EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000000945 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 54122 bases
Position: chrGL831135.1:4969570-5023691
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000001195	S1	PF00575.23	1.5e-11	1	1
ENSONIP00000001194	S1	PF00575.23	2.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000001193	-	5216	-	ENSONIP00000001194	1021 (aa)	-	I3IX54
ENSONIT00000001194	-	2499	-	ENSONIP00000001195	833 (aa)	-	I3IX55

Gene Model

Click here to download ENSONIG00000000945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000000945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000000945	si:ch211-117n7.8	100	58.343	ENSG00000068784	SRBD1	99	50.921	Homo_sapiens
ENSONIG00000000945	si:ch211-117n7.8	100	85.899	ENSAPOG00000005103	si:ch211-117n7.8	100	83.969	Acanthochromis_polyacanthus
ENSONIG00000000945	si:ch211-117n7.8	99	58.173	ENSAMEG00000005993	SRBD1	99	50.828	Ailuropoda_melanoleuca
ENSONIG00000000945	si:ch211-117n7.8	99	88.005	ENSACIG00000009875	si:ch211-117n7.8	100	87.992	Amphilophus_citrinellus
ENSONIG00000000945	si:ch211-117n7.8	100	85.529	ENSAOCG00000024718	si:ch211-117n7.8	100	82.681	Amphiprion_ocellaris
ENSONIG00000000945	si:ch211-117n7.8	100	85.059	ENSAPEG00000002645	si:ch211-117n7.8	100	82.430	Amphiprion_percula
ENSONIG00000000945	si:ch211-117n7.8	100	84.588	ENSATEG00000010844	si:ch211-117n7.8	100	82.111	Anabas_testudineus
ENSONIG00000000945	si:ch211-117n7.8	99	60.407	ENSAPLG00000006313	SRBD1	100	52.531	Anas_platyrhynchos
ENSONIG00000000945	si:ch211-117n7.8	99	57.933	ENSANAG00000025573	SRBD1	99	50.681	Aotus_nancymaae
ENSONIG00000000945	si:ch211-117n7.8	100	98.433	ENSACLG00000024219	si:ch211-117n7.8	100	98.433	Astatotilapia_calliptera
ENSONIG00000000945	si:ch211-117n7.8	100	70.784	ENSAMXG00000004294	SRBD1	100	63.733	Astyanax_mexicanus
ENSONIG00000000945	si:ch211-117n7.8	99	58.463	ENSBTAG00000007508	SRBD1	99	49.412	Bos_taurus
ENSONIG00000000945	si:ch211-117n7.8	99	58.053	ENSCJAG00000000727	SRBD1	99	50.388	Callithrix_jacchus
ENSONIG00000000945	si:ch211-117n7.8	100	58.443	ENSCAFG00000002554	SRBD1	99	51.158	Canis_familiaris
ENSONIG00000000945	si:ch211-117n7.8	100	58.463	ENSCAFG00020026284	SRBD1	97	57.623	Canis_lupus_dingo
ENSONIG00000000945	si:ch211-117n7.8	99	58.463	ENSCHIG00000016535	SRBD1	98	50.530	Capra_hircus
ENSONIG00000000945	si:ch211-117n7.8	99	58.683	ENSTSYG00000012797	SRBD1	99	51.056	Carlito_syrichta
ENSONIG00000000945	si:ch211-117n7.8	100	57.983	ENSCPOG00000004773	SRBD1	99	51.167	Cavia_porcellus
ENSONIG00000000945	si:ch211-117n7.8	99	58.053	ENSCCAG00000025589	SRBD1	99	50.778	Cebus_capucinus
ENSONIG00000000945	si:ch211-117n7.8	99	58.173	ENSCATG00000039530	SRBD1	96	53.032	Cercocebus_atys
ENSONIG00000000945	si:ch211-117n7.8	99	58.413	ENSCLAG00000008623	SRBD1	100	51.415	Chinchilla_lanigera
ENSONIG00000000945	si:ch211-117n7.8	99	57.933	ENSCSAG00000013350	SRBD1	96	52.605	Chlorocebus_sabaeus
ENSONIG00000000945	si:ch211-117n7.8	83	76.190	ENSCHOG00000003805	SRBD1	82	74.419	Choloepus_hoffmanni
ENSONIG00000000945	si:ch211-117n7.8	99	58.865	ENSCPBG00000005677	SRBD1	97	52.404	Chrysemys_picta_bellii
ENSONIG00000000945	si:ch211-117n7.8	94	39.447	ENSCING00000005950	-	99	39.900	Ciona_intestinalis
ENSONIG00000000945	si:ch211-117n7.8	94	41.772	ENSCSAVG00000000861	-	99	41.646	Ciona_savignyi
ENSONIG00000000945	si:ch211-117n7.8	99	57.692	ENSCANG00000016307	SRBD1	96	52.469	Colobus_angolensis_palliatus
ENSONIG00000000945	si:ch211-117n7.8	100	57.863	ENSCGRG00001000513	Srbd1	84	57.863	Cricetulus_griseus_chok1gshd
ENSONIG00000000945	si:ch211-117n7.8	100	57.863	ENSCGRG00000002283	Srbd1	84	57.863	Cricetulus_griseus_crigri
ENSONIG00000000945	si:ch211-117n7.8	100	78.261	ENSCSEG00000000856	si:ch211-117n7.8	100	72.968	Cynoglossus_semilaevis
ENSONIG00000000945	si:ch211-117n7.8	100	83.647	ENSCVAG00000020212	si:ch211-117n7.8	99	77.600	Cyprinodon_variegatus
ENSONIG00000000945	si:ch211-117n7.8	99	57.177	ENSDNOG00000018686	SRBD1	83	57.057	Dasypus_novemcinctus
ENSONIG00000000945	si:ch211-117n7.8	100	58.223	ENSDORG00000010468	Srbd1	84	58.103	Dipodomys_ordii
ENSONIG00000000945	si:ch211-117n7.8	94	34.158	FBgn0051156	CG31156	79	35.302	Drosophila_melanogaster
ENSONIG00000000945	si:ch211-117n7.8	90	56.437	ENSETEG00000000739	SRBD1	90	57.532	Echinops_telfairi
ENSONIG00000000945	si:ch211-117n7.8	87	46.676	ENSEBUG00000008902	si:ch211-117n7.8	96	46.594	Eptatretus_burgeri
ENSONIG00000000945	si:ch211-117n7.8	99	55.675	ENSEASG00005003132	SRBD1	94	58.981	Equus_asinus_asinus
ENSONIG00000000945	si:ch211-117n7.8	99	57.706	ENSECAG00000013865	SRBD1	94	52.405	Equus_caballus
ENSONIG00000000945	si:ch211-117n7.8	100	73.318	ENSELUG00000012592	si:ch211-117n7.8	100	66.161	Esox_lucius
ENSONIG00000000945	si:ch211-117n7.8	99	58.223	ENSFCAG00000005101	SRBD1	96	52.240	Felis_catus
ENSONIG00000000945	si:ch211-117n7.8	99	59.184	ENSFALG00000012966	SRBD1	96	54.298	Ficedula_albicollis
ENSONIG00000000945	si:ch211-117n7.8	100	58.223	ENSFDAG00000016670	SRBD1	99	51.590	Fukomys_damarensis
ENSONIG00000000945	si:ch211-117n7.8	100	84.706	ENSFHEG00000019480	si:ch211-117n7.8	100	79.961	Fundulus_heteroclitus
ENSONIG00000000945	si:ch211-117n7.8	60	69.545	ENSGMOG00000018010	-	100	71.362	Gadus_morhua
ENSONIG00000000945	si:ch211-117n7.8	99	60.432	ENSGALG00000009990	SRBD1	97	52.657	Gallus_gallus
ENSONIG00000000945	si:ch211-117n7.8	100	84.588	ENSGAFG00000019664	si:ch211-117n7.8	100	79.220	Gambusia_affinis
ENSONIG00000000945	si:ch211-117n7.8	75	87.040	ENSGACG00000010794	si:ch211-117n7.8	100	87.040	Gasterosteus_aculeatus
ENSONIG00000000945	si:ch211-117n7.8	99	59.976	ENSGAGG00000006166	SRBD1	99	59.928	Gopherus_agassizii
ENSONIG00000000945	si:ch211-117n7.8	100	58.463	ENSGGOG00000005910	SRBD1	97	53.409	Gorilla_gorilla
ENSONIG00000000945	si:ch211-117n7.8	100	80.912	ENSHBUG00000013207	si:ch211-117n7.8	100	80.382	Haplochromis_burtoni
ENSONIG00000000945	si:ch211-117n7.8	99	58.173	ENSHGLG00000018153	-	84	57.743	Heterocephalus_glaber_female
ENSONIG00000000945	si:ch211-117n7.8	99	58.173	ENSHGLG00100015183	-	84	57.743	Heterocephalus_glaber_male
ENSONIG00000000945	si:ch211-117n7.8	100	70.952	ENSIPUG00000009661	srbd1	100	64.614	Ictalurus_punctatus
ENSONIG00000000945	si:ch211-117n7.8	100	58.944	ENSSTOG00000005898	SRBD1	100	50.385	Ictidomys_tridecemlineatus
ENSONIG00000000945	si:ch211-117n7.8	99	55.529	ENSJJAG00000022244	Srbd1	100	49.033	Jaculus_jaculus
ENSONIG00000000945	si:ch211-117n7.8	100	86.353	ENSKMAG00000003473	si:ch211-117n7.8	100	81.916	Kryptolebias_marmoratus
ENSONIG00000000945	si:ch211-117n7.8	100	84.279	ENSLBEG00000027518	si:ch211-117n7.8	100	81.391	Labrus_bergylta
ENSONIG00000000945	si:ch211-117n7.8	99	59.664	ENSLACG00000009790	SRBD1	98	59.544	Latimeria_chalumnae
ENSONIG00000000945	si:ch211-117n7.8	100	67.539	ENSLOCG00000016360	si:ch211-117n7.8	99	60.155	Lepisosteus_oculatus
ENSONIG00000000945	si:ch211-117n7.8	99	57.933	ENSMFAG00000042026	SRBD1	96	52.826	Macaca_fascicularis
ENSONIG00000000945	si:ch211-117n7.8	99	57.933	ENSMMUG00000003490	SRBD1	96	52.621	Macaca_mulatta
ENSONIG00000000945	si:ch211-117n7.8	99	56.130	ENSMNEG00000034701	SRBD1	96	51.285	Macaca_nemestrina
ENSONIG00000000945	si:ch211-117n7.8	99	58.053	ENSMLEG00000000745	SRBD1	96	52.929	Mandrillus_leucophaeus
ENSONIG00000000945	si:ch211-117n7.8	98	86.108	ENSMAMG00000021921	si:ch211-117n7.8	100	81.978	Mastacembelus_armatus
ENSONIG00000000945	si:ch211-117n7.8	100	98.531	ENSMZEG00005027369	si:ch211-117n7.8	100	98.531	Maylandia_zebra
ENSONIG00000000945	si:ch211-117n7.8	95	57.519	ENSMGAG00000010273	SRBD1	99	57.519	Meleagris_gallopavo
ENSONIG00000000945	si:ch211-117n7.8	94	56.143	ENSMAUG00000013916	Srbd1	95	56.143	Mesocricetus_auratus
ENSONIG00000000945	si:ch211-117n7.8	99	58.293	ENSMICG00000007835	SRBD1	99	50.913	Microcebus_murinus
ENSONIG00000000945	si:ch211-117n7.8	100	57.383	ENSMOCG00000018716	Srbd1	84	57.383	Microtus_ochrogaster
ENSONIG00000000945	si:ch211-117n7.8	100	81.647	ENSMMOG00000007507	si:ch211-117n7.8	100	78.081	Mola_mola
ENSONIG00000000945	si:ch211-117n7.8	98	86.124	ENSMALG00000001562	si:ch211-117n7.8	100	82.031	Monopterus_albus
ENSONIG00000000945	si:ch211-117n7.8	100	57.623	MGP_CAROLIEiJ_G0021934	Srbd1	99	58.882	Mus_caroli
ENSONIG00000000945	si:ch211-117n7.8	100	57.503	ENSMUSG00000024135	Srbd1	96	56.343	Mus_musculus
ENSONIG00000000945	si:ch211-117n7.8	100	57.383	MGP_PahariEiJ_G0020924	Srbd1	96	51.825	Mus_pahari
ENSONIG00000000945	si:ch211-117n7.8	100	57.623	MGP_SPRETEiJ_G0022850	Srbd1	96	52.242	Mus_spretus
ENSONIG00000000945	si:ch211-117n7.8	99	58.633	ENSMLUG00000007039	SRBD1	96	52.508	Myotis_lucifugus
ENSONIG00000000945	si:ch211-117n7.8	100	55.930	ENSNGAG00000011893	Srbd1	99	49.390	Nannospalax_galili
ENSONIG00000000945	si:ch211-117n7.8	100	92.280	ENSNBRG00000012873	si:ch211-117n7.8	100	91.908	Neolamprologus_brichardi
ENSONIG00000000945	si:ch211-117n7.8	100	58.343	ENSNLEG00000016877	SRBD1	99	50.921	Nomascus_leucogenys
ENSONIG00000000945	si:ch211-117n7.8	99	57.091	ENSODEG00000012095	SRBD1	95	52.311	Octodon_degus
ENSONIG00000000945	si:ch211-117n7.8	99	58.103	ENSOCUG00000015385	SRBD1	99	51.201	Oryctolagus_cuniculus
ENSONIG00000000945	si:ch211-117n7.8	100	79.059	ENSORLG00000004427	si:ch211-117n7.8	100	74.927	Oryzias_latipes
ENSONIG00000000945	si:ch211-117n7.8	100	82.256	ENSORLG00020012792	si:ch211-117n7.8	100	77.799	Oryzias_latipes_hni
ENSONIG00000000945	si:ch211-117n7.8	100	82.235	ENSORLG00015018598	si:ch211-117n7.8	100	77.583	Oryzias_latipes_hsok
ENSONIG00000000945	si:ch211-117n7.8	100	81.228	ENSOMEG00000012229	si:ch211-117n7.8	99	81.061	Oryzias_melastigma
ENSONIG00000000945	si:ch211-117n7.8	99	56.062	ENSOGAG00000001076	SRBD1	96	50.926	Otolemur_garnettii
ENSONIG00000000945	si:ch211-117n7.8	99	54.378	ENSOARG00000005958	SRBD1	99	47.481	Ovis_aries
ENSONIG00000000945	si:ch211-117n7.8	100	58.103	ENSPPAG00000038442	SRBD1	99	50.914	Pan_paniscus
ENSONIG00000000945	si:ch211-117n7.8	99	58.293	ENSPPRG00000003449	SRBD1	96	52.749	Panthera_pardus
ENSONIG00000000945	si:ch211-117n7.8	99	58.293	ENSPTIG00000012495	SRBD1	96	52.798	Panthera_tigris_altaica
ENSONIG00000000945	si:ch211-117n7.8	100	58.103	ENSPTRG00000011889	SRBD1	99	50.914	Pan_troglodytes
ENSONIG00000000945	si:ch211-117n7.8	99	57.933	ENSPANG00000008063	SRBD1	96	52.572	Papio_anubis
ENSONIG00000000945	si:ch211-117n7.8	100	68.966	ENSPKIG00000021973	si:ch211-117n7.8	99	60.600	Paramormyrops_kingsleyae
ENSONIG00000000945	si:ch211-117n7.8	99	58.629	ENSPSIG00000008992	SRBD1	99	50.616	Pelodiscus_sinensis
ENSONIG00000000945	si:ch211-117n7.8	100	79.505	ENSPMGG00000013348	si:ch211-117n7.8	99	73.626	Periophthalmus_magnuspinnatus
ENSONIG00000000945	si:ch211-117n7.8	100	55.855	ENSPEMG00000020684	Srbd1	84	55.855	Peromyscus_maniculatus_bairdii
ENSONIG00000000945	si:ch211-117n7.8	100	84.471	ENSPFOG00000010650	si:ch211-117n7.8	100	79.610	Poecilia_formosa
ENSONIG00000000945	si:ch211-117n7.8	100	84.588	ENSPLAG00000002141	si:ch211-117n7.8	100	79.805	Poecilia_latipinna
ENSONIG00000000945	si:ch211-117n7.8	100	84.588	ENSPMEG00000018537	si:ch211-117n7.8	100	79.707	Poecilia_mexicana
ENSONIG00000000945	si:ch211-117n7.8	100	84.606	ENSPREG00000003258	si:ch211-117n7.8	100	77.713	Poecilia_reticulata
ENSONIG00000000945	si:ch211-117n7.8	100	54.087	ENSPPYG00000012444	SRBD1	98	47.527	Pongo_abelii
ENSONIG00000000945	si:ch211-117n7.8	91	52.368	ENSPCAG00000005629	SRBD1	80	52.053	Procavia_capensis
ENSONIG00000000945	si:ch211-117n7.8	99	48.749	ENSPCOG00000017669	SRBD1	99	43.528	Propithecus_coquereli
ENSONIG00000000945	si:ch211-117n7.8	100	51.381	ENSPVAG00000001782	SRBD1	100	44.742	Pteropus_vampyrus
ENSONIG00000000945	si:ch211-117n7.8	100	90.250	ENSPNYG00000000508	si:ch211-117n7.8	100	89.325	Pundamilia_nyererei
ENSONIG00000000945	si:ch211-117n7.8	100	72.262	ENSPNAG00000013492	SRBD1	98	64.625	Pygocentrus_nattereri
ENSONIG00000000945	si:ch211-117n7.8	100	57.263	ENSRNOG00000014720	Srbd1	83	57.263	Rattus_norvegicus
ENSONIG00000000945	si:ch211-117n7.8	99	57.812	ENSRBIG00000033486	SRBD1	96	52.621	Rhinopithecus_bieti
ENSONIG00000000945	si:ch211-117n7.8	99	57.812	ENSRROG00000041599	SRBD1	96	52.621	Rhinopithecus_roxellana
ENSONIG00000000945	si:ch211-117n7.8	100	58.583	ENSSBOG00000024982	SRBD1	99	50.533	Saimiri_boliviensis_boliviensis
ENSONIG00000000945	si:ch211-117n7.8	99	67.101	ENSSFOG00015001128	si:ch211-117n7.8	94	66.667	Scleropages_formosus
ENSONIG00000000945	si:ch211-117n7.8	100	84.235	ENSSMAG00000018256	si:ch211-117n7.8	100	81.073	Scophthalmus_maximus
ENSONIG00000000945	si:ch211-117n7.8	100	87.294	ENSSLDG00000023189	si:ch211-117n7.8	100	83.992	Seriola_lalandi_dorsalis
ENSONIG00000000945	si:ch211-117n7.8	100	53.318	ENSSARG00000009740	SRBD1	99	47.271	Sorex_araneus
ENSONIG00000000945	si:ch211-117n7.8	99	60.024	ENSSPUG00000010475	SRBD1	94	58.754	Sphenodon_punctatus
ENSONIG00000000945	si:ch211-117n7.8	100	82.374	ENSSPAG00000008092	-	99	78.803	Stegastes_partitus
ENSONIG00000000945	si:ch211-117n7.8	100	58.563	ENSSSCG00000008445	SRBD1	94	52.658	Sus_scrofa
ENSONIG00000000945	si:ch211-117n7.8	99	59.641	ENSTGUG00000003878	SRBD1	100	59.569	Taeniopygia_guttata
ENSONIG00000000945	si:ch211-117n7.8	100	81.294	ENSTRUG00000007080	si:ch211-117n7.8	98	81.777	Takifugu_rubripes
ENSONIG00000000945	si:ch211-117n7.8	100	81.221	ENSTNIG00000007464	si:ch211-117n7.8	98	74.165	Tetraodon_nigroviridis
ENSONIG00000000945	si:ch211-117n7.8	66	79.787	ENSTBEG00000004556	SRBD1	69	79.787	Tupaia_belangeri
ENSONIG00000000945	si:ch211-117n7.8	91	59.820	ENSTTRG00000011871	SRBD1	91	57.065	Tursiops_truncatus
ENSONIG00000000945	si:ch211-117n7.8	99	58.343	ENSUAMG00000008126	SRBD1	97	54.513	Ursus_americanus
ENSONIG00000000945	si:ch211-117n7.8	99	58.343	ENSUMAG00000012902	SRBD1	97	51.018	Ursus_maritimus
ENSONIG00000000945	si:ch211-117n7.8	99	57.572	ENSVPAG00000006825	SRBD1	92	57.452	Vicugna_pacos
ENSONIG00000000945	si:ch211-117n7.8	100	60.484	ENSVVUG00000005389	SRBD1	99	51.354	Vulpes_vulpes
ENSONIG00000000945	si:ch211-117n7.8	99	49.083	ENSXETG00000002760	srbd1	98	45.009	Xenopus_tropicalis
ENSONIG00000000945	si:ch211-117n7.8	100	84.706	ENSXMAG00000016861	si:ch211-117n7.8	100	79.610	Xiphophorus_maculatus