EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000000277 (Gene tree)
Gene ID: -
Gene Symbol: smg7
Alias: -
Full Name: SMG7 nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 17082 bases
Position: chrGL831475.1:89582-106663
Accession: ZDB-GENE-030131-9122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000000351	EST1	PF10374.9	6.2e-27	1	1
ENSONIP00000000351	EST1_DNA_bind	PF10373.9	9.7e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000000350	-	4044	-	ENSONIP00000000351	1141 (aa)	-	I3IUR1

Gene Model

Click here to download ENSONIG00000000277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000000277's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000000277	smg7	99	65.925	ENSG00000116698	SMG7	86	94.340	Homo_sapiens
ENSONIG00000000277	smg7	89	94.494	ENSAPOG00000009611	smg7	96	94.494	Acanthochromis_polyacanthus
ENSONIG00000000277	smg7	99	65.120	ENSAMEG00000002357	SMG7	99	65.523	Ailuropoda_melanoleuca
ENSONIG00000000277	smg7	97	86.781	ENSACIG00000015152	smg7	100	89.029	Amphilophus_citrinellus
ENSONIG00000000277	smg7	100	90.505	ENSAOCG00000013538	smg7	100	92.683	Amphiprion_ocellaris
ENSONIG00000000277	smg7	100	90.165	ENSAPEG00000007851	smg7	100	92.254	Amphiprion_percula
ENSONIG00000000277	smg7	100	89.757	ENSATEG00000006931	smg7	100	89.757	Anabas_testudineus
ENSONIG00000000277	smg7	99	64.414	ENSAPLG00000015811	SMG7	99	64.726	Anas_platyrhynchos
ENSONIG00000000277	smg7	99	63.011	ENSACAG00000014989	SMG7	99	62.602	Anolis_carolinensis
ENSONIG00000000277	smg7	99	65.579	ENSANAG00000028114	SMG7	84	94.194	Aotus_nancymaae
ENSONIG00000000277	smg7	100	98.773	ENSACLG00000022079	smg7	100	98.773	Astatotilapia_calliptera
ENSONIG00000000277	smg7	100	76.435	ENSAMXG00000020809	smg7	100	76.425	Astyanax_mexicanus
ENSONIG00000000277	smg7	99	66.267	ENSBTAG00000008003	SMG7	99	65.114	Bos_taurus
ENSONIG00000000277	smg7	99	65.497	ENSCJAG00000005135	SMG7	85	94.194	Callithrix_jacchus
ENSONIG00000000277	smg7	99	61.787	ENSCAFG00000013276	SMG7	97	61.519	Canis_familiaris
ENSONIG00000000277	smg7	99	65.188	ENSCAFG00020015475	SMG7	89	90.244	Canis_lupus_dingo
ENSONIG00000000277	smg7	100	62.376	ENSCHIG00000018192	SMG7	99	61.388	Capra_hircus
ENSONIG00000000277	smg7	99	65.839	ENSTSYG00000002667	SMG7	80	94.194	Carlito_syrichta
ENSONIG00000000277	smg7	99	61.869	ENSCPOG00000008906	SMG7	99	61.079	Cavia_porcellus
ENSONIG00000000277	smg7	99	65.751	ENSCCAG00000028596	SMG7	84	94.194	Cebus_capucinus
ENSONIG00000000277	smg7	99	66.096	ENSCATG00000011063	SMG7	84	94.194	Cercocebus_atys
ENSONIG00000000277	smg7	99	65.839	ENSCLAG00000010751	SMG7	99	64.776	Chinchilla_lanigera
ENSONIG00000000277	smg7	99	62.325	ENSCSAG00000012654	SMG7	97	61.406	Chlorocebus_sabaeus
ENSONIG00000000277	smg7	92	57.524	ENSCHOG00000010522	SMG7	93	57.168	Choloepus_hoffmanni
ENSONIG00000000277	smg7	99	66.525	ENSCPBG00000015724	SMG7	99	65.541	Chrysemys_picta_bellii
ENSONIG00000000277	smg7	99	65.981	ENSCANG00000015680	SMG7	84	94.194	Colobus_angolensis_palliatus
ENSONIG00000000277	smg7	99	64.902	ENSCGRG00001013705	Smg7	99	64.298	Cricetulus_griseus_chok1gshd
ENSONIG00000000277	smg7	99	64.751	ENSCGRG00000018401	Smg7	100	64.146	Cricetulus_griseus_crigri
ENSONIG00000000277	smg7	99	81.261	ENSCVAG00000011842	smg7	100	81.659	Cyprinodon_variegatus
ENSONIG00000000277	smg7	100	75.910	ENSDARG00000060767	smg7	100	76.248	Danio_rerio
ENSONIG00000000277	smg7	99	62.055	ENSDORG00000007331	Smg7	99	60.902	Dipodomys_ordii
ENSONIG00000000277	smg7	96	60.940	ENSETEG00000002654	SMG7	99	60.270	Echinops_telfairi
ENSONIG00000000277	smg7	99	62.531	ENSEASG00005006524	SMG7	99	62.366	Equus_asinus_asinus
ENSONIG00000000277	smg7	93	88.358	ENSECAG00000004313	SMG7	97	88.131	Equus_caballus
ENSONIG00000000277	smg7	96	61.144	ENSEEUG00000002024	SMG7	94	60.473	Erinaceus_europaeus
ENSONIG00000000277	smg7	100	74.835	ENSELUG00000010293	smg7	99	77.660	Esox_lucius
ENSONIG00000000277	smg7	99	63.863	ENSFCAG00000010900	SMG7	99	64.058	Felis_catus
ENSONIG00000000277	smg7	99	61.153	ENSFALG00000003047	SMG7	100	61.571	Ficedula_albicollis
ENSONIG00000000277	smg7	99	62.138	ENSFDAG00000012121	SMG7	99	60.779	Fukomys_damarensis
ENSONIG00000000277	smg7	100	82.594	ENSFHEG00000011073	smg7	100	82.480	Fundulus_heteroclitus
ENSONIG00000000277	smg7	88	81.015	ENSGMOG00000004916	smg7	91	81.015	Gadus_morhua
ENSONIG00000000277	smg7	99	64.505	ENSGALG00000004667	SMG7	99	65.358	Gallus_gallus
ENSONIG00000000277	smg7	100	82.087	ENSGAFG00000019000	smg7	100	82.093	Gambusia_affinis
ENSONIG00000000277	smg7	97	81.973	ENSGACG00000001634	smg7	99	82.152	Gasterosteus_aculeatus
ENSONIG00000000277	smg7	99	66.182	ENSGGOG00000002342	SMG7	82	91.875	Gorilla_gorilla
ENSONIG00000000277	smg7	98	98.118	ENSHBUG00000003726	smg7	99	98.118	Haplochromis_burtoni
ENSONIG00000000277	smg7	99	66.012	ENSHGLG00000009353	SMG7	99	64.945	Heterocephalus_glaber_female
ENSONIG00000000277	smg7	99	56.694	ENSHGLG00100004878	-	99	56.410	Heterocephalus_glaber_male
ENSONIG00000000277	smg7	99	65.927	ENSHGLG00100009637	-	99	64.860	Heterocephalus_glaber_male
ENSONIG00000000277	smg7	100	75.937	ENSIPUG00000016997	smg7	100	76.460	Ictalurus_punctatus
ENSONIG00000000277	smg7	99	64.660	ENSSTOG00000000401	SMG7	99	63.776	Ictidomys_tridecemlineatus
ENSONIG00000000277	smg7	99	62.158	ENSJJAG00000012351	Smg7	99	61.166	Jaculus_jaculus
ENSONIG00000000277	smg7	97	80.250	ENSKMAG00000004900	smg7	100	81.339	Kryptolebias_marmoratus
ENSONIG00000000277	smg7	52	79.397	ENSLBEG00000005220	-	75	79.397	Labrus_bergylta
ENSONIG00000000277	smg7	99	87.511	ENSLBEG00000002983	smg7	99	87.424	Labrus_bergylta
ENSONIG00000000277	smg7	99	67.766	ENSLACG00000000972	SMG7	99	67.963	Latimeria_chalumnae
ENSONIG00000000277	smg7	99	67.681	ENSLOCG00000002010	smg7	99	67.621	Lepisosteus_oculatus
ENSONIG00000000277	smg7	99	62.106	ENSLAFG00000008186	SMG7	99	61.020	Loxodonta_africana
ENSONIG00000000277	smg7	99	64.414	ENSMFAG00000031653	SMG7	84	94.194	Macaca_fascicularis
ENSONIG00000000277	smg7	99	65.154	ENSMMUG00000018458	SMG7	99	64.177	Macaca_mulatta
ENSONIG00000000277	smg7	99	66.096	ENSMNEG00000034798	SMG7	84	94.194	Macaca_nemestrina
ENSONIG00000000277	smg7	99	66.096	ENSMLEG00000037170	SMG7	99	65.114	Mandrillus_leucophaeus
ENSONIG00000000277	smg7	88	86.561	ENSMAMG00000018733	smg7	85	87.253	Mastacembelus_armatus
ENSONIG00000000277	smg7	100	98.598	ENSMZEG00005015247	smg7	100	98.598	Maylandia_zebra
ENSONIG00000000277	smg7	99	64.175	ENSMGAG00000001561	SMG7	99	64.469	Meleagris_gallopavo
ENSONIG00000000277	smg7	99	64.646	ENSMAUG00000019484	Smg7	99	63.959	Mesocricetus_auratus
ENSONIG00000000277	smg7	99	65.983	ENSMICG00000007145	SMG7	81	94.194	Microcebus_murinus
ENSONIG00000000277	smg7	99	64.987	ENSMOCG00000020748	Smg7	99	63.844	Microtus_ochrogaster
ENSONIG00000000277	smg7	99	81.984	ENSMMOG00000001524	smg7	99	82.348	Mola_mola
ENSONIG00000000277	smg7	91	65.581	ENSMODG00000007139	SMG7	99	64.430	Monodelphis_domestica
ENSONIG00000000277	smg7	100	88.014	ENSMALG00000000061	smg7	93	89.151	Monopterus_albus
ENSONIG00000000277	smg7	99	65.500	MGP_CAROLIEiJ_G0014704	Smg7	99	64.377	Mus_caroli
ENSONIG00000000277	smg7	99	64.816	ENSMUSG00000042772	Smg7	99	64.129	Mus_musculus
ENSONIG00000000277	smg7	99	65.128	MGP_PahariEiJ_G0027940	Smg7	99	64.437	Mus_pahari
ENSONIG00000000277	smg7	99	64.902	MGP_SPRETEiJ_G0015511	Smg7	99	64.213	Mus_spretus
ENSONIG00000000277	smg7	98	61.642	ENSMPUG00000011732	SMG7	97	61.558	Mustela_putorius_furo
ENSONIG00000000277	smg7	99	61.774	ENSMLUG00000015417	SMG7	99	61.052	Myotis_lucifugus
ENSONIG00000000277	smg7	100	65.247	ENSNGAG00000009836	Smg7	100	65.162	Nannospalax_galili
ENSONIG00000000277	smg7	98	90.328	ENSNBRG00000024343	smg7	99	90.151	Neolamprologus_brichardi
ENSONIG00000000277	smg7	99	66.096	ENSNLEG00000018018	SMG7	99	65.114	Nomascus_leucogenys
ENSONIG00000000277	smg7	70	65.341	ENSMEUG00000004681	SMG7	73	65.341	Notamacropus_eugenii
ENSONIG00000000277	smg7	96	58.196	ENSOPRG00000013942	SMG7	96	57.976	Ochotona_princeps
ENSONIG00000000277	smg7	99	65.582	ENSODEG00000010390	SMG7	99	64.691	Octodon_degus
ENSONIG00000000277	smg7	99	61.404	ENSOANG00000000994	SMG7	100	61.320	Ornithorhynchus_anatinus
ENSONIG00000000277	smg7	99	59.635	ENSOCUG00000005887	SMG7	92	59.587	Oryctolagus_cuniculus
ENSONIG00000000277	smg7	100	80.123	ENSORLG00000007314	smg7	100	80.736	Oryzias_latipes
ENSONIG00000000277	smg7	100	80.560	ENSORLG00020015779	smg7	100	81.173	Oryzias_latipes_hni
ENSONIG00000000277	smg7	100	80.823	ENSORLG00015012289	smg7	100	80.998	Oryzias_latipes_hsok
ENSONIG00000000277	smg7	100	77.246	ENSOMEG00000002328	smg7	100	78.086	Oryzias_melastigma
ENSONIG00000000277	smg7	96	61.045	ENSOGAG00000003107	SMG7	93	60.751	Otolemur_garnettii
ENSONIG00000000277	smg7	99	64.957	ENSOARG00000001352	SMG7	100	63.801	Ovis_aries
ENSONIG00000000277	smg7	99	66.096	ENSPPAG00000031619	SMG7	89	90.798	Pan_paniscus
ENSONIG00000000277	smg7	99	65.638	ENSPPRG00000011222	SMG7	99	66.039	Panthera_pardus
ENSONIG00000000277	smg7	96	62.351	ENSPTIG00000007242	SMG7	100	62.585	Panthera_tigris_altaica
ENSONIG00000000277	smg7	99	66.096	ENSPTRG00000001764	SMG7	84	94.194	Pan_troglodytes
ENSONIG00000000277	smg7	99	66.096	ENSPANG00000004520	SMG7	99	65.114	Papio_anubis
ENSONIG00000000277	smg7	99	69.204	ENSPKIG00000007242	smg7	99	69.379	Paramormyrops_kingsleyae
ENSONIG00000000277	smg7	99	65.628	ENSPSIG00000012201	SMG7	100	64.555	Pelodiscus_sinensis
ENSONIG00000000277	smg7	71	49.761	ENSPMGG00000021833	smg7	97	49.821	Periophthalmus_magnuspinnatus
ENSONIG00000000277	smg7	99	64.711	ENSPEMG00000011315	Smg7	99	63.652	Peromyscus_maniculatus_bairdii
ENSONIG00000000277	smg7	99	65.925	ENSPCIG00000003786	SMG7	89	93.750	Phascolarctos_cinereus
ENSONIG00000000277	smg7	100	79.299	ENSPFOG00000019219	smg7	100	79.333	Poecilia_formosa
ENSONIG00000000277	smg7	100	82.681	ENSPLAG00000001446	smg7	100	82.711	Poecilia_latipinna
ENSONIG00000000277	smg7	97	82.194	ENSPMEG00000005218	smg7	99	82.226	Poecilia_mexicana
ENSONIG00000000277	smg7	87	78.858	ENSPREG00000019039	smg7	91	79.079	Poecilia_reticulata
ENSONIG00000000277	smg7	99	66.096	ENSPPYG00000000427	SMG7	99	65.114	Pongo_abelii
ENSONIG00000000277	smg7	83	72.648	ENSPCAG00000008360	SMG7	86	72.648	Procavia_capensis
ENSONIG00000000277	smg7	99	64.979	ENSPCOG00000011996	SMG7	76	94.194	Propithecus_coquereli
ENSONIG00000000277	smg7	91	58.094	ENSPVAG00000000851	SMG7	89	58.094	Pteropus_vampyrus
ENSONIG00000000277	smg7	100	98.335	ENSPNYG00000007643	smg7	100	98.335	Pundamilia_nyererei
ENSONIG00000000277	smg7	100	75.563	ENSPNAG00000011374	smg7	100	75.904	Pygocentrus_nattereri
ENSONIG00000000277	smg7	99	65.243	ENSRNOG00000027962	Smg7	99	64.770	Rattus_norvegicus
ENSONIG00000000277	smg7	99	66.096	ENSRBIG00000036316	SMG7	99	65.114	Rhinopithecus_bieti
ENSONIG00000000277	smg7	99	66.096	ENSRROG00000035719	SMG7	99	65.114	Rhinopithecus_roxellana
ENSONIG00000000277	smg7	99	64.230	ENSSBOG00000023454	SMG7	86	94.340	Saimiri_boliviensis_boliviensis
ENSONIG00000000277	smg7	99	65.579	ENSSHAG00000013147	SMG7	99	64.492	Sarcophilus_harrisii
ENSONIG00000000277	smg7	100	73.917	ENSSFOG00015017252	smg7	100	73.517	Scleropages_formosus
ENSONIG00000000277	smg7	100	84.676	ENSSMAG00000006067	smg7	100	86.038	Scophthalmus_maximus
ENSONIG00000000277	smg7	63	96.138	ENSSDUG00000017543	smg7	100	90.901	Seriola_dumerili
ENSONIG00000000277	smg7	99	65.299	ENSSPUG00000002064	SMG7	99	64.243	Sphenodon_punctatus
ENSONIG00000000277	smg7	99	87.511	ENSSPAG00000008733	smg7	99	88.317	Stegastes_partitus
ENSONIG00000000277	smg7	99	64.549	ENSSSCG00000015558	SMG7	99	63.946	Sus_scrofa
ENSONIG00000000277	smg7	99	64.469	ENSTGUG00000003928	SMG7	100	65.154	Taeniopygia_guttata
ENSONIG00000000277	smg7	100	71.664	ENSTNIG00000002802	smg7	100	71.417	Tetraodon_nigroviridis
ENSONIG00000000277	smg7	76	68.000	ENSTBEG00000003220	SMG7	70	68.000	Tupaia_belangeri
ENSONIG00000000277	smg7	96	61.301	ENSTTRG00000014778	SMG7	94	60.645	Tursiops_truncatus
ENSONIG00000000277	smg7	96	63.289	ENSUAMG00000017473	SMG7	100	63.709	Ursus_americanus
ENSONIG00000000277	smg7	96	63.289	ENSUMAG00000016389	SMG7	100	63.709	Ursus_maritimus
ENSONIG00000000277	smg7	99	63.941	ENSVVUG00000008976	SMG7	99	64.347	Vulpes_vulpes
ENSONIG00000000277	smg7	99	60.338	ENSXETG00000012528	smg7	99	60.406	Xenopus_tropicalis
ENSONIG00000000277	smg7	100	82.317	ENSXMAG00000007123	smg7	100	82.261	Xiphophorus_maculatus