EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000023912 (Gene tree)
Gene ID: 112145744
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 10669 bases
Position: chrNVQA01000009.1:28624935-28635603
Accession: 112145744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000021803	RRM_1	PF00076.22	3.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000016393	-	2505	-	ENSOMEP00000021803	244 (aa)	XP_024126932	UPI000CF81F48

Gene Model

Click here to download ENSOMEG00000023912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000023912's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000023912	-	99	57.600	ENSOMEG00000006805	rbm38	98	57.143
ENSOMEG00000023912	-	56	75.912	ENSOMEG00000011760	rbm24a	100	57.085
ENSOMEG00000023912	-	64	69.512	ENSOMEG00000021525	rbm24b	100	59.036

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000023912	-	92	64.069	ENSG00000132819	RBM38	94	86.441	Homo_sapiens
ENSOMEG00000023912	-	100	64.143	ENSAPOG00000003301	rbm38	98	63.745	Acanthochromis_polyacanthus
ENSOMEG00000023912	-	100	90.984	ENSAPOG00000009939	-	100	90.984	Acanthochromis_polyacanthus
ENSOMEG00000023912	-	100	62.698	ENSACIG00000000010	rbm38	98	61.905	Amphilophus_citrinellus
ENSOMEG00000023912	-	100	91.393	ENSACIG00000012502	-	100	96.610	Amphilophus_citrinellus
ENSOMEG00000023912	-	97	90.717	ENSAOCG00000012559	RBM38	100	90.717	Amphiprion_ocellaris
ENSOMEG00000023912	-	100	64.143	ENSAOCG00000013497	-	98	63.745	Amphiprion_ocellaris
ENSOMEG00000023912	-	100	64.143	ENSAPEG00000013137	rbm38	98	63.745	Amphiprion_percula
ENSOMEG00000023912	-	100	90.574	ENSAPEG00000023581	-	100	90.574	Amphiprion_percula
ENSOMEG00000023912	-	100	92.213	ENSATEG00000016710	-	100	92.213	Anabas_testudineus
ENSOMEG00000023912	-	100	62.698	ENSATEG00000016366	rbm38	98	62.698	Anabas_testudineus
ENSOMEG00000023912	-	95	67.234	ENSACAG00000016238	RBM38	95	62.602	Anolis_carolinensis
ENSOMEG00000023912	-	92	64.935	ENSANAG00000031959	RBM38	78	93.617	Aotus_nancymaae
ENSOMEG00000023912	-	100	90.574	ENSACLG00000019514	-	100	90.574	Astatotilapia_calliptera
ENSOMEG00000023912	-	96	64.103	ENSAMXG00000038120	rbm38	82	67.513	Astyanax_mexicanus
ENSOMEG00000023912	-	100	75.820	ENSAMXG00000015601	-	100	71.721	Astyanax_mexicanus
ENSOMEG00000023912	-	92	63.636	ENSBTAG00000008105	RBM38	89	62.771	Bos_taurus
ENSOMEG00000023912	-	56	64.706	WBGene00006321	sup-12	63	78.947	Caenorhabditis_elegans
ENSOMEG00000023912	-	92	64.935	ENSCJAG00000019139	RBM38	78	93.617	Callithrix_jacchus
ENSOMEG00000023912	-	92	65.801	ENSCAFG00020021943	RBM38	89	65.086	Canis_lupus_dingo
ENSOMEG00000023912	-	99	60.729	ENSCHIG00000002609	RBM38	92	59.350	Capra_hircus
ENSOMEG00000023912	-	92	64.502	ENSCPOG00000012781	RBM38	89	64.069	Cavia_porcellus
ENSOMEG00000023912	-	92	64.935	ENSCCAG00000036872	RBM38	78	93.617	Cebus_capucinus
ENSOMEG00000023912	-	92	64.502	ENSCATG00000032133	RBM38	78	93.617	Cercocebus_atys
ENSOMEG00000023912	-	92	64.069	ENSCLAG00000005906	RBM38	92	63.203	Chinchilla_lanigera
ENSOMEG00000023912	-	92	64.502	ENSCSAG00000015503	RBM38	89	62.174	Chlorocebus_sabaeus
ENSOMEG00000023912	-	95	67.227	ENSCPBG00000024059	RBM38	100	63.713	Chrysemys_picta_bellii
ENSOMEG00000023912	-	62	60.870	ENSCING00000025102	-	53	72.581	Ciona_intestinalis
ENSOMEG00000023912	-	95	49.362	ENSCANG00000030105	-	80	45.957	Colobus_angolensis_palliatus
ENSOMEG00000023912	-	72	73.077	ENSCGRG00001012928	Rbm38	89	60.870	Cricetulus_griseus_chok1gshd
ENSOMEG00000023912	-	100	87.705	ENSCSEG00000004701	-	100	87.705	Cynoglossus_semilaevis
ENSOMEG00000023912	-	77	60.733	ENSCSEG00000020943	rbm38	60	65.193	Cynoglossus_semilaevis
ENSOMEG00000023912	-	99	59.438	ENSCVAG00000015952	rbm38	98	59.127	Cyprinodon_variegatus
ENSOMEG00000023912	-	100	87.705	ENSCVAG00000005472	-	100	87.705	Cyprinodon_variegatus
ENSOMEG00000023912	-	99	70.370	ENSDARG00000058818	rbm38	82	78.974	Danio_rerio
ENSOMEG00000023912	-	92	65.217	ENSDNOG00000032004	RBM38	98	62.719	Dasypus_novemcinctus
ENSOMEG00000023912	-	92	64.935	ENSECAG00000007700	RBM38	89	62.771	Equus_caballus
ENSOMEG00000023912	-	92	63.362	ENSEEUG00000013489	RBM38	89	62.174	Erinaceus_europaeus
ENSOMEG00000023912	-	90	66.372	ENSELUG00000000585	-	98	63.111	Esox_lucius
ENSOMEG00000023912	-	100	79.920	ENSELUG00000005849	-	100	76.305	Esox_lucius
ENSOMEG00000023912	-	92	65.368	ENSFCAG00000042916	RBM38	82	88.119	Felis_catus
ENSOMEG00000023912	-	71	75.706	ENSFALG00000010805	RBM38	90	72.571	Ficedula_albicollis
ENSOMEG00000023912	-	100	60.317	ENSFHEG00000017748	rbm38	98	59.524	Fundulus_heteroclitus
ENSOMEG00000023912	-	100	81.855	ENSFHEG00000006160	-	100	82.258	Fundulus_heteroclitus
ENSOMEG00000023912	-	75	84.324	ENSGMOG00000016655	-	99	82.703	Gadus_morhua
ENSOMEG00000023912	-	95	66.809	ENSGALG00000026081	RBM38	100	63.559	Gallus_gallus
ENSOMEG00000023912	-	95	64.224	ENSGACG00000015224	rbm38	100	63.793	Gasterosteus_aculeatus
ENSOMEG00000023912	-	94	82.174	ENSGACG00000009873	-	100	81.739	Gasterosteus_aculeatus
ENSOMEG00000023912	-	95	67.647	ENSGAGG00000001187	RBM38	100	63.713	Gopherus_agassizii
ENSOMEG00000023912	-	100	90.574	ENSHBUG00000011778	-	100	90.574	Haplochromis_burtoni
ENSOMEG00000023912	-	100	63.889	ENSHBUG00000012058	rbm38	98	63.095	Haplochromis_burtoni
ENSOMEG00000023912	-	92	61.739	ENSHGLG00000015077	RBM38	89	62.821	Heterocephalus_glaber_female
ENSOMEG00000023912	-	91	49.145	ENSHCOG00000019040	rbm38	78	53.061	Hippocampus_comes
ENSOMEG00000023912	-	85	87.923	ENSHCOG00000005622	-	56	89.286	Hippocampus_comes
ENSOMEG00000023912	-	100	71.660	ENSIPUG00000019349	-	100	68.826	Ictalurus_punctatus
ENSOMEG00000023912	-	92	58.798	ENSKMAG00000012402	rbm38	99	58.120	Kryptolebias_marmoratus
ENSOMEG00000023912	-	100	63.492	ENSLBEG00000018878	rbm38	98	62.698	Labrus_bergylta
ENSOMEG00000023912	-	100	89.113	ENSLBEG00000016163	RBM38	100	89.113	Labrus_bergylta
ENSOMEG00000023912	-	100	74.180	ENSLOCG00000003456	rbm38	100	72.131	Lepisosteus_oculatus
ENSOMEG00000023912	-	92	64.502	ENSMFAG00000043808	RBM38	78	93.617	Macaca_fascicularis
ENSOMEG00000023912	-	92	64.502	ENSMMUG00000031391	RBM38	78	93.617	Macaca_mulatta
ENSOMEG00000023912	-	92	64.502	ENSMNEG00000034683	RBM38	78	93.617	Macaca_nemestrina
ENSOMEG00000023912	-	100	89.754	ENSMAMG00000020499	RBM38	100	89.754	Mastacembelus_armatus
ENSOMEG00000023912	-	100	64.314	ENSMAMG00000024135	rbm38	98	62.302	Mastacembelus_armatus
ENSOMEG00000023912	-	100	63.889	ENSMZEG00005026036	rbm38	98	63.095	Maylandia_zebra
ENSOMEG00000023912	-	100	90.574	ENSMZEG00005000849	-	100	90.574	Maylandia_zebra
ENSOMEG00000023912	-	92	63.636	ENSMAUG00000021211	Rbm38	89	60.870	Mesocricetus_auratus
ENSOMEG00000023912	-	92	65.086	ENSMICG00000038011	RBM38	98	63.636	Microcebus_murinus
ENSOMEG00000023912	-	92	64.069	ENSMOCG00000008715	Rbm38	89	61.304	Microtus_ochrogaster
ENSOMEG00000023912	-	100	90.984	ENSMMOG00000020051	-	100	90.984	Mola_mola
ENSOMEG00000023912	-	95	65.532	ENSMODG00000016458	RBM38	92	63.445	Monodelphis_domestica
ENSOMEG00000023912	-	77	92.593	ENSMALG00000004680	RBM38	72	92.593	Monopterus_albus
ENSOMEG00000023912	-	69	69.412	ENSMALG00000022327	rbm38	72	69.643	Monopterus_albus
ENSOMEG00000023912	-	92	61.304	MGP_CAROLIEiJ_G0024745	Rbm38	89	62.771	Mus_caroli
ENSOMEG00000023912	-	92	61.304	ENSMUSG00000027510	Rbm38	89	62.771	Mus_musculus
ENSOMEG00000023912	-	92	62.609	MGP_PahariEiJ_G0026186	Rbm38	89	62.771	Mus_pahari
ENSOMEG00000023912	-	92	61.304	MGP_SPRETEiJ_G0025665	Rbm38	89	62.771	Mus_spretus
ENSOMEG00000023912	-	72	74.176	ENSMPUG00000006518	RBM38	89	73.077	Mustela_putorius_furo
ENSOMEG00000023912	-	92	64.069	ENSMLUG00000011140	RBM38	98	61.304	Myotis_lucifugus
ENSOMEG00000023912	-	100	90.984	ENSNBRG00000022545	-	100	90.984	Neolamprologus_brichardi
ENSOMEG00000023912	-	100	64.286	ENSNBRG00000022685	rbm38	98	63.492	Neolamprologus_brichardi
ENSOMEG00000023912	-	92	64.069	ENSODEG00000007980	RBM38	89	63.636	Octodon_degus
ENSOMEG00000023912	-	99	64.143	ENSONIG00000017073	rbm38	100	63.347	Oreochromis_niloticus
ENSOMEG00000023912	-	99	90.947	ENSONIG00000020324	-	100	90.947	Oreochromis_niloticus
ENSOMEG00000023912	-	92	66.667	ENSOANG00000009259	RBM38	81	63.436	Ornithorhynchus_anatinus
ENSOMEG00000023912	-	100	96.341	ENSORLG00000027180	-	100	96.341	Oryzias_latipes
ENSOMEG00000023912	-	99	56.000	ENSORLG00000012154	rbm38	98	55.556	Oryzias_latipes
ENSOMEG00000023912	-	100	56.349	ENSORLG00020017871	rbm38	98	56.349	Oryzias_latipes_hni
ENSOMEG00000023912	-	100	96.341	ENSORLG00020020751	-	100	96.341	Oryzias_latipes_hni
ENSOMEG00000023912	-	100	96.735	ENSORLG00015017040	-	100	96.735	Oryzias_latipes_hsok
ENSOMEG00000023912	-	100	56.349	ENSORLG00015012606	rbm38	98	56.349	Oryzias_latipes_hsok
ENSOMEG00000023912	-	92	64.502	ENSOGAG00000029136	RBM38	88	63.203	Otolemur_garnettii
ENSOMEG00000023912	-	92	65.368	ENSPPRG00000009507	RBM38	82	88.119	Panthera_pardus
ENSOMEG00000023912	-	52	84.127	ENSPTRG00000045845	-	68	84.127	Pan_troglodytes
ENSOMEG00000023912	-	72	73.626	ENSPTRG00000013661	RBM38	82	89.109	Pan_troglodytes
ENSOMEG00000023912	-	92	54.113	ENSPANG00000033127	-	91	50.435	Papio_anubis
ENSOMEG00000023912	-	92	64.502	ENSPANG00000020919	-	78	93.617	Papio_anubis
ENSOMEG00000023912	-	100	69.076	ENSPKIG00000025417	rbm38	100	68.273	Paramormyrops_kingsleyae
ENSOMEG00000023912	-	100	70.850	ENSPKIG00000018122	-	97	88.596	Paramormyrops_kingsleyae
ENSOMEG00000023912	-	95	67.227	ENSPSIG00000011649	RBM38	92	63.291	Pelodiscus_sinensis
ENSOMEG00000023912	-	99	62.550	ENSPMGG00000011343	rbm38	98	61.200	Periophthalmus_magnuspinnatus
ENSOMEG00000023912	-	100	81.855	ENSPMGG00000017094	-	100	81.855	Periophthalmus_magnuspinnatus
ENSOMEG00000023912	-	95	65.966	ENSPCIG00000013648	RBM38	92	63.025	Phascolarctos_cinereus
ENSOMEG00000023912	-	100	57.812	ENSPFOG00000011658	rbm38	98	58.039	Poecilia_formosa
ENSOMEG00000023912	-	100	86.179	ENSPLAG00000002500	-	100	83.740	Poecilia_latipinna
ENSOMEG00000023912	-	100	58.366	ENSPLAG00000005218	rbm38	98	58.039	Poecilia_latipinna
ENSOMEG00000023912	-	100	57.422	ENSPMEG00000015770	rbm38	98	58.039	Poecilia_mexicana
ENSOMEG00000023912	-	100	57.812	ENSPREG00000007398	rbm38	98	58.039	Poecilia_reticulata
ENSOMEG00000023912	-	92	65.517	ENSPCOG00000026201	RBM38	77	93.617	Propithecus_coquereli
ENSOMEG00000023912	-	96	41.909	ENSPVAG00000006457	RBM38	92	42.083	Pteropus_vampyrus
ENSOMEG00000023912	-	100	63.492	ENSPNYG00000021373	rbm38	98	62.698	Pundamilia_nyererei
ENSOMEG00000023912	-	100	90.574	ENSPNYG00000019727	-	100	95.763	Pundamilia_nyererei
ENSOMEG00000023912	-	100	75.000	ENSPNAG00000015123	-	98	82.836	Pygocentrus_nattereri
ENSOMEG00000023912	-	96	67.660	ENSPNAG00000010596	rbm38	82	74.490	Pygocentrus_nattereri
ENSOMEG00000023912	-	92	65.368	ENSRNOG00000006420	Rbm38	89	64.502	Rattus_norvegicus
ENSOMEG00000023912	-	95	52.991	ENSRROG00000036388	-	90	49.787	Rhinopithecus_roxellana
ENSOMEG00000023912	-	92	64.502	ENSSBOG00000031053	RBM38	93	89.109	Saimiri_boliviensis_boliviensis
ENSOMEG00000023912	-	100	67.742	ENSSFOG00015004453	rbm38	100	70.850	Scleropages_formosus
ENSOMEG00000023912	-	100	91.393	ENSSDUG00000021082	RBM38	100	91.393	Seriola_dumerili
ENSOMEG00000023912	-	100	64.286	ENSSDUG00000022611	rbm38	98	64.286	Seriola_dumerili
ENSOMEG00000023912	-	100	64.286	ENSSLDG00000010845	rbm38	98	64.286	Seriola_lalandi_dorsalis
ENSOMEG00000023912	-	100	91.393	ENSSLDG00000011778	RBM38	100	91.393	Seriola_lalandi_dorsalis
ENSOMEG00000023912	-	100	92.213	ENSSPAG00000020989	RBM38	100	92.213	Stegastes_partitus
ENSOMEG00000023912	-	100	63.889	ENSSPAG00000011113	rbm38	98	63.492	Stegastes_partitus
ENSOMEG00000023912	-	92	65.368	ENSSSCG00000007504	RBM38	89	64.069	Sus_scrofa
ENSOMEG00000023912	-	96	63.750	ENSTRUG00000024954	rbm38	94	62.917	Takifugu_rubripes
ENSOMEG00000023912	-	100	85.306	ENSTRUG00000019869	-	100	84.490	Takifugu_rubripes
ENSOMEG00000023912	-	95	82.403	ENSTNIG00000007093	-	100	81.818	Tetraodon_nigroviridis
ENSOMEG00000023912	-	92	65.368	ENSUAMG00000019780	RBM38	89	64.224	Ursus_americanus
ENSOMEG00000023912	-	92	65.801	ENSVVUG00000017246	RBM38	89	65.086	Vulpes_vulpes
ENSOMEG00000023912	-	95	63.830	ENSXETG00000011268	rbm38	99	60.426	Xenopus_tropicalis
ENSOMEG00000023912	-	71	76.966	ENSXCOG00000017324	-	68	84.211	Xiphophorus_couchianus
ENSOMEG00000023912	-	100	60.079	ENSXMAG00000023662	rbm38	98	60.317	Xiphophorus_maculatus