EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000023809 (Gene tree)
Gene ID: 112145950
Gene Symbol: gpatch8
Alias: -
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 30795 bases
Position: chrNVQA01000010.1:16360355-16391149
Accession: 112145950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000036301	zf-C2H2_jaz	PF12171.8	5.5e-06	1	1
ENSOMEP00000036295	zf-C2H2_jaz	PF12171.8	5.6e-06	1	1
ENSOMEP00000036306	zf-C2H2_jaz	PF12171.8	5.8e-06	1	1
ENSOMEP00000036306	G-patch	PF01585.23	5.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000036811	-	9509	-	ENSOMEP00000036306	1481 (aa)	XP_024127224	UPI000CF7F385
ENSOMET00000036810	-	9268	-	ENSOMEP00000036301	1402 (aa)	XP_024127230	UPI000CF807C5
ENSOMET00000031641	-	9289	-	ENSOMEP00000036295	1434 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000023809's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000023809's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000023809	gpatch8	100	80.705	ENSACIG00000012241	gpatch8	56	75.981	Amphilophus_citrinellus
ENSOMEG00000023809	gpatch8	61	74.345	ENSATEG00000003247	gpatch8	56	72.488	Anabas_testudineus
ENSOMEG00000023809	gpatch8	100	80.387	ENSACLG00000004165	gpatch8	56	74.344	Astatotilapia_calliptera
ENSOMEG00000023809	gpatch8	59	59.294	ENSAMXG00000041683	gpatch8	56	58.571	Astyanax_mexicanus
ENSOMEG00000023809	gpatch8	100	61.809	ENSDARG00000059768	gpatch8	56	58.276	Danio_rerio
ENSOMEG00000023809	gpatch8	100	63.817	ENSELUG00000019920	gpatch8	57	62.171	Esox_lucius
ENSOMEG00000023809	gpatch8	56	73.413	ENSFHEG00000005791	gpatch8	56	72.912	Fundulus_heteroclitus
ENSOMEG00000023809	gpatch8	74	54.726	ENSGALG00000041556	GPATCH8	57	61.776	Gallus_gallus
ENSOMEG00000023809	gpatch8	100	80.093	ENSHBUG00000002669	gpatch8	56	74.078	Haplochromis_burtoni
ENSOMEG00000023809	gpatch8	76	58.268	ENSHGLG00100010738	GPATCH8	65	59.504	Heterocephalus_glaber_male
ENSOMEG00000023809	gpatch8	61	69.390	ENSHCOG00000017518	gpatch8	56	69.212	Hippocampus_comes
ENSOMEG00000023809	gpatch8	59	61.026	ENSIPUG00000015431	gpatch8	55	59.064	Ictalurus_punctatus
ENSOMEG00000023809	gpatch8	61	81.034	ENSLOCG00000012265	gpatch8	70	75.887	Lepisosteus_oculatus
ENSOMEG00000023809	gpatch8	100	80.387	ENSMZEG00005022584	gpatch8	56	74.224	Maylandia_zebra
ENSOMEG00000023809	gpatch8	100	77.173	ENSMMOG00000020472	gpatch8	55	72.944	Mola_mola
ENSOMEG00000023809	gpatch8	100	78.557	ENSMALG00000004204	gpatch8	55	73.892	Monopterus_albus
ENSOMEG00000023809	gpatch8	50	61.272	ENSMLUG00000013840	GPATCH8	52	62.130	Myotis_lucifugus
ENSOMEG00000023809	gpatch8	100	80.626	ENSNBRG00000016402	gpatch8	56	74.911	Neolamprologus_brichardi
ENSOMEG00000023809	gpatch8	100	77.297	ENSONIG00000001292	gpatch8	55	69.203	Oreochromis_niloticus
ENSOMEG00000023809	gpatch8	61	52.648	ENSPKIG00000018753	gpatch8	56	52.706	Paramormyrops_kingsleyae
ENSOMEG00000023809	gpatch8	100	80.520	ENSPNYG00000009426	gpatch8	56	74.463	Pundamilia_nyererei
ENSOMEG00000023809	gpatch8	59	60.173	ENSPNAG00000016200	gpatch8	58	60.502	Pygocentrus_nattereri
ENSOMEG00000023809	gpatch8	61	68.845	ENSTRUG00000020474	gpatch8	55	66.508	Takifugu_rubripes
ENSOMEG00000023809	gpatch8	58	58.923	ENSTBEG00000009486	GPATCH8	54	62.791	Tupaia_belangeri
ENSOMEG00000023809	gpatch8	55	73.981	ENSXCOG00000016680	gpatch8	56	73.810	Xiphophorus_couchianus
ENSOMEG00000023809	gpatch8	55	74.279	ENSXMAG00000009217	gpatch8	56	73.986	Xiphophorus_maculatus