecilia_latipinna
ENSOMEG00000023784	-	100	97.222	ENSPMEG00000024077	-	100	97.222	Poecilia_mexicana
ENSOMEG00000023784	-	100	97.222	ENSPREG00000009009	-	100	97.222	Poecilia_reticulata
ENSOMEG00000023784	-	100	95.556	ENSPNYG00000009472	-	100	95.556	Pundamilia_nyererei
ENSOMEG00000023784	-	94	96.450	ENSPNAG00000000098	arf1	93	96.450	Pygocentrus_nattereri
ENSOMEG00000023784	-	99	77.654	YDL137W	-	99	77.654	Saccharomyces_cerevisiae
ENSOMEG00000023784	-	99	78.333	YDL192W	-	99	78.771	Saccharomyces_cerevisiae
ENSOMEG00000023784	-	100	90.556	ENSSMAG00000006125	-	100	90.556	Scophthalmus_maximus
ENSOMEG00000023784	-	100	97.222	ENSSDUG00000017356	-	100	97.222	Seriola_dumerili
ENSOMEG00000023784	-	100	97.222	ENSSLDG00000008504	-	100	97.222	Seriola_lalandi_dorsalis
ENSOMEG00000023784	-	100	98.333	ENSSPAG00000011431	-	100	98.333	Stegastes_partitus
ENSOMEG00000023784	-	100	96.111	ENSTRUG00000019870	-	100	96.111	Takifugu_rubripes
ENSOMEG00000023784	-	100	94.444	ENSTNIG00000011685	-	100	94.444	Tetraodon_nigroviridis
ENSOMEG00000023784	-	100	97.222	ENSXCOG00000016687	-	98	97.222	Xiphophorus_couchianus
ENSOMEG00000023784	-	100	97.222	ENSXMAG00000009193	-	100	97.222	Xiphophorus_maculatus