EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000023951 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 3663 bases
Position: chrNVQA01000010.1:14808157-14811819
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000000059	RVT_1	PF00078.27	1.3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000016473	-	3663	-	ENSOMEP00000000059	1220 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000023951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000023951's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000023951	-	59	30.054	ENSOMEG00000011861	-	75	30.054
ENSOMEG00000023951	-	55	30.175	ENSOMEG00000007684	-	50	30.175
ENSOMEG00000023951	-	51	33.125	ENSOMEG00000000573	-	58	33.125
ENSOMEG00000023951	-	53	30.484	ENSOMEG00000012600	-	82	30.484
ENSOMEG00000023951	-	50	30.498	ENSOMEG00000006056	-	56	30.498
ENSOMEG00000023951	-	50	31.715	ENSOMEG00000013437	-	99	31.715
ENSOMEG00000023951	-	79	31.915	ENSOMEG00000002638	-	75	31.915
ENSOMEG00000023951	-	88	32.091	ENSOMEG00000015349	-	75	32.000
ENSOMEG00000023951	-	64	30.024	ENSOMEG00000011191	-	58	30.024
ENSOMEG00000023951	-	62	30.153	ENSOMEG00000013280	-	72	30.153
ENSOMEG00000023951	-	79	31.919	ENSOMEG00000015506	-	75	31.919
ENSOMEG00000023951	-	68	31.641	ENSOMEG00000017295	-	76	31.641
ENSOMEG00000023951	-	63	35.652	ENSOMEG00000003712	-	54	35.652
ENSOMEG00000023951	-	74	45.686	ENSOMEG00000015073	-	99	45.686
ENSOMEG00000023951	-	60	46.332	ENSOMEG00000005634	-	99	46.332

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000023951	-	90	45.919	ENSAPOG00000007435	-	81	46.022	Acanthochromis_polyacanthus
ENSOMEG00000023951	-	55	50.957	ENSAPOG00000021580	-	92	50.957	Acanthochromis_polyacanthus
ENSOMEG00000023951	-	55	48.110	ENSAPOG00000012937	-	93	48.110	Acanthochromis_polyacanthus
ENSOMEG00000023951	-	62	57.314	ENSACLG00000027124	-	99	57.314	Astatotilapia_calliptera
ENSOMEG00000023951	-	90	45.398	ENSACLG00000002872	-	81	45.144	Astatotilapia_calliptera
ENSOMEG00000023951	-	95	76.384	ENSACLG00000016675	-	85	76.384	Astatotilapia_calliptera
ENSOMEG00000023951	-	89	45.714	ENSACLG00000002238	-	90	45.622	Astatotilapia_calliptera
ENSOMEG00000023951	-	89	77.665	ENSACLG00000005909	-	99	77.665	Astatotilapia_calliptera
ENSOMEG00000023951	-	97	53.962	ENSACLG00000002243	-	87	53.878	Astatotilapia_calliptera
ENSOMEG00000023951	-	72	59.819	ENSACLG00000004748	-	99	59.819	Astatotilapia_calliptera
ENSOMEG00000023951	-	90	45.317	ENSACLG00000018325	-	81	45.234	Astatotilapia_calliptera
ENSOMEG00000023951	-	88	51.434	ENSCSEG00000010440	-	77	51.251	Cynoglossus_semilaevis
ENSOMEG00000023951	-	79	47.059	ENSFHEG00000022554	-	68	47.059	Fundulus_heteroclitus
ENSOMEG00000023951	-	88	36.837	ENSLACG00000014947	-	83	36.837	Latimeria_chalumnae
ENSOMEG00000023951	-	88	45.682	ENSLACG00000003314	-	85	49.167	Latimeria_chalumnae
ENSOMEG00000023951	-	68	39.784	ENSLACG00000007131	-	99	39.784	Latimeria_chalumnae
ENSOMEG00000023951	-	55	51.471	ENSONIG00000020960	-	89	51.471	Oreochromis_niloticus