EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000000890 (Gene tree)
Gene ID: 100708691
Gene Symbol: arl5c
Alias: -
Full Name: ADP-ribosylation factor-like 5C
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 2018 bases
Position: chrGL831149.1:1404432-1406449
Accession: ZDB-GENE-040426-1866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000001126	MMR_HSR1	PF01926.23	5.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000001125	-	543	-	ENSONIP00000001126	180 (aa)	-	I3IWY6

Gene Model

Click here to download ENSONIG00000000890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000000890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000000890	arl5c	84	43.396	ENSONIG00000021291	-	79	43.396
ENSONIG00000000890	arl5c	63	30.508	ENSONIG00000016622	rab2a	55	30.508
ENSONIG00000000890	arl5c	86	32.051	ENSONIG00000014667	arl8a	81	32.051
ENSONIG00000000890	arl5c	84	44.304	ENSONIG00000020477	arl4aa	79	44.304
ENSONIG00000000890	arl5c	98	45.763	ENSONIG00000019062	arf3b	98	45.763
ENSONIG00000000890	arl5c	88	40.120	ENSONIG00000003403	ARL4D	83	40.120
ENSONIG00000000890	arl5c	92	41.212	ENSONIG00000013539	arl2	90	41.212
ENSONIG00000000890	arl5c	96	39.326	ENSONIG00000003098	ARL6	96	39.326
ENSONIG00000000890	arl5c	98	48.295	ENSONIG00000001286	-	98	48.295
ENSONIG00000000890	arl5c	84	41.139	ENSONIG00000021238	arl4d	79	41.139
ENSONIG00000000890	arl5c	97	72.000	ENSONIG00000006036	arl8	98	72.000
ENSONIG00000000890	arl5c	97	43.820	ENSONIG00000009921	arl1	98	43.820
ENSONIG00000000890	arl5c	98	46.591	ENSONIG00000009484	-	98	46.591
ENSONIG00000000890	arl5c	94	39.665	ENSONIG00000005124	arfrp1	89	39.665
ENSONIG00000000890	arl5c	84	43.709	ENSONIG00000000864	-	94	43.709
ENSONIG00000000890	arl5c	91	36.585	ENSONIG00000013045	arl3l2	88	36.585
ENSONIG00000000890	arl5c	98	70.455	ENSONIG00000017021	arl5a	98	70.455
ENSONIG00000000890	arl5c	62	30.172	ENSONIG00000009443	si:dkey-16l2.16	55	30.172
ENSONIG00000000890	arl5c	87	41.718	ENSONIG00000003641	-	69	41.718
ENSONIG00000000890	arl5c	99	37.838	ENSONIG00000021039	arl4ca	85	39.759
ENSONIG00000000890	arl5c	88	40.252	ENSONIG00000000203	-	87	40.252
ENSONIG00000000890	arl5c	98	41.011	ENSONIG00000004340	-	99	41.011
ENSONIG00000000890	arl5c	98	45.763	ENSONIG00000012147	-	98	45.763
ENSONIG00000000890	arl5c	82	44.295	ENSONIG00000017639	arl11	85	44.295
ENSONIG00000000890	arl5c	98	44.068	ENSONIG00000007594	arf5	98	44.068
ENSONIG00000000890	arl5c	82	40.523	ENSONIG00000009954	arl14	74	40.523
ENSONIG00000000890	arl5c	88	40.881	ENSONIG00000015815	arl3	85	40.881
ENSONIG00000000890	arl5c	98	37.688	ENSONIG00000004329	-	94	37.688
ENSONIG00000000890	arl5c	98	46.328	ENSONIG00000018115	arf2b	98	46.328
ENSONIG00000000890	arl5c	99	42.778	ENSONIG00000014890	-	100	42.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000000890	arl5c	99	89.385	ENSAPOG00000005821	arl5c	100	89.385	Acanthochromis_polyacanthus
ENSONIG00000000890	arl5c	91	98.171	ENSACIG00000008975	arl5c	91	98.171	Amphilophus_citrinellus
ENSONIG00000000890	arl5c	99	89.385	ENSAOCG00000010448	arl5c	100	89.385	Amphiprion_ocellaris
ENSONIG00000000890	arl5c	99	89.385	ENSAPEG00000002699	arl5c	100	89.385	Amphiprion_percula
ENSONIG00000000890	arl5c	99	87.151	ENSATEG00000000181	arl5c	100	87.151	Anabas_testudineus
ENSONIG00000000890	arl5c	100	99.444	ENSACLG00000000922	arl5c	100	99.441	Astatotilapia_calliptera
ENSONIG00000000890	arl5c	99	83.799	ENSAMXG00000031771	arl5c	100	83.799	Astyanax_mexicanus
ENSONIG00000000890	arl5c	99	82.682	ENSCSEG00000009845	arl5c	100	82.682	Cynoglossus_semilaevis
ENSONIG00000000890	arl5c	99	91.573	ENSCVAG00000012706	arl5c	99	91.573	Cyprinodon_variegatus
ENSONIG00000000890	arl5c	99	83.799	ENSDARG00000035719	arl5c	100	83.799	Danio_rerio
ENSONIG00000000890	arl5c	99	86.592	ENSELUG00000016864	arl5c	100	86.592	Esox_lucius
ENSONIG00000000890	arl5c	99	91.620	ENSFHEG00000013677	arl5c	100	91.620	Fundulus_heteroclitus
ENSONIG00000000890	arl5c	99	92.179	ENSGAFG00000002547	arl5c	100	92.179	Gambusia_affinis
ENSONIG00000000890	arl5c	100	90.000	ENSGACG00000009321	arl5c	100	90.503	Gasterosteus_aculeatus
ENSONIG00000000890	arl5c	99	99.441	ENSHBUG00000007301	arl5c	100	99.441	Haplochromis_burtoni
ENSONIG00000000890	arl5c	99	83.240	ENSHCOG00000017576	-	100	83.240	Hippocampus_comes
ENSONIG00000000890	arl5c	99	84.358	ENSIPUG00000023232	arl5c	100	84.358	Ictalurus_punctatus
ENSONIG00000000890	arl5c	99	89.944	ENSKMAG00000011323	arl5c	100	89.944	Kryptolebias_marmoratus
ENSONIG00000000890	arl5c	100	89.444	ENSLBEG00000006177	arl5c	87	89.444	Labrus_bergylta
ENSONIG00000000890	arl5c	99	87.709	ENSMAMG00000022157	arl5c	100	87.709	Mastacembelus_armatus
ENSONIG00000000890	arl5c	99	99.441	ENSMZEG00005022925	arl5c	100	99.441	Maylandia_zebra
ENSONIG00000000890	arl5c	91	94.512	ENSMMOG00000020851	arl5c	96	94.512	Mola_mola
ENSONIG00000000890	arl5c	91	89.634	ENSMALG00000009306	arl5c	93	89.634	Monopterus_albus
ENSONIG00000000890	arl5c	99	98.883	ENSNBRG00000020245	arl5c	100	98.883	Neolamprologus_brichardi
ENSONIG00000000890	arl5c	99	83.799	ENSORLG00000002960	arl5c	100	84.146	Oryzias_latipes
ENSONIG00000000890	arl5c	99	83.799	ENSORLG00020010074	arl5c	100	84.146	Oryzias_latipes_hni
ENSONIG00000000890	arl5c	99	83.799	ENSORLG00015002752	arl5c	100	84.146	Oryzias_latipes_hsok
ENSONIG00000000890	arl5c	96	85.549	ENSOMEG00000021718	arl5c	98	85.549	Oryzias_melastigma
ENSONIG00000000890	arl5c	99	86.034	ENSPKIG00000021727	arl5c	100	86.034	Paramormyrops_kingsleyae
ENSONIG00000000890	arl5c	99	93.296	ENSPFOG00000007842	arl5c	99	93.296	Poecilia_formosa
ENSONIG00000000890	arl5c	99	92.737	ENSPLAG00000002394	arl5c	100	92.737	Poecilia_latipinna
ENSONIG00000000890	arl5c	91	93.865	ENSPMEG00000000631	arl5c	94	93.865	Poecilia_mexicana
ENSONIG00000000890	arl5c	99	93.855	ENSPREG00000008730	arl5c	100	93.855	Poecilia_reticulata
ENSONIG00000000890	arl5c	99	99.441	ENSPNYG00000012720	arl5c	100	99.441	Pundamilia_nyererei
ENSONIG00000000890	arl5c	99	83.240	ENSPNAG00000002310	arl5c	100	83.240	Pygocentrus_nattereri
ENSONIG00000000890	arl5c	99	84.916	ENSSFOG00015023529	arl5c	100	84.916	Scleropages_formosus
ENSONIG00000000890	arl5c	99	89.385	ENSSMAG00000010552	arl5c	100	89.385	Scophthalmus_maximus
ENSONIG00000000890	arl5c	99	88.268	ENSSDUG00000022640	arl5c	100	88.268	Seriola_dumerili
ENSONIG00000000890	arl5c	99	88.268	ENSSLDG00000000728	arl5c	100	88.268	Seriola_lalandi_dorsalis
ENSONIG00000000890	arl5c	99	88.827	ENSSPAG00000007687	arl5c	100	88.827	Stegastes_partitus
ENSONIG00000000890	arl5c	99	91.620	ENSTRUG00000022814	arl5c	100	91.620	Takifugu_rubripes
ENSONIG00000000890	arl5c	100	88.889	ENSTNIG00000003015	arl5c	100	88.889	Tetraodon_nigroviridis
ENSONIG00000000890	arl5c	99	93.820	ENSXCOG00000017380	arl5c	99	93.820	Xiphophorus_couchianus
ENSONIG00000000890	arl5c	99	93.258	ENSXMAG00000008447	arl5c	99	93.258	Xiphophorus_maculatus