EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000000393 (Gene tree)
Gene ID: -
Gene Symbol: chd6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 44503 bases
Position: chrGL831191.1:1169370-1213872
Accession: ZDB-GENE-130530-559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000000497	ResIII	PF04851.15	5.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000000496	-	7920	-	ENSONIP00000000497	2640 (aa)	-	I3IV57

Gene Model

Click here to download ENSONIG00000000393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000000393's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000000393	chd6	67	66.242	ENSONIG00000002816	chd9	76	66.242
ENSONIG00000000393	chd6	55	61.080	ENSONIG00000015569	chd8	62	61.565
ENSONIG00000000393	chd6	77	64.512	ENSONIG00000016614	chd7	74	62.654

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000000393	chd6	88	73.585	ENSG00000124177	CHD6	99	81.081	Homo_sapiens
ENSONIG00000000393	chd6	99	86.478	ENSAPOG00000013736	chd6	85	86.478	Acanthochromis_polyacanthus
ENSONIG00000000393	chd6	88	75.000	ENSAMEG00000009496	CHD6	84	75.000	Ailuropoda_melanoleuca
ENSONIG00000000393	chd6	95	93.057	ENSATEG00000005608	chd6	81	93.057	Anabas_testudineus
ENSONIG00000000393	chd6	82	75.632	ENSAPLG00000015592	CHD6	80	75.676	Anas_platyrhynchos
ENSONIG00000000393	chd6	79	72.150	ENSACAG00000006842	CHD6	80	69.612	Anolis_carolinensis
ENSONIG00000000393	chd6	85	73.592	ENSANAG00000037548	CHD6	99	81.502	Aotus_nancymaae
ENSONIG00000000393	chd6	84	77.842	ENSAMXG00000009576	chd6	77	78.281	Astyanax_mexicanus
ENSONIG00000000393	chd6	85	75.663	ENSBTAG00000005733	CHD6	82	75.599	Bos_taurus
ENSONIG00000000393	chd6	85	73.529	ENSCJAG00000017920	CHD6	99	81.319	Callithrix_jacchus
ENSONIG00000000393	chd6	85	74.872	ENSCAFG00000009236	CHD6	83	74.872	Canis_familiaris
ENSONIG00000000393	chd6	85	74.617	ENSCAFG00020012906	CHD6	95	84.008	Canis_lupus_dingo
ENSONIG00000000393	chd6	86	74.554	ENSCHIG00000017606	CHD6	82	74.490	Capra_hircus
ENSONIG00000000393	chd6	75	76.862	ENSTSYG00000014635	CHD6	86	76.862	Carlito_syrichta
ENSONIG00000000393	chd6	81	74.646	ENSCPOG00000015641	CHD6	81	74.936	Cavia_porcellus
ENSONIG00000000393	chd6	85	73.655	ENSCCAG00000036828	CHD6	99	81.502	Cebus_capucinus
ENSONIG00000000393	chd6	87	73.404	ENSCATG00000039248	CHD6	99	81.502	Cercocebus_atys
ENSONIG00000000393	chd6	83	75.581	ENSCLAG00000013743	CHD6	81	75.581	Chinchilla_lanigera
ENSONIG00000000393	chd6	87	73.648	ENSCSAG00000013997	CHD6	84	74.183	Chlorocebus_sabaeus
ENSONIG00000000393	chd6	70	73.770	ENSCHOG00000012647	CHD6	72	70.538	Choloepus_hoffmanni
ENSONIG00000000393	chd6	81	78.237	ENSCPBG00000019382	CHD6	82	75.561	Chrysemys_picta_bellii
ENSONIG00000000393	chd6	87	73.585	ENSCANG00000043435	CHD6	99	81.502	Colobus_angolensis_palliatus
ENSONIG00000000393	chd6	84	74.416	ENSCGRG00001002694	Chd6	83	74.439	Cricetulus_griseus_chok1gshd
ENSONIG00000000393	chd6	82	81.290	ENSDARG00000017244	chd6	76	80.880	Danio_rerio
ENSONIG00000000393	chd6	85	74.317	ENSDNOG00000004176	CHD6	84	75.032	Dasypus_novemcinctus
ENSONIG00000000393	chd6	85	74.681	ENSEASG00005023433	CHD6	95	85.549	Equus_asinus_asinus
ENSONIG00000000393	chd6	82	74.936	ENSECAG00000011761	CHD6	85	74.936	Equus_caballus
ENSONIG00000000393	chd6	74	85.057	ENSELUG00000012309	chd6	91	85.057	Esox_lucius
ENSONIG00000000393	chd6	86	74.793	ENSFCAG00000003572	CHD6	82	74.793	Felis_catus
ENSONIG00000000393	chd6	82	75.730	ENSFALG00000012563	CHD6	79	75.709	Ficedula_albicollis
ENSONIG00000000393	chd6	83	74.903	ENSFDAG00000013791	CHD6	82	75.517	Fukomys_damarensis
ENSONIG00000000393	chd6	78	80.157	ENSGMOG00000011715	chd6	91	77.205	Gadus_morhua
ENSONIG00000000393	chd6	88	84.555	ENSGACG00000000037	chd6	93	84.340	Gasterosteus_aculeatus
ENSONIG00000000393	chd6	88	73.585	ENSGGOG00000013123	CHD6	99	81.502	Gorilla_gorilla
ENSONIG00000000393	chd6	99	88.330	ENSHBUG00000014701	chd6	85	94.737	Haplochromis_burtoni
ENSONIG00000000393	chd6	81	75.517	ENSHGLG00000004548	CHD6	82	75.517	Heterocephalus_glaber_female
ENSONIG00000000393	chd6	81	75.517	ENSHGLG00100006401	CHD6	82	75.517	Heterocephalus_glaber_male
ENSONIG00000000393	chd6	84	80.943	ENSIPUG00000003692	chd6	74	84.497	Ictalurus_punctatus
ENSONIG00000000393	chd6	83	75.291	ENSSTOG00000013382	CHD6	82	75.904	Ictidomys_tridecemlineatus
ENSONIG00000000393	chd6	80	75.714	ENSLACG00000010881	CHD6	77	75.875	Latimeria_chalumnae
ENSONIG00000000393	chd6	74	84.078	ENSLOCG00000007386	chd6	78	80.797	Lepisosteus_oculatus
ENSONIG00000000393	chd6	88	73.517	ENSLAFG00000012144	CHD6	84	75.679	Loxodonta_africana
ENSONIG00000000393	chd6	87	73.585	ENSMFAG00000032830	CHD6	99	81.502	Macaca_fascicularis
ENSONIG00000000393	chd6	87	73.585	ENSMMUG00000020458	CHD6	99	81.502	Macaca_mulatta
ENSONIG00000000393	chd6	87	73.585	ENSMNEG00000040847	CHD6	99	81.502	Macaca_nemestrina
ENSONIG00000000393	chd6	87	73.585	ENSMLEG00000031965	CHD6	99	81.502	Mandrillus_leucophaeus
ENSONIG00000000393	chd6	95	92.657	ENSMAMG00000013111	chd6	81	92.724	Mastacembelus_armatus
ENSONIG00000000393	chd6	83	73.924	ENSMGAG00000001121	CHD6	82	74.171	Meleagris_gallopavo
ENSONIG00000000393	chd6	87	74.441	ENSMICG00000016641	CHD6	99	81.319	Microcebus_murinus
ENSONIG00000000393	chd6	75	79.241	ENSMODG00000000720	-	84	79.241	Monodelphis_domestica
ENSONIG00000000393	chd6	84	74.430	MGP_CAROLIEiJ_G0024604	Chd6	91	80.092	Mus_caroli
ENSONIG00000000393	chd6	84	74.494	ENSMUSG00000057133	Chd6	91	80.183	Mus_musculus
ENSONIG00000000393	chd6	84	74.114	MGP_PahariEiJ_G0026048	Chd6	91	80.092	Mus_pahari
ENSONIG00000000393	chd6	84	74.494	MGP_SPRETEiJ_G0025526	Chd6	91	80.183	Mus_spretus
ENSONIG00000000393	chd6	85	74.698	ENSMPUG00000017695	CHD6	84	74.698	Mustela_putorius_furo
ENSONIG00000000393	chd6	84	74.362	ENSMLUG00000016247	CHD6	82	74.362	Myotis_lucifugus
ENSONIG00000000393	chd6	86	91.381	ENSNBRG00000013839	chd6	83	91.381	Neolamprologus_brichardi
ENSONIG00000000393	chd6	88	72.264	ENSNLEG00000006496	CHD6	85	72.802	Nomascus_leucogenys
ENSONIG00000000393	chd6	87	71.092	ENSOPRG00000013376	-	84	71.092	Ochotona_princeps
ENSONIG00000000393	chd6	74	73.633	ENSOANG00000014347	CHD6	71	74.384	Ornithorhynchus_anatinus
ENSONIG00000000393	chd6	85	73.971	ENSOCUG00000012394	CHD6	83	74.447	Oryctolagus_cuniculus
ENSONIG00000000393	chd6	91	88.585	ENSORLG00020021891	chd6	95	94.389	Oryzias_latipes_hni
ENSONIG00000000393	chd6	82	75.388	ENSOGAG00000002427	CHD6	81	75.226	Otolemur_garnettii
ENSONIG00000000393	chd6	86	73.406	ENSOARG00000002597	CHD6	82	73.342	Ovis_aries
ENSONIG00000000393	chd6	87	74.856	ENSPPRG00000014756	CHD6	84	74.856	Panthera_pardus
ENSONIG00000000393	chd6	87	74.665	ENSPTIG00000011094	CHD6	84	74.665	Panthera_tigris_altaica
ENSONIG00000000393	chd6	88	73.585	ENSPTRG00000013504	CHD6	99	81.502	Pan_troglodytes
ENSONIG00000000393	chd6	87	73.585	ENSPANG00000025554	CHD6	99	81.502	Papio_anubis
ENSONIG00000000393	chd6	76	84.610	ENSPKIG00000005578	chd6	75	80.888	Paramormyrops_kingsleyae
ENSONIG00000000393	chd6	87	86.477	ENSPMGG00000014877	chd6	96	86.477	Periophthalmus_magnuspinnatus
ENSONIG00000000393	chd6	83	75.326	ENSPCIG00000028037	CHD6	81	75.420	Phascolarctos_cinereus
ENSONIG00000000393	chd6	96	83.750	ENSPLAG00000003128	chd6	81	89.345	Poecilia_latipinna
ENSONIG00000000393	chd6	92	89.153	ENSPREG00000022653	chd6	99	95.055	Poecilia_reticulata
ENSONIG00000000393	chd6	88	73.585	ENSPPYG00000011016	CHD6	85	74.121	Pongo_abelii
ENSONIG00000000393	chd6	84	74.377	ENSPCOG00000001089	CHD6	99	81.502	Propithecus_coquereli
ENSONIG00000000393	chd6	85	92.728	ENSPNYG00000022516	chd6	83	92.986	Pundamilia_nyererei
ENSONIG00000000393	chd6	84	78.761	ENSPNAG00000012825	chd6	79	79.537	Pygocentrus_nattereri
ENSONIG00000000393	chd6	82	74.161	ENSRNOG00000016744	Chd6	81	74.262	Rattus_norvegicus
ENSONIG00000000393	chd6	85	73.717	ENSSBOG00000022089	CHD6	99	81.502	Saimiri_boliviensis_boliviensis
ENSONIG00000000393	chd6	83	74.935	ENSSHAG00000017072	CHD6	82	74.744	Sarcophilus_harrisii
ENSONIG00000000393	chd6	84	79.779	ENSSFOG00015012920	chd6	80	80.065	Scleropages_formosus
ENSONIG00000000393	chd6	56	92.105	ENSSARG00000002615	-	57	92.105	Sorex_araneus
ENSONIG00000000393	chd6	86	74.745	ENSSSCG00000007360	CHD6	83	74.745	Sus_scrofa
ENSONIG00000000393	chd6	82	76.034	ENSTGUG00000003179	CHD6	83	75.531	Taeniopygia_guttata
ENSONIG00000000393	chd6	83	88.685	ENSTNIG00000017487	chd6	91	87.674	Tetraodon_nigroviridis
ENSONIG00000000393	chd6	86	72.524	ENSTTRG00000013438	CHD6	82	72.460	Tursiops_truncatus
ENSONIG00000000393	chd6	86	73.214	ENSUAMG00000024036	CHD6	95	84.008	Ursus_americanus
ENSONIG00000000393	chd6	86	74.936	ENSUMAG00000002017	CHD6	95	84.008	Ursus_maritimus
ENSONIG00000000393	chd6	76	70.830	ENSVPAG00000007941	CHD6	73	70.830	Vicugna_pacos
ENSONIG00000000393	chd6	86	74.872	ENSVVUG00000029164	CHD6	83	74.872	Vulpes_vulpes
ENSONIG00000000393	chd6	78	71.368	ENSXETG00000021445	chd6	79	68.134	Xenopus_tropicalis