EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000000400 (Gene tree)
Gene ID: 100710345
Gene Symbol: trmt1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 19746 bases
Position: chrGL831280.1:1935024-1954769
Accession: 100710345
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000000505	zf-CCCH	PF00642.24	3.2e-05	1	1
ENSONIP00000000506	TRM	PF02005.16	1.6e-139	1	1
ENSONIP00000000505	TRM	PF02005.16	2e-139	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000000505	-	1851	-	ENSONIP00000000506	617 (aa)	-	I3IV66
ENSONIT00000000504	-	6184	-	ENSONIP00000000505	659 (aa)	XP_005458745	I3IV65

Gene Model

Click here to download ENSONIG00000000400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000000400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000000400	trmt1	99	64.800	ENSG00000104907	TRMT1	100	73.958	Homo_sapiens
ENSONIG00000000400	trmt1	99	64.103	ENSAMEG00000012598	TRMT1	92	64.103	Ailuropoda_melanoleuca
ENSONIG00000000400	trmt1	96	83.388	ENSACIG00000018680	trmt1	97	84.653	Amphilophus_citrinellus
ENSONIG00000000400	trmt1	100	87.462	ENSAOCG00000006781	trmt1	100	87.462	Amphiprion_ocellaris
ENSONIG00000000400	trmt1	100	87.462	ENSAPEG00000007712	trmt1	100	87.462	Amphiprion_percula
ENSONIG00000000400	trmt1	100	85.224	ENSATEG00000001872	trmt1	100	85.224	Anabas_testudineus
ENSONIG00000000400	trmt1	93	67.354	ENSACAG00000003825	TRMT1	94	67.820	Anolis_carolinensis
ENSONIG00000000400	trmt1	99	62.540	ENSANAG00000023016	TRMT1	94	65.417	Aotus_nancymaae
ENSONIG00000000400	trmt1	99	88.694	ENSACLG00000010073	trmt1	98	92.462	Astatotilapia_calliptera
ENSONIG00000000400	trmt1	91	82.250	ENSAMXG00000012026	trmt1	94	77.564	Astyanax_mexicanus
ENSONIG00000000400	trmt1	99	64.423	ENSBTAG00000019325	TRMT1	88	64.423	Bos_taurus
ENSONIG00000000400	trmt1	85	40.223	WBGene00006613	trm-1	96	40.223	Caenorhabditis_elegans
ENSONIG00000000400	trmt1	99	62.440	ENSCJAG00000004566	TRMT1	95	62.440	Callithrix_jacchus
ENSONIG00000000400	trmt1	99	64.904	ENSCAFG00000017070	TRMT1	94	66.223	Canis_familiaris
ENSONIG00000000400	trmt1	99	64.687	ENSCAFG00020005397	TRMT1	89	67.354	Canis_lupus_dingo
ENSONIG00000000400	trmt1	100	64.444	ENSCHIG00000013569	TRMT1	94	64.444	Capra_hircus
ENSONIG00000000400	trmt1	99	62.058	ENSTSYG00000003207	TRMT1	94	62.058	Carlito_syrichta
ENSONIG00000000400	trmt1	85	62.664	ENSCAPG00000003355	TRMT1	94	62.664	Cavia_aperea
ENSONIG00000000400	trmt1	99	62.720	ENSCPOG00000011754	TRMT1	94	62.720	Cavia_porcellus
ENSONIG00000000400	trmt1	96	62.914	ENSCCAG00000022263	TRMT1	95	64.055	Cebus_capucinus
ENSONIG00000000400	trmt1	82	57.543	ENSCATG00000038220	-	92	57.234	Cercocebus_atys
ENSONIG00000000400	trmt1	99	64.734	ENSCATG00000039850	TRMT1	94	64.734	Cercocebus_atys
ENSONIG00000000400	trmt1	99	64.516	ENSCLAG00000015295	TRMT1	94	63.123	Chinchilla_lanigera
ENSONIG00000000400	trmt1	84	66.603	ENSCSAG00000006500	TRMT1	98	66.603	Chlorocebus_sabaeus
ENSONIG00000000400	trmt1	91	71.150	ENSCPBG00000023866	TRMT1	94	66.242	Chrysemys_picta_bellii
ENSONIG00000000400	trmt1	87	48.897	ENSCING00000002884	-	97	48.897	Ciona_intestinalis
ENSONIG00000000400	trmt1	87	50.554	ENSCSAVG00000010927	-	100	49.074	Ciona_savignyi
ENSONIG00000000400	trmt1	88	54.083	ENSCANG00000031650	-	91	52.586	Colobus_angolensis_palliatus
ENSONIG00000000400	trmt1	96	52.640	ENSCANG00000040631	TRMT1	92	52.640	Colobus_angolensis_palliatus
ENSONIG00000000400	trmt1	96	64.833	ENSCGRG00001022594	Trmt1	92	64.833	Cricetulus_griseus_chok1gshd
ENSONIG00000000400	trmt1	96	64.833	ENSCGRG00000017732	Trmt1	90	64.833	Cricetulus_griseus_crigri
ENSONIG00000000400	trmt1	96	83.953	ENSCSEG00000001643	trmt1	100	78.475	Cynoglossus_semilaevis
ENSONIG00000000400	trmt1	100	82.451	ENSCVAG00000011886	trmt1	100	82.451	Cyprinodon_variegatus
ENSONIG00000000400	trmt1	91	79.407	ENSDARG00000010978	trmt1	91	77.362	Danio_rerio
ENSONIG00000000400	trmt1	83	46.053	ENSDNOG00000048240	-	89	46.095	Dasypus_novemcinctus
ENSONIG00000000400	trmt1	95	64.478	ENSDORG00000014298	Trmt1	90	64.478	Dipodomys_ordii
ENSONIG00000000400	trmt1	89	46.643	FBgn0032430	CG6388	95	46.760	Drosophila_melanogaster
ENSONIG00000000400	trmt1	85	50.951	ENSEBUG00000003449	trmt1	75	52.632	Eptatretus_burgeri
ENSONIG00000000400	trmt1	95	65.829	ENSEASG00005004050	TRMT1	94	65.829	Equus_asinus_asinus
ENSONIG00000000400	trmt1	95	65.829	ENSECAG00000016149	TRMT1	94	65.829	Equus_caballus
ENSONIG00000000400	trmt1	53	73.705	ENSEEUG00000014102	-	84	73.705	Erinaceus_europaeus
ENSONIG00000000400	trmt1	98	72.998	ENSELUG00000021659	trmt1	99	71.302	Esox_lucius
ENSONIG00000000400	trmt1	99	63.680	ENSFCAG00000000483	TRMT1	94	63.680	Felis_catus
ENSONIG00000000400	trmt1	99	63.768	ENSFDAG00000007386	TRMT1	94	63.768	Fukomys_damarensis
ENSONIG00000000400	trmt1	88	85.688	ENSFHEG00000012865	trmt1	100	82.529	Fundulus_heteroclitus
ENSONIG00000000400	trmt1	91	74.245	ENSGMOG00000006564	trmt1	99	74.868	Gadus_morhua
ENSONIG00000000400	trmt1	99	85.597	ENSGAFG00000011862	trmt1	100	83.005	Gambusia_affinis
ENSONIG00000000400	trmt1	99	79.153	ENSGACG00000000227	trmt1	97	81.773	Gasterosteus_aculeatus
ENSONIG00000000400	trmt1	98	66.457	ENSGAGG00000016432	TRMT1	94	66.457	Gopherus_agassizii
ENSONIG00000000400	trmt1	99	64.960	ENSGGOG00000014007	TRMT1	95	64.960	Gorilla_gorilla
ENSONIG00000000400	trmt1	89	83.242	ENSHBUG00000008821	trmt1	92	83.242	Haplochromis_burtoni
ENSONIG00000000400	trmt1	99	63.607	ENSHGLG00000015972	TRMT1	94	63.607	Heterocephalus_glaber_female
ENSONIG00000000400	trmt1	99	59.646	ENSHGLG00100018112	TRMT1	94	59.646	Heterocephalus_glaber_male
ENSONIG00000000400	trmt1	100	76.480	ENSHCOG00000009447	trmt1	100	76.480	Hippocampus_comes
ENSONIG00000000400	trmt1	98	74.444	ENSIPUG00000002899	trmt1	92	74.882	Ictalurus_punctatus
ENSONIG00000000400	trmt1	99	63.360	ENSSTOG00000012531	TRMT1	92	64.580	Ictidomys_tridecemlineatus
ENSONIG00000000400	trmt1	94	65.372	ENSJJAG00000017154	Trmt1	91	64.628	Jaculus_jaculus
ENSONIG00000000400	trmt1	97	85.197	ENSKMAG00000011809	trmt1	98	86.301	Kryptolebias_marmoratus
ENSONIG00000000400	trmt1	100	81.371	ENSLBEG00000012703	trmt1	100	82.712	Labrus_bergylta
ENSONIG00000000400	trmt1	91	62.214	ENSLACG00000014585	TRMT1	94	62.347	Latimeria_chalumnae
ENSONIG00000000400	trmt1	91	71.936	ENSLOCG00000006479	trmt1	99	71.804	Lepisosteus_oculatus
ENSONIG00000000400	trmt1	99	64.573	ENSLAFG00000014072	TRMT1	95	64.573	Loxodonta_africana
ENSONIG00000000400	trmt1	99	64.734	ENSMFAG00000033143	TRMT1	94	64.734	Macaca_fascicularis
ENSONIG00000000400	trmt1	99	60.420	ENSMMUG00000001167	TRMT1	94	60.420	Macaca_mulatta
ENSONIG00000000400	trmt1	99	64.573	ENSMNEG00000037867	TRMT1	94	64.573	Macaca_nemestrina
ENSONIG00000000400	trmt1	99	64.734	ENSMLEG00000016142	TRMT1	94	64.734	Mandrillus_leucophaeus
ENSONIG00000000400	trmt1	99	84.940	ENSMAMG00000004357	trmt1	100	84.940	Mastacembelus_armatus
ENSONIG00000000400	trmt1	100	93.475	ENSMZEG00005014510	trmt1	100	93.475	Maylandia_zebra
ENSONIG00000000400	trmt1	99	63.768	ENSMAUG00000011134	Trmt1	93	63.768	Mesocricetus_auratus
ENSONIG00000000400	trmt1	99	64.583	ENSMICG00000000793	TRMT1	93	64.583	Microcebus_murinus
ENSONIG00000000400	trmt1	96	65.124	ENSMOCG00000015895	Trmt1	93	62.578	Microtus_ochrogaster
ENSONIG00000000400	trmt1	96	84.486	ENSMMOG00000011097	trmt1	99	83.279	Mola_mola
ENSONIG00000000400	trmt1	96	66.000	ENSMODG00000011619	TRMT1	97	66.000	Monodelphis_domestica
ENSONIG00000000400	trmt1	99	64.194	MGP_CAROLIEiJ_G0031304	Trmt1	98	60.156	Mus_caroli
ENSONIG00000000400	trmt1	96	65.672	ENSMUSG00000001909	Trmt1	98	60.156	Mus_musculus
ENSONIG00000000400	trmt1	96	65.672	MGP_SPRETEiJ_G0032422	Trmt1	98	59.766	Mus_spretus
ENSONIG00000000400	trmt1	99	64.960	ENSMPUG00000004210	TRMT1	89	64.960	Mustela_putorius_furo
ENSONIG00000000400	trmt1	96	66.721	ENSMLUG00000012809	TRMT1	90	66.721	Myotis_lucifugus
ENSONIG00000000400	trmt1	95	64.833	ENSNGAG00000022486	Trmt1	90	64.833	Nannospalax_galili
ENSONIG00000000400	trmt1	79	98.176	ENSNBRG00000024376	trmt1	87	97.647	Neolamprologus_brichardi
ENSONIG00000000400	trmt1	81	64.151	ENSNLEG00000013019	-	93	64.151	Nomascus_leucogenys
ENSONIG00000000400	trmt1	93	66.783	ENSMEUG00000013756	TRMT1	99	66.325	Notamacropus_eugenii
ENSONIG00000000400	trmt1	79	70.488	ENSOPRG00000009471	-	71	76.000	Ochotona_princeps
ENSONIG00000000400	trmt1	99	64.687	ENSODEG00000010323	TRMT1	94	64.687	Octodon_degus
ENSONIG00000000400	trmt1	85	66.730	ENSOCUG00000021934	TRMT1	99	66.856	Oryctolagus_cuniculus
ENSONIG00000000400	trmt1	97	80.421	ENSORLG00000020074	trmt1	98	81.190	Oryzias_latipes
ENSONIG00000000400	trmt1	97	84.615	ENSORLG00020007561	trmt1	97	84.416	Oryzias_latipes_hni
ENSONIG00000000400	trmt1	97	85.270	ENSORLG00015006547	trmt1	96	84.335	Oryzias_latipes_hsok
ENSONIG00000000400	trmt1	98	85.434	ENSOMEG00000019343	trmt1	96	84.810	Oryzias_melastigma
ENSONIG00000000400	trmt1	97	65.246	ENSOGAG00000025576	TRMT1	95	65.686	Otolemur_garnettii
ENSONIG00000000400	trmt1	100	52.057	ENSOARG00000009397	TRMT1	87	52.632	Ovis_aries
ENSONIG00000000400	trmt1	96	58.251	ENSPPRG00000012117	TRMT1	92	58.388	Panthera_pardus
ENSONIG00000000400	trmt1	73	63.975	ENSPTIG00000008833	TRMT1	88	63.975	Panthera_tigris_altaica
ENSONIG00000000400	trmt1	99	64.800	ENSPTRG00000010557	TRMT1	95	64.800	Pan_troglodytes
ENSONIG00000000400	trmt1	89	49.293	ENSPTRG00000050421	-	89	49.293	Pan_troglodytes
ENSONIG00000000400	trmt1	77	56.133	ENSPANG00000034058	-	84	56.133	Papio_anubis
ENSONIG00000000400	trmt1	99	64.734	ENSPANG00000009247	TRMT1	94	64.734	Papio_anubis
ENSONIG00000000400	trmt1	95	78.415	ENSPKIG00000005309	trmt1	99	71.964	Paramormyrops_kingsleyae
ENSONIG00000000400	trmt1	94	56.923	ENSPSIG00000008762	TRMT1	83	56.923	Pelodiscus_sinensis
ENSONIG00000000400	trmt1	94	84.041	ENSPMGG00000019764	trmt1	96	83.860	Periophthalmus_magnuspinnatus
ENSONIG00000000400	trmt1	96	65.289	ENSPEMG00000016247	Trmt1	91	65.289	Peromyscus_maniculatus_bairdii
ENSONIG00000000400	trmt1	99	60.870	ENSPMAG00000004329	trmt1	96	60.870	Petromyzon_marinus
ENSONIG00000000400	trmt1	96	66.007	ENSPCIG00000019273	TRMT1	95	64.856	Phascolarctos_cinereus
ENSONIG00000000400	trmt1	96	87.291	ENSPFOG00000008527	trmt1	100	83.156	Poecilia_formosa
ENSONIG00000000400	trmt1	96	85.953	ENSPLAG00000018788	trmt1	100	82.947	Poecilia_latipinna
ENSONIG00000000400	trmt1	96	86.723	ENSPMEG00000013120	trmt1	100	82.549	Poecilia_mexicana
ENSONIG00000000400	trmt1	96	84.874	ENSPREG00000000211	trmt1	96	82.083	Poecilia_reticulata
ENSONIG00000000400	trmt1	99	64.640	ENSPPYG00000009622	TRMT1	95	64.640	Pongo_abelii
ENSONIG00000000400	trmt1	99	59.968	ENSPCAG00000003698	TRMT1	95	59.968	Procavia_capensis
ENSONIG00000000400	trmt1	99	64.263	ENSPCOG00000008653	TRMT1	94	64.263	Propithecus_coquereli
ENSONIG00000000400	trmt1	99	63.738	ENSPVAG00000015076	TRMT1	94	63.738	Pteropus_vampyrus
ENSONIG00000000400	trmt1	91	92.185	ENSPNYG00000013960	trmt1	98	91.457	Pundamilia_nyererei
ENSONIG00000000400	trmt1	91	72.583	ENSPNAG00000024859	trmt1	99	67.559	Pygocentrus_nattereri
ENSONIG00000000400	trmt1	95	64.874	ENSRNOG00000002914	Trmt1	93	64.874	Rattus_norvegicus
ENSONIG00000000400	trmt1	99	65.217	ENSRBIG00000038324	TRMT1	94	65.217	Rhinopithecus_bieti
ENSONIG00000000400	trmt1	94	49.069	ENSRBIG00000037505	-	92	50.000	Rhinopithecus_bieti
ENSONIG00000000400	trmt1	99	65.217	ENSRROG00000028599	TRMT1	94	65.217	Rhinopithecus_roxellana
ENSONIG00000000400	trmt1	94	48.393	ENSRROG00000031847	-	91	49.315	Rhinopithecus_roxellana
ENSONIG00000000400	trmt1	82	38.390	YDR120C	-	92	38.476	Saccharomyces_cerevisiae
ENSONIG00000000400	trmt1	96	63.245	ENSSBOG00000028861	TRMT1	95	64.395	Saimiri_boliviensis_boliviensis
ENSONIG00000000400	trmt1	93	68.576	ENSSHAG00000014381	TRMT1	96	67.458	Sarcophilus_harrisii
ENSONIG00000000400	trmt1	91	81.239	ENSSFOG00015004139	trmt1	99	71.833	Scleropages_formosus
ENSONIG00000000400	trmt1	97	84.380	ENSSMAG00000021136	trmt1	100	80.735	Scophthalmus_maximus
ENSONIG00000000400	trmt1	100	86.119	ENSSDUG00000012740	trmt1	100	86.119	Seriola_dumerili
ENSONIG00000000400	trmt1	100	85.821	ENSSLDG00000005971	trmt1	100	85.821	Seriola_lalandi_dorsalis
ENSONIG00000000400	trmt1	91	63.186	ENSSARG00000005138	TRMT1	99	63.186	Sorex_araneus
ENSONIG00000000400	trmt1	96	52.667	ENSSPUG00000001084	TRMT1	97	51.948	Sphenodon_punctatus
ENSONIG00000000400	trmt1	100	85.650	ENSSPAG00000007153	trmt1	99	88.963	Stegastes_partitus
ENSONIG00000000400	trmt1	95	65.662	ENSSSCG00000013744	TRMT1	94	65.662	Sus_scrofa
ENSONIG00000000400	trmt1	89	82.679	ENSTRUG00000010700	trmt1	95	75.889	Takifugu_rubripes
ENSONIG00000000400	trmt1	91	87.057	ENSTNIG00000018808	trmt1	99	86.585	Tetraodon_nigroviridis
ENSONIG00000000400	trmt1	96	62.664	ENSTTRG00000006379	TRMT1	94	61.600	Tursiops_truncatus
ENSONIG00000000400	trmt1	95	66.221	ENSUAMG00000022911	TRMT1	93	65.997	Ursus_americanus
ENSONIG00000000400	trmt1	95	65.886	ENSUMAG00000006027	TRMT1	93	65.886	Ursus_maritimus
ENSONIG00000000400	trmt1	99	65.064	ENSVVUG00000024177	TRMT1	93	65.064	Vulpes_vulpes
ENSONIG00000000400	trmt1	75	71.429	ENSXETG00000033863	TRMT1	92	71.522	Xenopus_tropicalis
ENSONIG00000000400	trmt1	96	87.059	ENSXCOG00000015733	trmt1	100	83.156	Xiphophorus_couchianus
ENSONIG00000000400	trmt1	91	90.747	ENSXMAG00000013823	trmt1	99	90.052	Xiphophorus_maculatus