EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000000151 (Gene tree)
Gene ID: 100696935
Gene Symbol: parn
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 12739 bases
Position: chrGL831395.1:108189-120927
Accession: 100696935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000000193	RNA_bind	PF08675.11	9.1e-34	1	1
ENSONIP00000000194	RNA_bind	PF08675.11	4.7e-32	1	1
ENSONIP00000000194	CAF1	PF04857.20	1.3e-90	1	1
ENSONIP00000000193	CAF1	PF04857.20	1.4e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000000192	-	3799	-	ENSONIP00000000193	679 (aa)	XP_003457808	I3IUA3
ENSONIT00000000193	-	1941	-	ENSONIP00000000194	646 (aa)	-	I3IUA4

Gene Model

Click here to download ENSONIG00000000151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000000151's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000000151	parn	100	70.046	ENSG00000140694	PARN	100	77.966	Homo_sapiens
ENSONIG00000000151	parn	100	69.325	ENSAMEG00000011208	PARN	100	69.325	Ailuropoda_melanoleuca
ENSONIG00000000151	parn	88	90.305	ENSACIG00000000619	parn	99	85.759	Amphilophus_citrinellus
ENSONIG00000000151	parn	100	89.650	ENSAOCG00000003465	parn	100	89.796	Amphiprion_ocellaris
ENSONIG00000000151	parn	74	94.947	ENSAPEG00000010661	parn	94	94.888	Amphiprion_percula
ENSONIG00000000151	parn	100	89.781	ENSATEG00000004661	parn	100	90.073	Anabas_testudineus
ENSONIG00000000151	parn	82	78.049	ENSAPLG00000013914	PARN	91	74.655	Anas_platyrhynchos
ENSONIG00000000151	parn	83	79.259	ENSACAG00000004973	PARN	90	74.068	Anolis_carolinensis
ENSONIG00000000151	parn	100	69.385	ENSANAG00000031516	PARN	100	77.966	Aotus_nancymaae
ENSONIG00000000151	parn	100	98.527	ENSACLG00000004742	parn	100	98.527	Astatotilapia_calliptera
ENSONIG00000000151	parn	100	72.540	ENSAMXG00000012390	parn	96	76.717	Astyanax_mexicanus
ENSONIG00000000151	parn	100	66.964	ENSBTAG00000018097	PARN	100	68.654	Bos_taurus
ENSONIG00000000151	parn	100	70.000	ENSCJAG00000015866	PARN	100	77.966	Callithrix_jacchus
ENSONIG00000000151	parn	100	69.029	ENSCAFG00000018795	PARN	100	68.182	Canis_familiaris
ENSONIG00000000151	parn	100	69.337	ENSCAFG00020024126	PARN	100	68.485	Canis_lupus_dingo
ENSONIG00000000151	parn	100	69.124	ENSCHIG00000018143	PARN	100	69.124	Capra_hircus
ENSONIG00000000151	parn	72	51.975	ENSCAPG00000007984	PARN	78	51.975	Cavia_aperea
ENSONIG00000000151	parn	100	68.098	ENSCPOG00000002263	PARN	100	68.558	Cavia_porcellus
ENSONIG00000000151	parn	100	69.846	ENSCCAG00000030367	PARN	100	77.966	Cebus_capucinus
ENSONIG00000000151	parn	83	79.143	ENSCATG00000041368	PARN	95	79.588	Cercocebus_atys
ENSONIG00000000151	parn	53	32.414	ENSCATG00000033196	PNLDC1	72	32.414	Cercocebus_atys
ENSONIG00000000151	parn	100	68.654	ENSCLAG00000015406	PARN	99	68.654	Chinchilla_lanigera
ENSONIG00000000151	parn	100	69.846	ENSCSAG00000008142	PARN	100	69.846	Chlorocebus_sabaeus
ENSONIG00000000151	parn	82	60.902	ENSCHOG00000007014	PARN	91	58.204	Choloepus_hoffmanni
ENSONIG00000000151	parn	74	79.289	ENSCPBG00000006609	PARN	90	75.191	Chrysemys_picta_bellii
ENSONIG00000000151	parn	80	42.322	ENSCING00000010142	-	99	42.509	Ciona_intestinalis
ENSONIG00000000151	parn	100	60.030	ENSCANG00000028849	-	100	77.966	Colobus_angolensis_palliatus
ENSONIG00000000151	parn	100	68.315	ENSCGRG00001012096	Parn	100	68.315	Cricetulus_griseus_chok1gshd
ENSONIG00000000151	parn	100	68.315	ENSCGRG00000004939	Parn	100	68.315	Cricetulus_griseus_crigri
ENSONIG00000000151	parn	100	83.430	ENSCSEG00000002064	parn	100	83.430	Cynoglossus_semilaevis
ENSONIG00000000151	parn	100	85.673	ENSCVAG00000014848	parn	100	85.380	Cyprinodon_variegatus
ENSONIG00000000151	parn	100	67.634	ENSDARG00000102634	parn	100	67.344	Danio_rerio
ENSONIG00000000151	parn	83	78.850	ENSDNOG00000000833	PARN	94	79.401	Dasypus_novemcinctus
ENSONIG00000000151	parn	65	75.758	ENSETEG00000014828	-	69	75.758	Echinops_telfairi
ENSONIG00000000151	parn	100	68.645	ENSEASG00005011400	PARN	100	68.645	Equus_asinus_asinus
ENSONIG00000000151	parn	100	68.493	ENSECAG00000017792	PARN	100	68.493	Equus_caballus
ENSONIG00000000151	parn	87	64.414	ENSEEUG00000010370	PARN	86	64.414	Erinaceus_europaeus
ENSONIG00000000151	parn	100	75.797	ENSELUG00000013139	parn	90	75.797	Esox_lucius
ENSONIG00000000151	parn	100	69.479	ENSFCAG00000044961	PARN	100	76.271	Felis_catus
ENSONIG00000000151	parn	99	68.992	ENSFALG00000003911	PARN	98	69.457	Ficedula_albicollis
ENSONIG00000000151	parn	100	69.372	ENSFDAG00000009234	PARN	100	69.372	Fukomys_damarensis
ENSONIG00000000151	parn	87	82.107	ENSFHEG00000013738	parn	92	91.525	Fundulus_heteroclitus
ENSONIG00000000151	parn	83	85.874	ENSGMOG00000003231	parn	99	85.273	Gadus_morhua
ENSONIG00000000151	parn	100	68.741	ENSGALG00000003091	PARN	100	68.960	Gallus_gallus
ENSONIG00000000151	parn	100	84.716	ENSGAFG00000011061	parn	100	83.988	Gambusia_affinis
ENSONIG00000000151	parn	100	81.944	ENSGACG00000019501	parn	100	81.481	Gasterosteus_aculeatus
ENSONIG00000000151	parn	83	79.406	ENSGGOG00000025224	PARN	94	75.171	Gorilla_gorilla
ENSONIG00000000151	parn	100	98.969	ENSHBUG00000017906	parn	100	98.969	Haplochromis_burtoni
ENSONIG00000000151	parn	100	68.654	ENSHGLG00000010886	PARN	100	68.502	Heterocephalus_glaber_female
ENSONIG00000000151	parn	100	68.654	ENSHGLG00100014659	PARN	100	68.502	Heterocephalus_glaber_male
ENSONIG00000000151	parn	87	79.545	ENSHCOG00000008683	parn	94	84.249	Hippocampus_comes
ENSONIG00000000151	parn	100	62.336	ENSIPUG00000012401	parn	100	62.245	Ictalurus_punctatus
ENSONIG00000000151	parn	100	68.550	ENSSTOG00000007519	PARN	100	68.550	Ictidomys_tridecemlineatus
ENSONIG00000000151	parn	100	69.029	ENSJJAG00000023049	Parn	100	69.029	Jaculus_jaculus
ENSONIG00000000151	parn	100	87.427	ENSKMAG00000009462	parn	100	87.427	Kryptolebias_marmoratus
ENSONIG00000000151	parn	93	89.342	ENSLBEG00000009167	parn	100	89.028	Labrus_bergylta
ENSONIG00000000151	parn	75	78.119	ENSLACG00000004207	PARN	100	75.708	Latimeria_chalumnae
ENSONIG00000000151	parn	100	72.780	ENSLOCG00000000715	parn	100	72.780	Lepisosteus_oculatus
ENSONIG00000000151	parn	100	69.692	ENSLAFG00000015036	PARN	100	69.692	Loxodonta_africana
ENSONIG00000000151	parn	100	63.692	ENSMFAG00000044852	PARN	100	77.966	Macaca_fascicularis
ENSONIG00000000151	parn	100	69.846	ENSMMUG00000018849	PARN	100	77.966	Macaca_mulatta
ENSONIG00000000151	parn	100	69.846	ENSMNEG00000045108	PARN	100	77.966	Macaca_nemestrina
ENSONIG00000000151	parn	100	69.692	ENSMLEG00000031743	PARN	100	77.966	Mandrillus_leucophaeus
ENSONIG00000000151	parn	100	90.684	ENSMAMG00000006939	parn	100	90.684	Mastacembelus_armatus
ENSONIG00000000151	parn	100	98.675	ENSMZEG00005013590	parn	100	98.675	Maylandia_zebra
ENSONIG00000000151	parn	82	76.460	ENSMGAG00000001004	PARN	90	72.569	Meleagris_gallopavo
ENSONIG00000000151	parn	100	64.188	ENSMAUG00000008025	Parn	100	64.177	Mesocricetus_auratus
ENSONIG00000000151	parn	51	30.822	ENSMAUG00000012298	Pnldc1	68	30.822	Mesocricetus_auratus
ENSONIG00000000151	parn	100	69.538	ENSMICG00000016053	PARN	100	76.271	Microcebus_murinus
ENSONIG00000000151	parn	76	79.555	ENSMOCG00000022211	Parn	100	79.394	Microtus_ochrogaster
ENSONIG00000000151	parn	100	77.589	ENSMMOG00000011333	parn	90	89.312	Mola_mola
ENSONIG00000000151	parn	76	81.250	ENSMODG00000004915	PARN	99	81.250	Monodelphis_domestica
ENSONIG00000000151	parn	96	90.259	ENSMALG00000019426	parn	94	94.404	Monopterus_albus
ENSONIG00000000151	parn	100	67.388	MGP_CAROLIEiJ_G0020466	Parn	100	67.388	Mus_caroli
ENSONIG00000000151	parn	100	66.924	ENSMUSG00000022685	Parn	100	75.610	Mus_musculus
ENSONIG00000000151	parn	100	68.000	MGP_PahariEiJ_G0016172	Parn	100	68.000	Mus_pahari
ENSONIG00000000151	parn	100	67.388	MGP_SPRETEiJ_G0021361	Parn	100	67.388	Mus_spretus
ENSONIG00000000151	parn	100	69.243	ENSMPUG00000014464	PARN	100	68.636	Mustela_putorius_furo
ENSONIG00000000151	parn	76	78.788	ENSMLUG00000005414	PARN	100	78.788	Myotis_lucifugus
ENSONIG00000000151	parn	100	83.591	ENSNBRG00000006805	parn	93	95.818	Neolamprologus_brichardi
ENSONIG00000000151	parn	100	70.000	ENSNLEG00000010241	PARN	100	77.966	Nomascus_leucogenys
ENSONIG00000000151	parn	73	65.000	ENSMEUG00000008178	-	74	65.000	Notamacropus_eugenii
ENSONIG00000000151	parn	99	64.496	ENSOPRG00000012187	PARN	92	69.363	Ochotona_princeps
ENSONIG00000000151	parn	100	63.567	ENSODEG00000001617	PARN	100	62.840	Octodon_degus
ENSONIG00000000151	parn	99	69.290	ENSOCUG00000000322	PARN	91	75.260	Oryctolagus_cuniculus
ENSONIG00000000151	parn	100	82.551	ENSORLG00020010313	parn	100	82.551	Oryzias_latipes_hni
ENSONIG00000000151	parn	100	82.258	ENSORLG00015000300	parn	100	82.258	Oryzias_latipes_hsok
ENSONIG00000000151	parn	100	81.168	ENSOMEG00000019555	parn	100	81.022	Oryzias_melastigma
ENSONIG00000000151	parn	76	79.234	ENSOGAG00000014626	PARN	100	79.234	Otolemur_garnettii
ENSONIG00000000151	parn	76	80.202	ENSOARG00000007574	PARN	100	80.202	Ovis_aries
ENSONIG00000000151	parn	100	69.892	ENSPPAG00000031438	PARN	100	77.966	Pan_paniscus
ENSONIG00000000151	parn	100	69.479	ENSPPRG00000018583	PARN	100	76.271	Panthera_pardus
ENSONIG00000000151	parn	100	69.479	ENSPTIG00000012135	PARN	100	76.271	Panthera_tigris_altaica
ENSONIG00000000151	parn	100	69.892	ENSPTRG00000007792	PARN	100	77.966	Pan_troglodytes
ENSONIG00000000151	parn	100	67.846	ENSPANG00000020099	PARN	100	77.966	Papio_anubis
ENSONIG00000000151	parn	99	70.429	ENSPKIG00000022807	parn	96	71.336	Paramormyrops_kingsleyae
ENSONIG00000000151	parn	83	78.664	ENSPSIG00000014804	PARN	100	68.197	Pelodiscus_sinensis
ENSONIG00000000151	parn	90	79.739	ENSPMGG00000014431	parn	85	80.065	Periophthalmus_magnuspinnatus
ENSONIG00000000151	parn	100	66.615	ENSPEMG00000018439	Parn	100	66.615	Peromyscus_maniculatus_bairdii
ENSONIG00000000151	parn	80	68.966	ENSPMAG00000003956	parn	98	69.364	Petromyzon_marinus
ENSONIG00000000151	parn	65	72.664	ENSPCIG00000001259	PARN	91	77.966	Phascolarctos_cinereus
ENSONIG00000000151	parn	100	85.255	ENSPFOG00000012823	parn	100	85.255	Poecilia_formosa
ENSONIG00000000151	parn	100	85.401	ENSPLAG00000006395	parn	100	85.401	Poecilia_latipinna
ENSONIG00000000151	parn	100	85.401	ENSPMEG00000007711	parn	100	85.401	Poecilia_mexicana
ENSONIG00000000151	parn	100	85.401	ENSPREG00000000147	parn	100	85.401	Poecilia_reticulata
ENSONIG00000000151	parn	100	69.525	ENSPPYG00000007123	PARN	100	69.525	Pongo_abelii
ENSONIG00000000151	parn	78	68.972	ENSPCAG00000001741	PARN	100	60.383	Procavia_capensis
ENSONIG00000000151	parn	100	66.769	ENSPCOG00000019292	PARN	100	76.271	Propithecus_coquereli
ENSONIG00000000151	parn	99	66.407	ENSPVAG00000002547	PARN	100	66.407	Pteropus_vampyrus
ENSONIG00000000151	parn	100	98.527	ENSPNYG00000006835	parn	100	98.527	Pundamilia_nyererei
ENSONIG00000000151	parn	93	72.613	ENSPNAG00000018905	parn	100	72.613	Pygocentrus_nattereri
ENSONIG00000000151	parn	100	67.273	ENSRNOG00000002912	Parn	96	79.592	Rattus_norvegicus
ENSONIG00000000151	parn	53	62.099	ENSRBIG00000018726	PARN	100	62.099	Rhinopithecus_bieti
ENSONIG00000000151	parn	53	62.099	ENSRROG00000011162	-	100	62.099	Rhinopithecus_roxellana
ENSONIG00000000151	parn	100	68.462	ENSSBOG00000034726	PARN	100	77.966	Saimiri_boliviensis_boliviensis
ENSONIG00000000151	parn	65	79.665	ENSSHAG00000008493	PARN	93	79.665	Sarcophilus_harrisii
ENSONIG00000000151	parn	100	71.286	ENSSFOG00015014165	parn	98	76.134	Scleropages_formosus
ENSONIG00000000151	parn	100	84.835	ENSSMAG00000000685	parn	100	85.265	Scophthalmus_maximus
ENSONIG00000000151	parn	100	91.121	ENSSDUG00000014555	parn	100	90.830	Seriola_dumerili
ENSONIG00000000151	parn	67	81.379	ENSSARG00000014339	PARN	75	81.379	Sorex_araneus
ENSONIG00000000151	parn	83	78.850	ENSSPUG00000007719	PARN	91	75.171	Sphenodon_punctatus
ENSONIG00000000151	parn	100	90.762	ENSSPAG00000007095	parn	100	90.762	Stegastes_partitus
ENSONIG00000000151	parn	100	69.018	ENSSSCG00000007878	PARN	80	74.567	Sus_scrofa
ENSONIG00000000151	parn	91	72.941	ENSTGUG00000004971	PARN	92	73.445	Taeniopygia_guttata
ENSONIG00000000151	parn	100	78.366	ENSTNIG00000008252	parn	99	84.219	Tetraodon_nigroviridis
ENSONIG00000000151	parn	91	58.615	ENSTBEG00000010407	PARN	100	57.667	Tupaia_belangeri
ENSONIG00000000151	parn	99	65.679	ENSTTRG00000002843	PARN	100	65.523	Tursiops_truncatus
ENSONIG00000000151	parn	67	71.889	ENSUAMG00000008283	PARN	94	68.349	Ursus_americanus
ENSONIG00000000151	parn	100	69.585	ENSUMAG00000004527	PARN	100	69.585	Ursus_maritimus
ENSONIG00000000151	parn	82	75.376	ENSVPAG00000008968	PARN	93	71.207	Vicugna_pacos
ENSONIG00000000151	parn	100	69.337	ENSVVUG00000019509	PARN	100	68.485	Vulpes_vulpes
ENSONIG00000000151	parn	100	65.158	ENSXETG00000010994	parn	100	77.083	Xenopus_tropicalis
ENSONIG00000000151	parn	87	83.838	ENSXCOG00000015990	parn	99	83.670	Xiphophorus_couchianus
ENSONIG00000000151	parn	100	83.796	ENSXMAG00000014783	parn	100	83.504	Xiphophorus_maculatus