EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000001085 (Gene tree)
Gene ID: 100705748
Gene Symbol: gar1
Alias: -
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 5135 bases
Position: chrGL831156.1:1568973-1574107
Accession: 100705748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000001376	Gar1	PF04410.14	1.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000001375	-	2885	-	ENSONIP00000001376	222 (aa)	XP_003443445	I3IXN6

Gene Model

Click here to download ENSONIG00000001085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000001085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000001085	gar1	69	79.221	ENSACAG00000010031	GAR1	50	92.453	Anolis_carolinensis
ENSONIG00000001085	gar1	50	92.727	ENSCHIG00000016026	-	51	94.393	Capra_hircus
ENSONIG00000001085	gar1	50	92.727	ENSCATG00000021854	GAR1	54	94.393	Cercocebus_atys
ENSONIG00000001085	gar1	50	91.818	ENSCLAG00000005335	GAR1	69	96.364	Chinchilla_lanigera
ENSONIG00000001085	gar1	56	92.742	ENSCGRG00000010165	-	92	92.742	Cricetulus_griseus_crigri
ENSONIG00000001085	gar1	50	93.636	ENSEASG00005004658	GAR1	50	95.327	Equus_asinus_asinus
ENSONIG00000001085	gar1	50	92.727	ENSECAG00000013624	GAR1	54	94.393	Equus_caballus
ENSONIG00000001085	gar1	69	49.351	ENSFCAG00000025841	-	50	59.813	Felis_catus
ENSONIG00000001085	gar1	50	97.297	ENSFHEG00000008068	gar1	50	97.222	Fundulus_heteroclitus
ENSONIG00000001085	gar1	70	96.774	ENSHBUG00000023860	gar1	79	96.774	Haplochromis_burtoni
ENSONIG00000001085	gar1	50	96.364	ENSIPUG00000003194	gar1	51	96.296	Ictalurus_punctatus
ENSONIG00000001085	gar1	50	95.495	ENSKMAG00000010402	gar1	51	96.296	Kryptolebias_marmoratus
ENSONIG00000001085	gar1	81	78.676	ENSLACG00000003306	GAR1	89	85.714	Latimeria_chalumnae
ENSONIG00000001085	gar1	74	78.788	ENSMALG00000009672	gar1	50	95.370	Monopterus_albus
ENSONIG00000001085	gar1	50	93.636	ENSMUSG00000028010	Gar1	96	94.805	Mus_musculus
ENSONIG00000001085	gar1	50	93.636	MGP_PahariEiJ_G0027076	Gar1	96	94.805	Mus_pahari
ENSONIG00000001085	gar1	50	93.636	MGP_SPRETEiJ_G0026580	Gar1	96	94.805	Mus_spretus
ENSONIG00000001085	gar1	50	92.727	ENSNGAG00000008268	Gar1	71	96.364	Nannospalax_galili
ENSONIG00000001085	gar1	99	95.455	ENSNBRG00000014828	gar1	93	95.455	Neolamprologus_brichardi
ENSONIG00000001085	gar1	50	92.727	ENSNLEG00000016578	GAR1	50	94.393	Nomascus_leucogenys
ENSONIG00000001085	gar1	50	92.727	ENSPTRG00000016364	GAR1	54	94.393	Pan_troglodytes
ENSONIG00000001085	gar1	68	77.064	ENSPTRG00000049340	-	51	76.636	Pan_troglodytes
ENSONIG00000001085	gar1	50	76.786	ENSRBIG00000042411	-	52	77.570	Rhinopithecus_bieti
ENSONIG00000001085	gar1	50	76.786	ENSRROG00000044348	-	51	77.570	Rhinopithecus_roxellana
ENSONIG00000001085	gar1	50	92.727	ENSRROG00000028454	GAR1	54	94.393	Rhinopithecus_roxellana
ENSONIG00000001085	gar1	70	79.487	ENSSPUG00000008707	GAR1	59	94.340	Sphenodon_punctatus
ENSONIG00000001085	gar1	50	92.727	ENSSSCG00000009137	GAR1	53	94.393	Sus_scrofa