EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSOMEG00000023956 (Gene tree)
Gene ID: 112146833
Gene Symbol: raver1
Alias: -
Full Name: ribonucleoprotein%2C PTB-binding 1
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Plus strand
Length: 10241 bases
Position: chrNVQA01000010.1:14835556-14845796
Accession: ZDB-GENE-050522-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000000050	RRM_1	PF00076.22	1.8e-29	1	2
ENSOMEP00000000050	RRM_1	PF00076.22	1.8e-29	2	2
ENSOMEP00000021768	RRM_1	PF00076.22	2.9e-29	1	2
ENSOMEP00000021768	RRM_1	PF00076.22	2.9e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000016480	-	1977	-	ENSOMEP00000000050	658 (aa)	-	-
ENSOMET00000016479	-	5434	-	ENSOMEP00000021768	753 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000023956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000023956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000023956	raver1	67	81.633	ENSG00000161847	RAVER1	61	81.633	Homo_sapiens
ENSOMEG00000023956	raver1	97	91.667	ENSAPOG00000017267	raver1	86	80.786	Acanthochromis_polyacanthus
ENSOMEG00000023956	raver1	67	81.633	ENSAMEG00000011738	RAVER1	59	81.633	Ailuropoda_melanoleuca
ENSOMEG00000023956	raver1	97	91.667	ENSAOCG00000005128	raver1	91	82.070	Amphiprion_ocellaris
ENSOMEG00000023956	raver1	98	92.453	ENSAPEG00000010854	raver1	100	76.420	Amphiprion_percula
ENSOMEG00000023956	raver1	98	72.905	ENSATEG00000021004	raver1	94	80.175	Anabas_testudineus
ENSOMEG00000023956	raver1	79	48.986	ENSACAG00000008386	-	94	48.777	Anolis_carolinensis
ENSOMEG00000023956	raver1	67	81.633	ENSANAG00000028226	RAVER1	60	81.633	Aotus_nancymaae
ENSOMEG00000023956	raver1	100	93.878	ENSACLG00000018492	raver1	100	76.136	Astatotilapia_calliptera
ENSOMEG00000023956	raver1	92	65.350	ENSAMXG00000005132	raver1	100	62.571	Astyanax_mexicanus
ENSOMEG00000023956	raver1	67	81.633	ENSBTAG00000015721	RAVER1	97	50.716	Bos_taurus
ENSOMEG00000023956	raver1	67	81.633	ENSCJAG00000005671	RAVER1	60	81.633	Callithrix_jacchus
ENSOMEG00000023956	raver1	69	81.633	ENSCAFG00000017861	RAVER1	95	49.648	Canis_familiaris
ENSOMEG00000023956	raver1	69	81.633	ENSCAFG00020024449	RAVER1	98	49.860	Canis_lupus_dingo
ENSOMEG00000023956	raver1	67	83.673	ENSCHIG00000006718	RAVER1	62	83.673	Capra_hircus
ENSOMEG00000023956	raver1	61	83.333	ENSTSYG00000027107	RAVER1	100	51.402	Carlito_syrichta
ENSOMEG00000023956	raver1	67	81.633	ENSCAPG00000002269	RAVER1	62	81.633	Cavia_aperea
ENSOMEG00000023956	raver1	66	81.633	ENSCPOG00000001008	RAVER1	60	81.633	Cavia_porcellus
ENSOMEG00000023956	raver1	67	81.633	ENSCCAG00000031723	RAVER1	60	81.633	Cebus_capucinus
ENSOMEG00000023956	raver1	67	81.633	ENSCATG00000043863	RAVER1	60	81.633	Cercocebus_atys
ENSOMEG00000023956	raver1	79	81.633	ENSCLAG00000009336	RAVER1	72	81.633	Chinchilla_lanigera
ENSOMEG00000023956	raver1	67	81.633	ENSCSAG00000007317	RAVER1	50	81.633	Chlorocebus_sabaeus
ENSOMEG00000023956	raver1	93	83.019	ENSCPBG00000005349	-	89	83.019	Chrysemys_picta_bellii
ENSOMEG00000023956	raver1	67	83.333	ENSCANG00000008337	RAVER1	60	81.633	Colobus_angolensis_palliatus
ENSOMEG00000023956	raver1	67	83.673	ENSCGRG00001013260	-	75	83.673	Cricetulus_griseus_chok1gshd
ENSOMEG00000023956	raver1	67	83.673	ENSCGRG00000015138	-	75	83.673	Cricetulus_griseus_crigri
ENSOMEG00000023956	raver1	98	72.474	ENSCSEG00000021092	raver1	100	72.374	Cynoglossus_semilaevis
ENSOMEG00000023956	raver1	100	84.906	ENSCVAG00000013971	raver1	92	84.906	Cyprinodon_variegatus
ENSOMEG00000023956	raver1	98	62.204	ENSDARG00000052617	raver1	89	75.347	Danio_rerio
ENSOMEG00000023956	raver1	57	83.673	ENSDNOG00000035742	-	54	83.673	Dasypus_novemcinctus
ENSOMEG00000023956	raver1	66	81.633	ENSDORG00000010106	-	98	46.695	Dipodomys_ordii
ENSOMEG00000023956	raver1	54	39.394	ENSEBUG00000003030	RAVER1	53	39.394	Eptatretus_burgeri
ENSOMEG00000023956	raver1	56	69.333	ENSEASG00005010544	-	69	68.684	Equus_asinus_asinus
ENSOMEG00000023956	raver1	67	81.633	ENSECAG00000024966	RAVER1	59	81.633	Equus_caballus
ENSOMEG00000023956	raver1	98	91.837	ENSELUG00000023287	raver1	100	67.308	Esox_lucius
ENSOMEG00000023956	raver1	67	81.633	ENSFCAG00000009435	RAVER1	59	81.633	Felis_catus
ENSOMEG00000023956	raver1	78	81.633	ENSFDAG00000015113	RAVER1	72	81.633	Fukomys_damarensis
ENSOMEG00000023956	raver1	90	67.042	ENSGMOG00000003649	raver1	93	67.066	Gadus_morhua
ENSOMEG00000023956	raver1	100	77.456	ENSGAFG00000015944	raver1	94	76.778	Gambusia_affinis
ENSOMEG00000023956	raver1	94	63.014	ENSGACG00000013818	raver1	100	64.384	Gasterosteus_aculeatus
ENSOMEG00000023956	raver1	90	83.019	ENSGAGG00000011748	-	89	83.019	Gopherus_agassizii
ENSOMEG00000023956	raver1	67	81.633	ENSGGOG00000006015	RAVER1	60	81.633	Gorilla_gorilla
ENSOMEG00000023956	raver1	99	93.182	ENSHBUG00000021210	raver1	100	75.847	Haplochromis_burtoni
ENSOMEG00000023956	raver1	66	81.633	ENSHGLG00000015460	RAVER1	60	81.633	Heterocephalus_glaber_female
ENSOMEG00000023956	raver1	66	81.633	ENSHGLG00100000812	RAVER1	60	81.633	Heterocephalus_glaber_male
ENSOMEG00000023956	raver1	100	94.118	ENSHCOG00000000449	raver1	93	94.118	Hippocampus_comes
ENSOMEG00000023956	raver1	98	62.963	ENSIPUG00000013153	raver1	100	64.006	Ictalurus_punctatus
ENSOMEG00000023956	raver1	67	81.633	ENSSTOG00000003241	RAVER1	61	81.633	Ictidomys_tridecemlineatus
ENSOMEG00000023956	raver1	67	83.673	ENSJJAG00000018219	-	60	83.673	Jaculus_jaculus
ENSOMEG00000023956	raver1	100	97.959	ENSKMAG00000017355	raver1	91	97.959	Kryptolebias_marmoratus
ENSOMEG00000023956	raver1	93	81.392	ENSLBEG00000008268	raver1	96	79.941	Labrus_bergylta
ENSOMEG00000023956	raver1	72	85.714	ENSLACG00000005809	-	75	85.714	Latimeria_chalumnae
ENSOMEG00000023956	raver1	96	84.906	ENSLOCG00000007500	raver1	93	89.796	Lepisosteus_oculatus
ENSOMEG00000023956	raver1	69	81.633	ENSLAFG00000003664	-	99	48.854	Loxodonta_africana
ENSOMEG00000023956	raver1	67	81.633	ENSMFAG00000037977	RAVER1	59	81.633	Macaca_fascicularis
ENSOMEG00000023956	raver1	67	81.633	ENSMMUG00000014897	RAVER1	59	81.633	Macaca_mulatta
ENSOMEG00000023956	raver1	67	83.333	ENSMNEG00000028390	RAVER1	58	83.333	Macaca_nemestrina
ENSOMEG00000023956	raver1	67	81.633	ENSMLEG00000041959	RAVER1	60	81.633	Mandrillus_leucophaeus
ENSOMEG00000023956	raver1	98	90.566	ENSMAMG00000012059	raver1	94	90.566	Mastacembelus_armatus
ENSOMEG00000023956	raver1	100	93.878	ENSMZEG00005019002	raver1	100	76.136	Maylandia_zebra
ENSOMEG00000023956	raver1	67	83.673	ENSMAUG00000017948	-	75	83.673	Mesocricetus_auratus
ENSOMEG00000023956	raver1	67	81.250	ENSMICG00000010326	RAVER1	97	51.170	Microcebus_murinus
ENSOMEG00000023956	raver1	67	83.673	ENSMOCG00000015553	-	72	83.673	Microtus_ochrogaster
ENSOMEG00000023956	raver1	98	73.859	ENSMMOG00000012093	raver1	100	73.978	Mola_mola
ENSOMEG00000023956	raver1	61	66.748	ENSMODG00000005584	-	82	50.302	Monodelphis_domestica
ENSOMEG00000023956	raver1	100	97.959	ENSMALG00000016569	raver1	94	97.959	Monopterus_albus
ENSOMEG00000023956	raver1	71	83.673	MGP_CAROLIEiJ_G0031860	-	75	83.673	Mus_caroli
ENSOMEG00000023956	raver1	67	83.673	ENSMUSG00000010205	Raver1	75	83.673	Mus_musculus
ENSOMEG00000023956	raver1	67	83.673	MGP_PahariEiJ_G0014726	-	76	83.673	Mus_pahari
ENSOMEG00000023956	raver1	67	83.673	MGP_SPRETEiJ_G0032984	-	75	83.673	Mus_spretus
ENSOMEG00000023956	raver1	66	81.633	ENSMPUG00000006712	RAVER1	59	81.633	Mustela_putorius_furo
ENSOMEG00000023956	raver1	67	81.633	ENSMLUG00000012328	RAVER1	96	51.304	Myotis_lucifugus
ENSOMEG00000023956	raver1	67	81.633	ENSNGAG00000001260	-	62	81.633	Nannospalax_galili
ENSOMEG00000023956	raver1	100	91.837	ENSNBRG00000010139	raver1	93	72.052	Neolamprologus_brichardi
ENSOMEG00000023956	raver1	67	81.633	ENSNLEG00000012181	RAVER1	60	81.633	Nomascus_leucogenys
ENSOMEG00000023956	raver1	59	87.755	ENSMEUG00000003281	-	61	87.755	Notamacropus_eugenii
ENSOMEG00000023956	raver1	66	81.633	ENSODEG00000016260	RAVER1	75	81.633	Octodon_degus
ENSOMEG00000023956	raver1	91	76.480	ENSONIG00000001559	raver1	99	82.143	Oreochromis_niloticus
ENSOMEG00000023956	raver1	80	81.633	ENSOCUG00000020918	RAVER1	73	81.633	Oryctolagus_cuniculus
ENSOMEG00000023956	raver1	93	93.638	ENSORLG00000005458	raver1	98	93.638	Oryzias_latipes
ENSOMEG00000023956	raver1	96	91.930	ENSORLG00020004392	raver1	100	91.930	Oryzias_latipes_hni
ENSOMEG00000023956	raver1	93	94.454	ENSORLG00015017222	raver1	98	94.454	Oryzias_latipes_hsok
ENSOMEG00000023956	raver1	67	81.633	ENSOGAG00000011071	RAVER1	60	81.633	Otolemur_garnettii
ENSOMEG00000023956	raver1	67	81.633	ENSOARG00000015886	RAVER1	59	81.633	Ovis_aries
ENSOMEG00000023956	raver1	67	81.633	ENSPPAG00000002611	RAVER1	60	81.633	Pan_paniscus
ENSOMEG00000023956	raver1	67	81.633	ENSPPRG00000009912	RAVER1	59	81.633	Panthera_pardus
ENSOMEG00000023956	raver1	67	81.633	ENSPTRG00000010466	RAVER1	60	81.633	Pan_troglodytes
ENSOMEG00000023956	raver1	67	81.633	ENSPANG00000004122	RAVER1	60	81.633	Papio_anubis
ENSOMEG00000023956	raver1	67	83.673	ENSPEMG00000016411	-	99	54.784	Peromyscus_maniculatus_bairdii
ENSOMEG00000023956	raver1	69	87.755	ENSPCIG00000018695	-	66	87.755	Phascolarctos_cinereus
ENSOMEG00000023956	raver1	100	67.158	ENSPFOG00000007016	raver1	94	74.574	Poecilia_formosa
ENSOMEG00000023956	raver1	93	77.456	ENSPLAG00000020793	raver1	99	76.115	Poecilia_latipinna
ENSOMEG00000023956	raver1	100	72.385	ENSPMEG00000011220	raver1	100	72.385	Poecilia_mexicana
ENSOMEG00000023956	raver1	100	74.490	ENSPREG00000006864	raver1	100	74.490	Poecilia_reticulata
ENSOMEG00000023956	raver1	67	81.633	ENSPPYG00000010514	RAVER1	51	81.633	Pongo_abelii
ENSOMEG00000023956	raver1	67	81.633	ENSPCOG00000026605	RAVER1	59	81.633	Propithecus_coquereli
ENSOMEG00000023956	raver1	66	81.633	ENSPVAG00000003689	RAVER1	73	81.633	Pteropus_vampyrus
ENSOMEG00000023956	raver1	100	74.616	ENSPNYG00000013284	raver1	100	73.082	Pundamilia_nyererei
ENSOMEG00000023956	raver1	98	63.712	ENSPNAG00000015476	raver1	100	64.714	Pygocentrus_nattereri
ENSOMEG00000023956	raver1	67	83.673	ENSRNOG00000020710	Raver1	74	83.673	Rattus_norvegicus
ENSOMEG00000023956	raver1	67	83.333	ENSRBIG00000034702	RAVER1	95	51.506	Rhinopithecus_bieti
ENSOMEG00000023956	raver1	67	83.333	ENSRROG00000031186	RAVER1	95	51.506	Rhinopithecus_roxellana
ENSOMEG00000023956	raver1	60	67.910	ENSSBOG00000023423	RAVER1	95	51.511	Saimiri_boliviensis_boliviensis
ENSOMEG00000023956	raver1	60	87.755	ENSSHAG00000008181	-	59	87.755	Sarcophilus_harrisii
ENSOMEG00000023956	raver1	98	92.453	ENSSMAG00000004546	raver1	100	80.386	Scophthalmus_maximus
ENSOMEG00000023956	raver1	98	94.340	ENSSDUG00000021063	raver1	100	83.333	Seriola_dumerili
ENSOMEG00000023956	raver1	98	92.453	ENSSLDG00000014505	raver1	100	83.333	Seriola_lalandi_dorsalis
ENSOMEG00000023956	raver1	98	92.453	ENSSPAG00000000688	raver1	92	92.453	Stegastes_partitus
ENSOMEG00000023956	raver1	67	81.633	ENSSSCG00000013650	-	96	50.862	Sus_scrofa
ENSOMEG00000023956	raver1	98	73.740	ENSTRUG00000025641	raver1	94	76.419	Takifugu_rubripes
ENSOMEG00000023956	raver1	67	81.633	ENSTTRG00000009552	RAVER1	61	81.633	Tursiops_truncatus
ENSOMEG00000023956	raver1	67	81.633	ENSUAMG00000020385	RAVER1	59	81.633	Ursus_americanus
ENSOMEG00000023956	raver1	62	66.667	ENSVVUG00000028976	RAVER1	95	50.352	Vulpes_vulpes
ENSOMEG00000023956	raver1	93	85.714	ENSXETG00000011622	raver1	96	85.714	Xenopus_tropicalis
ENSOMEG00000023956	raver1	100	78.261	ENSXCOG00000016368	raver1	99	78.261	Xiphophorus_couchianus
ENSOMEG00000023956	raver1	100	76.688	ENSXMAG00000000217	raver1	94	77.649	Xiphophorus_maculatus