EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSOMEG00000023959 (Gene tree)
Gene ID: 112146664
Gene Symbol: elavl3
Alias: -
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Oryzias_melastigma
Status: putative
Strand: Minus strand
Length: 23479 bases
Position: chrNVQA01000010.1:14907878-14931356
Accession: 112146664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSOMEP00000021766	RRM_5	PF13893.6	1.9e-12	1	2
ENSOMEP00000021766	RRM_5	PF13893.6	1.9e-12	2	2
ENSOMEP00000021773	RRM_5	PF13893.6	2.8e-12	1	2
ENSOMEP00000021773	RRM_5	PF13893.6	2.8e-12	2	2
ENSOMEP00000000055	RRM_5	PF13893.6	3e-12	1	2
ENSOMEP00000000055	RRM_5	PF13893.6	3e-12	2	2
ENSOMEP00000021766	RRM_1	PF00076.22	1.5e-64	1	3
ENSOMEP00000021766	RRM_1	PF00076.22	1.5e-64	2	3
ENSOMEP00000021766	RRM_1	PF00076.22	1.5e-64	3	3
ENSOMEP00000021773	RRM_1	PF00076.22	2e-64	1	3
ENSOMEP00000021773	RRM_1	PF00076.22	2e-64	2	3
ENSOMEP00000021773	RRM_1	PF00076.22	2e-64	3	3
ENSOMEP00000000055	RRM_1	PF00076.22	2.3e-64	1	3
ENSOMEP00000000055	RRM_1	PF00076.22	2.3e-64	2	3
ENSOMEP00000000055	RRM_1	PF00076.22	2.3e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSOMET00000016485	-	5797	XM_024272587	ENSOMEP00000000055	376 (aa)	XP_024128355	UPI0009DA8F7E
ENSOMET00000016486	-	1466	-	ENSOMEP00000021773	371 (aa)	-	-
ENSOMET00000016487	-	1038	-	ENSOMEP00000021766	345 (aa)	-	-

Gene Model

Click here to download ENSOMEG00000023959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSOMEG00000023959's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSOMEG00000023959	elavl3	74	41.860	ENSOMEG00000007034	celf3a	57	41.860
ENSOMEG00000023959	elavl3	87	30.201	ENSOMEG00000021030	-	73	30.201
ENSOMEG00000023959	elavl3	68	37.179	ENSOMEG00000016484	tia1l	67	37.179
ENSOMEG00000023959	elavl3	90	34.940	ENSOMEG00000013627	pabpc1b	69	34.940
ENSOMEG00000023959	elavl3	87	41.304	ENSOMEG00000023599	-	73	41.304
ENSOMEG00000023959	elavl3	85	41.860	ENSOMEG00000002391	celf4	59	41.860
ENSOMEG00000023959	elavl3	99	83.380	ENSOMEG00000009988	elavl4	92	83.380
ENSOMEG00000023959	elavl3	55	32.821	ENSOMEG00000014637	-	80	32.394
ENSOMEG00000023959	elavl3	74	34.574	ENSOMEG00000016468	rbms2b	52	34.031
ENSOMEG00000023959	elavl3	86	30.667	ENSOMEG00000002000	-	53	32.530
ENSOMEG00000023959	elavl3	89	40.698	ENSOMEG00000015364	si:dkey-205h23.2	65	40.698
ENSOMEG00000023959	elavl3	90	71.565	ENSOMEG00000015457	elavl1a	91	71.565
ENSOMEG00000023959	elavl3	92	36.145	ENSOMEG00000014410	pabpc4	62	36.145
ENSOMEG00000023959	elavl3	76	43.023	ENSOMEG00000000277	-	55	43.023
ENSOMEG00000023959	elavl3	89	40.698	ENSOMEG00000019511	celf5a	63	40.698
ENSOMEG00000023959	elavl3	80	42.105	ENSOMEG00000002381	celf1	67	35.664
ENSOMEG00000023959	elavl3	88	41.860	ENSOMEG00000009131	celf3b	64	41.860
ENSOMEG00000023959	elavl3	88	37.179	ENSOMEG00000020931	tia1	67	37.179
ENSOMEG00000023959	elavl3	77	37.349	ENSOMEG00000020219	pabpc1a	59	37.349
ENSOMEG00000023959	elavl3	51	35.519	ENSOMEG00000007677	-	51	35.519
ENSOMEG00000023959	elavl3	66	36.667	ENSOMEG00000021369	rbms2a	55	34.615
ENSOMEG00000023959	elavl3	96	65.361	ENSOMEG00000015322	-	93	65.663
ENSOMEG00000023959	elavl3	99	78.571	ENSOMEG00000005178	ELAVL2	94	78.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSOMEG00000023959	elavl3	100	85.556	ENSG00000196361	ELAVL3	100	86.667	Homo_sapiens
ENSOMEG00000023959	elavl3	99	99.419	ENSAPOG00000017565	elavl3	100	99.709	Acanthochromis_polyacanthus
ENSOMEG00000023959	elavl3	99	85.955	ENSAMEG00000010487	ELAVL3	99	87.079	Ailuropoda_melanoleuca
ENSOMEG00000023959	elavl3	99	99.419	ENSACIG00000024190	elavl3	100	99.709	Amphilophus_citrinellus
ENSOMEG00000023959	elavl3	100	99.710	ENSAOCG00000005054	elavl3	100	99.710	Amphiprion_ocellaris
ENSOMEG00000023959	elavl3	100	99.710	ENSAPEG00000011145	elavl3	100	99.710	Amphiprion_percula
ENSOMEG00000023959	elavl3	98	100.000	ENSATEG00000020941	elavl3	99	100.000	Anabas_testudineus
ENSOMEG00000023959	elavl3	98	89.167	ENSACAG00000016958	ELAVL3	96	86.207	Anolis_carolinensis
ENSOMEG00000023959	elavl3	100	85.794	ENSANAG00000030798	ELAVL3	100	86.908	Aotus_nancymaae
ENSOMEG00000023959	elavl3	100	99.420	ENSACLG00000018260	elavl3	100	99.420	Astatotilapia_calliptera
ENSOMEG00000023959	elavl3	100	98.261	ENSAMXG00000040498	elavl3	100	98.261	Astyanax_mexicanus
ENSOMEG00000023959	elavl3	100	85.833	ENSBTAG00000014412	ELAVL3	100	86.944	Bos_taurus
ENSOMEG00000023959	elavl3	100	83.924	ENSCJAG00000005589	ELAVL3	100	85.014	Callithrix_jacchus
ENSOMEG00000023959	elavl3	100	83.924	ENSCAFG00000017350	ELAVL3	100	85.014	Canis_familiaris
ENSOMEG00000023959	elavl3	99	89.213	ENSCAFG00020004614	ELAVL3	99	88.418	Canis_lupus_dingo
ENSOMEG00000023959	elavl3	99	84.573	ENSCHIG00000003436	ELAVL3	99	85.675	Capra_hircus
ENSOMEG00000023959	elavl3	99	84.298	ENSTSYG00000036621	ELAVL3	99	85.399	Carlito_syrichta
ENSOMEG00000023959	elavl3	90	70.175	ENSCAPG00000017620	ELAVL3	99	72.222	Cavia_aperea
ENSOMEG00000023959	elavl3	90	70.175	ENSCPOG00000001793	ELAVL3	99	72.222	Cavia_porcellus
ENSOMEG00000023959	elavl3	100	85.083	ENSCCAG00000034350	ELAVL3	100	86.188	Cebus_capucinus
ENSOMEG00000023959	elavl3	100	83.924	ENSCATG00000044086	ELAVL3	100	85.014	Cercocebus_atys
ENSOMEG00000023959	elavl3	100	83.651	ENSCLAG00000016404	ELAVL3	100	84.741	Chinchilla_lanigera
ENSOMEG00000023959	elavl3	96	91.304	ENSCSAG00000006755	ELAVL3	100	91.304	Chlorocebus_sabaeus
ENSOMEG00000023959	elavl3	99	92.711	ENSCPBG00000023982	ELAVL3	100	88.889	Chrysemys_picta_bellii
ENSOMEG00000023959	elavl3	99	85.515	ENSCANG00000038728	ELAVL3	100	86.630	Colobus_angolensis_palliatus
ENSOMEG00000023959	elavl3	100	83.379	ENSCGRG00001018927	Elavl3	100	84.469	Cricetulus_griseus_chok1gshd
ENSOMEG00000023959	elavl3	99	83.747	ENSCGRG00000007158	Elavl3	99	84.848	Cricetulus_griseus_crigri
ENSOMEG00000023959	elavl3	100	98.841	ENSCSEG00000021095	elavl3	100	98.841	Cynoglossus_semilaevis
ENSOMEG00000023959	elavl3	100	100.000	ENSCVAG00000014060	elavl3	100	100.000	Cyprinodon_variegatus
ENSOMEG00000023959	elavl3	100	99.420	ENSDARG00000014420	elavl3	100	99.420	Danio_rerio
ENSOMEG00000023959	elavl3	99	84.270	ENSDORG00000002538	Elavl3	99	85.393	Dipodomys_ordii
ENSOMEG00000023959	elavl3	100	83.924	ENSEASG00005004561	ELAVL3	100	85.014	Equus_asinus_asinus
ENSOMEG00000023959	elavl3	98	89.971	ENSECAG00000020594	ELAVL3	100	91.150	Equus_caballus
ENSOMEG00000023959	elavl3	98	97.688	ENSELUG00000023043	elavl3	98	97.688	Esox_lucius
ENSOMEG00000023959	elavl3	100	83.924	ENSFCAG00000024763	ELAVL3	100	85.014	Felis_catus
ENSOMEG00000023959	elavl3	100	86.127	ENSFDAG00000008449	ELAVL3	100	86.127	Fukomys_damarensis
ENSOMEG00000023959	elavl3	100	100.000	ENSFHEG00000001675	elavl3	100	100.000	Fundulus_heteroclitus
ENSOMEG00000023959	elavl3	100	95.810	ENSGMOG00000003760	elavl3	100	95.810	Gadus_morhua
ENSOMEG00000023959	elavl3	50	61.475	ENSGALG00000054488	-	78	65.041	Gallus_gallus
ENSOMEG00000023959	elavl3	58	76.378	ENSGALG00000047364	-	100	76.378	Gallus_gallus
ENSOMEG00000023959	elavl3	99	96.338	ENSGAFG00000016015	elavl3	98	96.338	Gambusia_affinis
ENSOMEG00000023959	elavl3	99	97.421	ENSGACG00000013839	elavl3	99	97.421	Gasterosteus_aculeatus
ENSOMEG00000023959	elavl3	83	91.810	ENSGAGG00000016141	ELAVL3	95	91.810	Gopherus_agassizii
ENSOMEG00000023959	elavl3	99	84.298	ENSGGOG00000008635	ELAVL3	99	85.399	Gorilla_gorilla
ENSOMEG00000023959	elavl3	100	99.420	ENSHBUG00000020978	elavl3	100	99.420	Haplochromis_burtoni
ENSOMEG00000023959	elavl3	100	83.924	ENSHGLG00000015199	ELAVL3	100	85.014	Heterocephalus_glaber_female
ENSOMEG00000023959	elavl3	83	67.361	ENSHGLG00000019379	-	97	67.361	Heterocephalus_glaber_female
ENSOMEG00000023959	elavl3	95	82.235	ENSHGLG00100011200	ELAVL3	100	83.381	Heterocephalus_glaber_male
ENSOMEG00000023959	elavl3	100	97.443	ENSHCOG00000015894	elavl3	100	97.443	Hippocampus_comes
ENSOMEG00000023959	elavl3	99	98.834	ENSIPUG00000013002	elavl3	98	98.834	Ictalurus_punctatus
ENSOMEG00000023959	elavl3	100	83.924	ENSSTOG00000021111	ELAVL3	100	85.014	Ictidomys_tridecemlineatus
ENSOMEG00000023959	elavl3	99	85.124	ENSJJAG00000023513	Elavl3	99	85.124	Jaculus_jaculus
ENSOMEG00000023959	elavl3	99	99.419	ENSKMAG00000017412	elavl3	100	99.709	Kryptolebias_marmoratus
ENSOMEG00000023959	elavl3	100	99.130	ENSLBEG00000008073	elavl3	100	98.939	Labrus_bergylta
ENSOMEG00000023959	elavl3	100	92.877	ENSLOCG00000007647	elavl3	100	92.877	Lepisosteus_oculatus
ENSOMEG00000023959	elavl3	99	84.066	ENSLAFG00000005013	ELAVL3	99	85.165	Loxodonta_africana
ENSOMEG00000023959	elavl3	99	85.714	ENSMFAG00000003692	ELAVL3	99	86.835	Macaca_fascicularis
ENSOMEG00000023959	elavl3	99	85.714	ENSMMUG00000020616	ELAVL3	99	86.835	Macaca_mulatta
ENSOMEG00000023959	elavl3	99	85.714	ENSMNEG00000043973	ELAVL3	100	86.351	Macaca_nemestrina
ENSOMEG00000023959	elavl3	97	83.265	ENSMLEG00000013976	ELAVL3	100	83.265	Mandrillus_leucophaeus
ENSOMEG00000023959	elavl3	99	99.415	ENSMAMG00000011697	elavl3	99	99.415	Mastacembelus_armatus
ENSOMEG00000023959	elavl3	100	99.710	ENSMZEG00005019053	elavl3	100	99.710	Maylandia_zebra
ENSOMEG00000023959	elavl3	99	83.747	ENSMAUG00000016478	Elavl3	99	84.848	Mesocricetus_auratus
ENSOMEG00000023959	elavl3	99	84.298	ENSMICG00000016528	ELAVL3	99	85.399	Microcebus_murinus
ENSOMEG00000023959	elavl3	100	83.379	ENSMOCG00000002046	Elavl3	100	84.469	Microtus_ochrogaster
ENSOMEG00000023959	elavl3	99	100.000	ENSMMOG00000012154	elavl3	99	100.000	Mola_mola
ENSOMEG00000023959	elavl3	99	87.640	ENSMODG00000006653	ELAVL3	95	85.831	Monodelphis_domestica
ENSOMEG00000023959	elavl3	99	95.798	ENSMALG00000016659	elavl3	100	95.798	Monopterus_albus
ENSOMEG00000023959	elavl3	98	86.080	MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	Mus_caroli
ENSOMEG00000023959	elavl3	100	83.379	ENSMUSG00000003410	Elavl3	100	84.469	Mus_musculus
ENSOMEG00000023959	elavl3	98	85.795	MGP_PahariEiJ_G0014760	Elavl3	100	86.932	Mus_pahari
ENSOMEG00000023959	elavl3	52	81.739	MGP_SPRETEiJ_G0033017	-	51	82.609	Mus_spretus
ENSOMEG00000023959	elavl3	100	83.651	ENSMPUG00000005040	ELAVL3	100	84.741	Mustela_putorius_furo
ENSOMEG00000023959	elavl3	99	85.440	ENSMLUG00000016320	ELAVL3	99	85.440	Myotis_lucifugus
ENSOMEG00000023959	elavl3	100	83.924	ENSNGAG00000000968	Elavl3	100	85.014	Nannospalax_galili
ENSOMEG00000023959	elavl3	99	96.338	ENSNBRG00000010319	elavl3	99	96.338	Neolamprologus_brichardi
ENSOMEG00000023959	elavl3	99	88.154	ENSMEUG00000016706	ELAVL3	99	88.154	Notamacropus_eugenii
ENSOMEG00000023959	elavl3	85	89.362	ENSOPRG00000007373	ELAVL3	95	89.362	Ochotona_princeps
ENSOMEG00000023959	elavl3	100	83.924	ENSODEG00000015790	ELAVL3	100	85.205	Octodon_degus
ENSOMEG00000023959	elavl3	99	96.338	ENSONIG00000001538	elavl3	98	96.338	Oreochromis_niloticus
ENSOMEG00000023959	elavl3	89	84.815	ENSOANG00000015046	ELAVL3	98	86.905	Ornithorhynchus_anatinus
ENSOMEG00000023959	elavl3	100	96.369	ENSORLG00000005379	elavl3	100	96.369	Oryzias_latipes
ENSOMEG00000023959	elavl3	100	100.000	ENSORLG00020004570	elavl3	100	100.000	Oryzias_latipes_hni
ENSOMEG00000023959	elavl3	100	95.531	ENSORLG00015000662	elavl3	100	95.531	Oryzias_latipes_hsok
ENSOMEG00000023959	elavl3	100	83.924	ENSOGAG00000007072	ELAVL3	100	85.014	Otolemur_garnettii
ENSOMEG00000023959	elavl3	100	84.196	ENSOARG00000018464	ELAVL3	100	85.286	Ovis_aries
ENSOMEG00000023959	elavl3	100	83.924	ENSPPAG00000033972	ELAVL3	100	85.014	Pan_paniscus
ENSOMEG00000023959	elavl3	100	83.924	ENSPPRG00000005151	ELAVL3	100	85.014	Panthera_pardus
ENSOMEG00000023959	elavl3	97	84.071	ENSPTIG00000013610	ELAVL3	97	85.546	Panthera_tigris_altaica
ENSOMEG00000023959	elavl3	100	83.924	ENSPTRG00000010506	ELAVL3	100	85.014	Pan_troglodytes
ENSOMEG00000023959	elavl3	99	85.714	ENSPANG00000005849	ELAVL3	99	86.835	Papio_anubis
ENSOMEG00000023959	elavl3	100	98.841	ENSPKIG00000016207	elavl3	100	98.841	Paramormyrops_kingsleyae
ENSOMEG00000023959	elavl3	100	99.710	ENSPMGG00000002016	elavl3	100	99.710	Periophthalmus_magnuspinnatus
ENSOMEG00000023959	elavl3	98	99.729	ENSPFOG00000007754	elavl3	100	99.729	Poecilia_formosa
ENSOMEG00000023959	elavl3	100	98.841	ENSPLAG00000001547	elavl3	99	100.000	Poecilia_latipinna
ENSOMEG00000023959	elavl3	98	100.000	ENSPMEG00000010156	elavl3	99	100.000	Poecilia_mexicana
ENSOMEG00000023959	elavl3	100	100.000	ENSPREG00000006971	elavl3	100	100.000	Poecilia_reticulata
ENSOMEG00000023959	elavl3	84	80.224	ENSPPYG00000009583	-	98	81.343	Pongo_abelii
ENSOMEG00000023959	elavl3	83	88.182	ENSPCAG00000015952	ELAVL3	60	90.909	Procavia_capensis
ENSOMEG00000023959	elavl3	100	83.924	ENSPCOG00000023781	ELAVL3	100	85.014	Propithecus_coquereli
ENSOMEG00000023959	elavl3	100	83.924	ENSPVAG00000014893	ELAVL3	100	85.014	Pteropus_vampyrus
ENSOMEG00000023959	elavl3	100	99.420	ENSPNYG00000013186	elavl3	98	99.709	Pundamilia_nyererei
ENSOMEG00000023959	elavl3	100	98.841	ENSPNAG00000003633	elavl3	100	98.841	Pygocentrus_nattereri
ENSOMEG00000023959	elavl3	100	83.379	ENSRNOG00000013752	Elavl3	100	84.469	Rattus_norvegicus
ENSOMEG00000023959	elavl3	98	86.402	ENSRBIG00000034762	ELAVL3	99	87.535	Rhinopithecus_bieti
ENSOMEG00000023959	elavl3	89	86.000	ENSRROG00000034305	ELAVL3	99	90.435	Rhinopithecus_roxellana
ENSOMEG00000023959	elavl3	99	84.298	ENSSBOG00000030047	ELAVL3	100	89.103	Saimiri_boliviensis_boliviensis
ENSOMEG00000023959	elavl3	96	93.478	ENSSHAG00000005583	ELAVL3	100	93.478	Sarcophilus_harrisii
ENSOMEG00000023959	elavl3	98	94.970	ENSSFOG00015023630	elavl3	100	98.769	Scleropages_formosus
ENSOMEG00000023959	elavl3	99	99.123	ENSSMAG00000004671	elavl3	99	99.123	Scophthalmus_maximus
ENSOMEG00000023959	elavl3	99	99.419	ENSSDUG00000020708	elavl3	100	99.419	Seriola_dumerili
ENSOMEG00000023959	elavl3	99	99.419	ENSSLDG00000013769	elavl3	100	99.419	Seriola_lalandi_dorsalis
ENSOMEG00000023959	elavl3	99	74.451	ENSSARG00000005949	ELAVL3	99	75.549	Sorex_araneus
ENSOMEG00000023959	elavl3	99	99.709	ENSSPAG00000000990	elavl3	100	99.709	Stegastes_partitus
ENSOMEG00000023959	elavl3	100	83.924	ENSSSCG00000013617	ELAVL3	100	85.014	Sus_scrofa
ENSOMEG00000023959	elavl3	98	100.000	ENSTRUG00000010719	elavl3	99	100.000	Takifugu_rubripes
ENSOMEG00000023959	elavl3	99	95.531	ENSTNIG00000018572	elavl3	99	95.531	Tetraodon_nigroviridis
ENSOMEG00000023959	elavl3	97	81.595	ENSTBEG00000006133	ELAVL3	99	82.822	Tupaia_belangeri
ENSOMEG00000023959	elavl3	100	83.651	ENSTTRG00000001789	ELAVL3	100	84.741	Tursiops_truncatus
ENSOMEG00000023959	elavl3	97	90.149	ENSUAMG00000000405	ELAVL3	96	91.343	Ursus_americanus
ENSOMEG00000023959	elavl3	98	82.392	ENSUMAG00000019546	ELAVL3	88	83.828	Ursus_maritimus
ENSOMEG00000023959	elavl3	100	85.556	ENSVVUG00000023733	ELAVL3	100	86.667	Vulpes_vulpes
ENSOMEG00000023959	elavl3	99	92.151	ENSXETG00000016741	elavl3	99	92.151	Xenopus_tropicalis
ENSOMEG00000023959	elavl3	100	100.000	ENSXMAG00000018287	elavl3	100	100.000	Xiphophorus_maculatus