EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000000917 (Gene tree)
Gene ID: 100694568
Gene Symbol: lrpprc
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 71858 bases
Position: chrGL831135.1:4526726-4598583
Accession: 100694568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000001161	PPR	PF01535.20	9.7e-36	1	6
ENSONIP00000001161	PPR	PF01535.20	9.7e-36	2	6
ENSONIP00000001161	PPR	PF01535.20	9.7e-36	3	6
ENSONIP00000001161	PPR	PF01535.20	9.7e-36	4	6
ENSONIP00000001161	PPR	PF01535.20	9.7e-36	5	6
ENSONIP00000001161	PPR	PF01535.20	9.7e-36	6	6
ENSONIP00000001160	PPR	PF01535.20	4e-35	1	6
ENSONIP00000001160	PPR	PF01535.20	4e-35	2	6
ENSONIP00000001160	PPR	PF01535.20	4e-35	3	6
ENSONIP00000001160	PPR	PF01535.20	4e-35	4	6
ENSONIP00000001160	PPR	PF01535.20	4e-35	5	6
ENSONIP00000001160	PPR	PF01535.20	4e-35	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000001160	-	4200	-	ENSONIP00000001161	1400 (aa)	-	I3IX21
ENSONIT00000001159	-	5508	XM_003438436	ENSONIP00000001160	1470 (aa)	XP_003438484	I3IX20

Gene Model

Click here to download ENSONIG00000000917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000000917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000000917	lrpprc	100	78.892	ENSAPOG00000016610	lrpprc	100	80.729	Acanthochromis_polyacanthus
ENSONIG00000000917	lrpprc	97	52.632	ENSAMEG00000005852	LRPPRC	99	52.632	Ailuropoda_melanoleuca
ENSONIG00000000917	lrpprc	100	82.320	ENSACIG00000009604	lrpprc	100	83.718	Amphilophus_citrinellus
ENSONIG00000000917	lrpprc	100	79.636	ENSAOCG00000005886	lrpprc	100	81.329	Amphiprion_ocellaris
ENSONIG00000000917	lrpprc	100	75.651	ENSAPEG00000002937	lrpprc	99	76.768	Amphiprion_percula
ENSONIG00000000917	lrpprc	100	73.600	ENSATEG00000010555	lrpprc	100	74.364	Anabas_testudineus
ENSONIG00000000917	lrpprc	95	57.524	ENSACAG00000029278	LRPPRC	100	55.517	Anolis_carolinensis
ENSONIG00000000917	lrpprc	100	51.595	ENSANAG00000027440	LRPPRC	97	55.598	Aotus_nancymaae
ENSONIG00000000917	lrpprc	98	83.647	ENSACLG00000023712	lrpprc	92	93.235	Astatotilapia_calliptera
ENSONIG00000000917	lrpprc	100	50.779	ENSCJAG00000000794	LRPPRC	97	54.563	Callithrix_jacchus
ENSONIG00000000917	lrpprc	98	52.171	ENSCHIG00000020173	LRPPRC	99	52.180	Capra_hircus
ENSONIG00000000917	lrpprc	95	39.809	ENSCAPG00000013631	LRPPRC	99	41.606	Cavia_aperea
ENSONIG00000000917	lrpprc	86	50.741	ENSCPOG00000000204	LRPPRC	99	50.778	Cavia_porcellus
ENSONIG00000000917	lrpprc	100	51.346	ENSCCAG00000031900	LRPPRC	97	56.061	Cebus_capucinus
ENSONIG00000000917	lrpprc	100	51.099	ENSCATG00000014187	LRPPRC	98	55.513	Cercocebus_atys
ENSONIG00000000917	lrpprc	99	49.929	ENSCLAG00000005203	LRPPRC	99	49.929	Chinchilla_lanigera
ENSONIG00000000917	lrpprc	100	51.349	ENSCSAG00000013233	LRPPRC	100	51.524	Chlorocebus_sabaeus
ENSONIG00000000917	lrpprc	84	51.467	ENSCHOG00000003631	LRPPRC	84	51.467	Choloepus_hoffmanni
ENSONIG00000000917	lrpprc	96	50.111	ENSCANG00000034961	LRPPRC	99	71.491	Colobus_angolensis_palliatus
ENSONIG00000000917	lrpprc	99	50.142	ENSCGRG00001016261	Lrpprc	99	50.595	Cricetulus_griseus_chok1gshd
ENSONIG00000000917	lrpprc	99	50.142	ENSCGRG00000004072	Lrpprc	99	50.595	Cricetulus_griseus_crigri
ENSONIG00000000917	lrpprc	99	53.506	ENSCSEG00000003850	lrpprc	96	61.155	Cynoglossus_semilaevis
ENSONIG00000000917	lrpprc	99	78.788	ENSCVAG00000012967	lrpprc	100	80.211	Cyprinodon_variegatus
ENSONIG00000000917	lrpprc	100	58.926	ENSDARG00000043970	lrpprc	98	59.444	Danio_rerio
ENSONIG00000000917	lrpprc	82	41.278	ENSDNOG00000032336	-	98	41.278	Dasypus_novemcinctus
ENSONIG00000000917	lrpprc	99	51.455	ENSDNOG00000012594	-	99	51.455	Dasypus_novemcinctus
ENSONIG00000000917	lrpprc	96	52.437	ENSDORG00000012233	Lrpprc	99	51.367	Dipodomys_ordii
ENSONIG00000000917	lrpprc	99	51.315	ENSETEG00000006657	LRPPRC	99	51.522	Echinops_telfairi
ENSONIG00000000917	lrpprc	78	50.325	ENSEEUG00000012340	LRPPRC	90	43.351	Erinaceus_europaeus
ENSONIG00000000917	lrpprc	97	59.519	ENSELUG00000012803	lrpprc	99	60.735	Esox_lucius
ENSONIG00000000917	lrpprc	99	52.740	ENSFCAG00000013468	LRPPRC	99	52.916	Felis_catus
ENSONIG00000000917	lrpprc	95	50.522	ENSFALG00000012738	LRPPRC	99	50.522	Ficedula_albicollis
ENSONIG00000000917	lrpprc	99	49.859	ENSFDAG00000015328	LRPPRC	99	49.859	Fukomys_damarensis
ENSONIG00000000917	lrpprc	99	77.183	ENSFHEG00000019604	lrpprc	100	78.737	Fundulus_heteroclitus
ENSONIG00000000917	lrpprc	99	64.229	ENSGMOG00000008337	lrpprc	99	64.685	Gadus_morhua
ENSONIG00000000917	lrpprc	99	75.549	ENSGAFG00000001455	lrpprc	100	76.458	Gambusia_affinis
ENSONIG00000000917	lrpprc	100	73.737	ENSGACG00000010679	lrpprc	100	77.048	Gasterosteus_aculeatus
ENSONIG00000000917	lrpprc	99	97.039	ENSHBUG00000000393	lrpprc	99	97.039	Haplochromis_burtoni
ENSONIG00000000917	lrpprc	99	49.119	ENSHGLG00000006123	LRPPRC	99	49.119	Heterocephalus_glaber_female
ENSONIG00000000917	lrpprc	60	48.746	ENSHGLG00100005960	-	99	48.746	Heterocephalus_glaber_male
ENSONIG00000000917	lrpprc	98	72.773	ENSHCOG00000002107	lrpprc	100	74.026	Hippocampus_comes
ENSONIG00000000917	lrpprc	100	64.410	ENSIPUG00000009406	lrpprc	99	64.816	Ictalurus_punctatus
ENSONIG00000000917	lrpprc	99	51.459	ENSSTOG00000011185	LRPPRC	99	51.348	Ictidomys_tridecemlineatus
ENSONIG00000000917	lrpprc	97	51.205	ENSJJAG00000020475	Lrpprc	100	50.710	Jaculus_jaculus
ENSONIG00000000917	lrpprc	99	65.125	ENSKMAG00000003287	lrpprc	85	66.145	Kryptolebias_marmoratus
ENSONIG00000000917	lrpprc	100	64.446	ENSLBEG00000023225	lrpprc	98	72.727	Labrus_bergylta
ENSONIG00000000917	lrpprc	99	58.947	ENSLACG00000014030	LRPPRC	99	58.947	Latimeria_chalumnae
ENSONIG00000000917	lrpprc	99	62.289	ENSLOCG00000016390	lrpprc	97	62.981	Lepisosteus_oculatus
ENSONIG00000000917	lrpprc	99	48.810	ENSLAFG00000008614	LRPPRC	99	49.267	Loxodonta_africana
ENSONIG00000000917	lrpprc	100	51.275	ENSMFAG00000041560	LRPPRC	99	58.746	Macaca_fascicularis
ENSONIG00000000917	lrpprc	98	51.012	ENSMMUG00000019841	LRPPRC	99	55.455	Macaca_mulatta
ENSONIG00000000917	lrpprc	100	51.240	ENSMNEG00000031613	LRPPRC	98	55.513	Macaca_nemestrina
ENSONIG00000000917	lrpprc	98	66.185	ENSMAMG00000021835	lrpprc	98	66.785	Mastacembelus_armatus
ENSONIG00000000917	lrpprc	97	97.205	ENSMZEG00005027379	lrpprc	100	97.205	Maylandia_zebra
ENSONIG00000000917	lrpprc	99	50.391	ENSMAUG00000012118	Lrpprc	99	51.220	Mesocricetus_auratus
ENSONIG00000000917	lrpprc	99	51.597	ENSMICG00000010486	LRPPRC	98	55.283	Microcebus_murinus
ENSONIG00000000917	lrpprc	99	50.745	ENSMOCG00000006048	Lrpprc	99	50.844	Microtus_ochrogaster
ENSONIG00000000917	lrpprc	99	71.368	ENSMMOG00000007830	lrpprc	94	79.061	Mola_mola
ENSONIG00000000917	lrpprc	95	52.339	ENSMODG00000000648	LRPPRC	99	52.430	Monodelphis_domestica
ENSONIG00000000917	lrpprc	99	71.298	ENSMALG00000001271	lrpprc	100	72.854	Monopterus_albus
ENSONIG00000000917	lrpprc	99	54.198	ENSMPUG00000011800	LRPPRC	99	54.305	Mustela_putorius_furo
ENSONIG00000000917	lrpprc	99	51.744	ENSMLUG00000010575	LRPPRC	99	51.878	Myotis_lucifugus
ENSONIG00000000917	lrpprc	99	51.138	ENSNGAG00000013069	Lrpprc	99	51.163	Nannospalax_galili
ENSONIG00000000917	lrpprc	95	83.258	ENSNBRG00000013202	lrpprc	100	84.203	Neolamprologus_brichardi
ENSONIG00000000917	lrpprc	100	50.035	ENSNLEG00000016782	LRPPRC	99	54.182	Nomascus_leucogenys
ENSONIG00000000917	lrpprc	85	54.098	ENSOPRG00000016774	LRPPRC	89	54.098	Ochotona_princeps
ENSONIG00000000917	lrpprc	99	50.999	ENSODEG00000011211	LRPPRC	99	50.993	Octodon_degus
ENSONIG00000000917	lrpprc	75	47.613	ENSOANG00000014670	-	100	47.416	Ornithorhynchus_anatinus
ENSONIG00000000917	lrpprc	99	52.303	ENSOCUG00000015046	LRPPRC	96	52.064	Oryctolagus_cuniculus
ENSONIG00000000917	lrpprc	100	72.304	ENSORLG00000004605	lrpprc	97	73.699	Oryzias_latipes
ENSONIG00000000917	lrpprc	92	76.769	ENSORLG00020012536	lrpprc	99	77.707	Oryzias_latipes_hni
ENSONIG00000000917	lrpprc	100	70.459	ENSORLG00015018270	lrpprc	100	71.359	Oryzias_latipes_hsok
ENSONIG00000000917	lrpprc	99	51.451	ENSOGAG00000012798	LRPPRC	99	51.807	Otolemur_garnettii
ENSONIG00000000917	lrpprc	96	52.694	ENSOARG00000006522	LRPPRC	99	51.717	Ovis_aries
ENSONIG00000000917	lrpprc	100	49.576	ENSPPAG00000040876	LRPPRC	97	54.406	Pan_paniscus
ENSONIG00000000917	lrpprc	99	52.456	ENSPPRG00000006578	LRPPRC	99	52.488	Panthera_pardus
ENSONIG00000000917	lrpprc	97	53.377	ENSPTIG00000000933	LRPPRC	97	53.377	Panthera_tigris_altaica
ENSONIG00000000917	lrpprc	100	50.568	ENSPTRG00000011880	LRPPRC	97	54.876	Pan_troglodytes
ENSONIG00000000917	lrpprc	100	50.886	ENSPANG00000020731	LRPPRC	98	55.133	Papio_anubis
ENSONIG00000000917	lrpprc	95	50.705	ENSPKIG00000022232	lrpprc	97	59.109	Paramormyrops_kingsleyae
ENSONIG00000000917	lrpprc	62	56.272	ENSPSIG00000006830	-	99	56.272	Pelodiscus_sinensis
ENSONIG00000000917	lrpprc	67	65.389	ENSPMGG00000016597	lrpprc	99	64.493	Periophthalmus_magnuspinnatus
ENSONIG00000000917	lrpprc	94	46.345	ENSPMAG00000002147	lrpprc	100	46.777	Petromyzon_marinus
ENSONIG00000000917	lrpprc	99	74.681	ENSPFOG00000011227	lrpprc	100	75.316	Poecilia_formosa
ENSONIG00000000917	lrpprc	99	74.752	ENSPLAG00000004018	lrpprc	100	75.387	Poecilia_latipinna
ENSONIG00000000917	lrpprc	99	74.610	ENSPMEG00000016425	lrpprc	100	75.246	Poecilia_mexicana
ENSONIG00000000917	lrpprc	99	74.344	ENSPREG00000003662	lrpprc	99	75.301	Poecilia_reticulata
ENSONIG00000000917	lrpprc	58	48.455	ENSPPYG00000029532	-	100	48.455	Pongo_abelii
ENSONIG00000000917	lrpprc	83	51.618	ENSPCAG00000001430	LRPPRC	84	51.833	Procavia_capensis
ENSONIG00000000917	lrpprc	99	50.356	ENSPVAG00000002007	LRPPRC	99	50.356	Pteropus_vampyrus
ENSONIG00000000917	lrpprc	100	81.316	ENSPNYG00000000756	lrpprc	90	91.720	Pundamilia_nyererei
ENSONIG00000000917	lrpprc	99	66.011	ENSPNAG00000002895	lrpprc	99	66.504	Pygocentrus_nattereri
ENSONIG00000000917	lrpprc	99	50.320	ENSRNOG00000005877	Lrpprc	99	50.496	Rattus_norvegicus
ENSONIG00000000917	lrpprc	100	49.753	ENSRBIG00000031552	LRPPRC	100	49.929	Rhinopithecus_bieti
ENSONIG00000000917	lrpprc	100	51.099	ENSSBOG00000011807	LRPPRC	97	55.218	Saimiri_boliviensis_boliviensis
ENSONIG00000000917	lrpprc	95	51.634	ENSSHAG00000018725	LRPPRC	99	52.003	Sarcophilus_harrisii
ENSONIG00000000917	lrpprc	99	57.700	ENSSFOG00015001042	lrpprc	99	57.811	Scleropages_formosus
ENSONIG00000000917	lrpprc	100	75.282	ENSSDUG00000019062	lrpprc	100	76.918	Seriola_dumerili
ENSONIG00000000917	lrpprc	100	57.825	ENSSLDG00000023028	lrpprc	100	58.685	Seriola_lalandi_dorsalis
ENSONIG00000000917	lrpprc	91	49.510	ENSSARG00000000426	LRPPRC	99	49.552	Sorex_araneus
ENSONIG00000000917	lrpprc	100	67.060	ENSSPAG00000000162	lrpprc	100	68.538	Stegastes_partitus
ENSONIG00000000917	lrpprc	99	51.238	ENSSSCG00000008452	LRPPRC	99	51.238	Sus_scrofa
ENSONIG00000000917	lrpprc	94	48.983	ENSTGUG00000003759	LRPPRC	100	49.100	Taeniopygia_guttata
ENSONIG00000000917	lrpprc	100	72.355	ENSTRUG00000008409	lrpprc	97	73.466	Takifugu_rubripes
ENSONIG00000000917	lrpprc	99	70.676	ENSTNIG00000007470	lrpprc	100	72.432	Tetraodon_nigroviridis
ENSONIG00000000917	lrpprc	99	50.177	ENSTTRG00000006403	LRPPRC	99	50.318	Tursiops_truncatus
ENSONIG00000000917	lrpprc	95	49.777	ENSVPAG00000008993	LRPPRC	99	49.777	Vicugna_pacos
ENSONIG00000000917	lrpprc	99	57.539	ENSXETG00000009296	lrpprc	99	57.610	Xenopus_tropicalis
ENSONIG00000000917	lrpprc	99	68.696	ENSXCOG00000013343	lrpprc	95	71.680	Xiphophorus_couchianus
ENSONIG00000000917	lrpprc	99	75.337	ENSXMAG00000018108	lrpprc	100	75.896	Xiphophorus_maculatus