EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSONIG00000001113 (Gene tree)
Gene ID
100691790
Gene Symbol
rab5c
Alias
-
Full Name
RAB5C%2C member RAS oncogene family
Gene Type
protein_coding
Species
Oreochromis_niloticus
Status
putative
Strand
Minus strand
Length
6048 bases
Position
chrGL831149.1:2346605-2352652
Accession
100691790
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSONIP00000001409MMR_HSR1PF01926.230.0001111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSONIT00000001408-2894-ENSONIP00000001409220 (aa)XP_003442080I3IXR9
Gene Model
Click here to download ENSONIG00000001113's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000001113's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSONIG00000001113rab5c7447.239ENSONIG00000015072RAB11A7647.239
ENSONIG00000001113rab5c8950.510ENSONIG00000006876rab22a8455.215
ENSONIG00000001113rab5c7436.585ENSONIG00000006997-7736.585
ENSONIG00000001113rab5c7843.182ENSONIG00000019036-8543.182
ENSONIG00000001113rab5c8944.615ENSONIG00000006819-9544.103
ENSONIG00000001113rab5c7347.826ENSONIG00000002535rab11ba7447.826
ENSONIG00000001113rab5c8938.389ENSONIG00000016851-7544.444
ENSONIG00000001113rab5c9133.010ENSONIG00000020945-9932.524
ENSONIG00000001113rab5c7734.483ENSONIG00000020675rab9a8534.483
ENSONIG00000001113rab5c7339.130ENSONIG00000005781rab157639.130
ENSONIG00000001113rab5c7234.810ENSONIG00000009749rab236736.875
ENSONIG00000001113rab5c7636.905ENSONIG00000018469rab126936.905
ENSONIG00000001113rab5c7038.312ENSONIG00000012069RAB157338.312
ENSONIG00000001113rab5c7539.766ENSONIG00000006715-7339.766
ENSONIG00000001113rab5c5431.148ENSONIG00000014667arl8a6131.148
ENSONIG00000001113rab5c8943.077ENSONIG00000002065rab1ba8046.626
ENSONIG00000001113rab5c7334.756ENSONIG00000020296si:dkey-13a21.48034.756
ENSONIG00000001113rab5c7132.500ENSONIG00000005519rab34b6333.125
ENSONIG00000001113rab5c7443.902ENSONIG00000002774RAB418342.286
ENSONIG00000001113rab5c7452.121ENSONIG00000016776RAB179152.121
ENSONIG00000001113rab5c5530.400ENSONIG00000000864-7430.400
ENSONIG00000001113rab5c7534.286ENSONIG00000003367-8534.286
ENSONIG00000001113rab5c8942.512ENSONIG00000002410rab25a9442.714
ENSONIG00000001113rab5c5431.148ENSONIG00000004057arl8ba6231.148
ENSONIG00000001113rab5c7338.554ENSONIG00000015828rab33a5938.554
ENSONIG00000001113rab5c7444.172ENSONIG00000004394rab6a7844.172
ENSONIG00000001113rab5c9490.338ENSONIG00000016279-10088.739
ENSONIG00000001113rab5c7942.697ENSONIG00000020336RAB7A9939.320
ENSONIG00000001113rab5c8735.577ENSONIG00000011559rab33ba8536.538
ENSONIG00000001113rab5c7032.468ENSONIG00000018503rheb8332.468
ENSONIG00000001113rab5c7546.061ENSONIG00000018673rab18b8046.061
ENSONIG00000001113rab5c6632.877ENSONIG00000009978si:cabz01085950.17432.667
ENSONIG00000001113rab5c8640.625ENSONIG00000009886rab6bb8043.373
ENSONIG00000001113rab5c7334.132ENSONIG00000014892RAB298034.132
ENSONIG00000001113rab5c7644.048ENSONIG00000005708rab308244.311
ENSONIG00000001113rab5c9884.722ENSONIG00000002425rab5aa9984.259
ENSONIG00000001113rab5c5532.258ENSONIG00000020279arl8bb6332.258
ENSONIG00000001113rab5c7243.038ENSONIG00000009443si:dkey-16l2.169637.811
ENSONIG00000001113rab5c8342.051ENSONIG00000003725rab18a8043.636
ENSONIG00000001113rab5c8640.212ENSONIG00000014099rab148740.212
ENSONIG00000001113rab5c7437.805ENSONIG00000008545RAB39B7737.805
ENSONIG00000001113rab5c8039.773ENSONIG00000006340rab138341.317
ENSONIG00000001113rab5c7335.404ENSONIG00000014885rabl27135.366
ENSONIG00000001113rab5c7148.408ENSONIG00000002281rab11al7348.408
ENSONIG00000001113rab5c7446.626ENSONIG00000002284rab25b7946.626
ENSONIG00000001113rab5c7532.530ENSONIG00000014717kras9031.579
ENSONIG00000001113rab5c8936.923ENSONIG00000015990rab35b9636.923
ENSONIG00000001113rab5c7238.994ENSONIG00000011542-9838.994
ENSONIG00000001113rab5c8941.667ENSONIG00000010435rab11bb7547.239
ENSONIG00000001113rab5c7935.393ENSONIG00000020581rab9b8835.393
ENSONIG00000001113rab5c8941.667ENSONIG00000002544-7547.239
ENSONIG00000001113rab5c7742.012ENSONIG00000000558-7642.683
ENSONIG00000001113rab5c7742.012ENSONIG00000016622rab2a7643.478
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSONIG00000001113rab5c9891.204ENSG00000108774RAB5C10095.161Homo_sapiens
ENSONIG00000001113rab5c10096.364ENSAPOG00000016864rab5c10096.364Acanthochromis_polyacanthus
ENSONIG00000001113rab5c9891.204ENSAMEG00000006003RAB5C9988.889Ailuropoda_melanoleuca
ENSONIG00000001113rab5c10098.182ENSACIG00000010896rab5c10098.182Amphilophus_citrinellus
ENSONIG00000001113rab5c10096.364ENSAOCG00000016614rab5c10096.364Amphiprion_ocellaris
ENSONIG00000001113rab5c9896.279ENSAPEG00000017868-9996.279Amphiprion_percula
ENSONIG00000001113rab5c9997.235ENSATEG00000001937rab5c9997.235Anabas_testudineus
ENSONIG00000001113rab5c9393.171ENSANAG00000025390RAB5C10090.244Aotus_nancymaae
ENSONIG00000001113rab5c10098.182ENSACLG00000002706rab5c10098.182Astatotilapia_calliptera
ENSONIG00000001113rab5c9689.623ENSACLG00000008615-10088.288Astatotilapia_calliptera
ENSONIG00000001113rab5c9591.827ENSAMXG00000037267-9991.827Astyanax_mexicanus
ENSONIG00000001113rab5c10096.833ENSAMXG00000043717rab5c10096.833Astyanax_mexicanus
ENSONIG00000001113rab5c9891.204ENSBTAG00000006982RAB5C9988.426Bos_taurus
ENSONIG00000001113rab5c9675.000WBGene00004268rab-59974.194Caenorhabditis_elegans
ENSONIG00000001113rab5c9891.204ENSCAFG00000015629RAB5C9988.889Canis_familiaris
ENSONIG00000001113rab5c9891.204ENSCAFG00020013537RAB5C9988.889Canis_lupus_dingo
ENSONIG00000001113rab5c9891.204ENSCHIG00000012960RAB5C9988.426Capra_hircus
ENSONIG00000001113rab5c9891.667ENSTSYG00000030531RAB5C9988.889Carlito_syrichta
ENSONIG00000001113rab5c9891.204ENSCCAG00000025940RAB5C9988.426Cebus_capucinus
ENSONIG00000001113rab5c9891.204ENSCATG00000040873RAB5C9988.889Cercocebus_atys
ENSONIG00000001113rab5c9891.204ENSCLAG00000016650RAB5C9988.426Chinchilla_lanigera
ENSONIG00000001113rab5c8194.382ENSCHOG00000009886RAB5C10094.382Choloepus_hoffmanni
ENSONIG00000001113rab5c10074.545ENSCING00000003340-10074.545Ciona_intestinalis
ENSONIG00000001113rab5c9975.893ENSCSAVG00000000613-9983.951Ciona_savignyi
ENSONIG00000001113rab5c9890.741ENSCGRG00001014226Rab5c9988.426Cricetulus_griseus_chok1gshd
ENSONIG00000001113rab5c9890.741ENSCGRG00000007534Rab5c9988.426Cricetulus_griseus_crigri
ENSONIG00000001113rab5c10095.000ENSCSEG00000017024rab5c10095.000Cynoglossus_semilaevis
ENSONIG00000001113rab5c10095.000ENSCVAG00000009550rab5c10095.000Cyprinodon_variegatus
ENSONIG00000001113rab5c9890.741ENSDNOG00000038853RAB5C9987.963Dasypus_novemcinctus
ENSONIG00000001113rab5c9892.130ENSDORG00000006819Rab5c9989.352Dipodomys_ordii
ENSONIG00000001113rab5c9076.263FBgn0014010Rab58480.000Drosophila_melanogaster
ENSONIG00000001113rab5c8983.163ENSEBUG00000014794rab5c8886.559Eptatretus_burgeri
ENSONIG00000001113rab5c9891.204ENSEASG00005009281RAB5C9988.889Equus_asinus_asinus
ENSONIG00000001113rab5c9891.667ENSECAG00000025054RAB5C9988.889Equus_caballus
ENSONIG00000001113rab5c9891.204ENSEEUG00000002790RAB5C9988.426Erinaceus_europaeus
ENSONIG00000001113rab5c9894.444ENSELUG00000018516rab5c9994.444Esox_lucius
ENSONIG00000001113rab5c10091.818ENSELUG00000010439-10091.818Esox_lucius
ENSONIG00000001113rab5c9891.204ENSFCAG00000002148RAB5C9988.426Felis_catus
ENSONIG00000001113rab5c9890.278ENSFDAG00000021541RAB5C9987.963Fukomys_damarensis
ENSONIG00000001113rab5c9990.411ENSFHEG00000015268-9990.411Fundulus_heteroclitus
ENSONIG00000001113rab5c10096.364ENSFHEG00000012117rab5c10096.364Fundulus_heteroclitus
ENSONIG00000001113rab5c10095.909ENSGMOG00000015096rab5c10095.909Gadus_morhua
ENSONIG00000001113rab5c7687.500ENSGMOG00000001876-9787.500Gadus_morhua
ENSONIG00000001113rab5c9590.909ENSGAFG00000003642-9988.739Gambusia_affinis
ENSONIG00000001113rab5c10096.364ENSGAFG00000000884rab5c10096.364Gambusia_affinis
ENSONIG00000001113rab5c10091.818ENSGACG00000008659rab5c10091.818Gasterosteus_aculeatus
ENSONIG00000001113rab5c9891.204ENSGGOG00000005472RAB5C9988.889Gorilla_gorilla
ENSONIG00000001113rab5c10098.182ENSHBUG00000002014rab5c10098.182Haplochromis_burtoni
ENSONIG00000001113rab5c9689.623ENSHBUG00000006823-10088.288Haplochromis_burtoni
ENSONIG00000001113rab5c9889.815ENSHGLG00000012067RAB5C9987.500Heterocephalus_glaber_female
ENSONIG00000001113rab5c10095.475ENSHCOG00000004662rab5c9896.347Hippocampus_comes
ENSONIG00000001113rab5c9581.429ENSHCOG00000020238-10079.386Hippocampus_comes
ENSONIG00000001113rab5c9594.258ENSIPUG00000020082rab5c10093.694Ictalurus_punctatus
ENSONIG00000001113rab5c9891.204ENSSTOG00000006620RAB5C9988.426Ictidomys_tridecemlineatus
ENSONIG00000001113rab5c9891.204ENSJJAG00000021181Rab5c9988.426Jaculus_jaculus
ENSONIG00000001113rab5c9990.411ENSKMAG00000017417-9990.411Kryptolebias_marmoratus
ENSONIG00000001113rab5c10096.818ENSKMAG00000020038rab5c10096.818Kryptolebias_marmoratus
ENSONIG00000001113rab5c10097.273ENSLBEG00000004128rab5c10097.273Labrus_bergylta
ENSONIG00000001113rab5c10090.498ENSLBEG00000010408-10090.498Labrus_bergylta
ENSONIG00000001113rab5c9893.519ENSLOCG00000012566rab5c10091.204Lepisosteus_oculatus
ENSONIG00000001113rab5c9891.204ENSMFAG00000039627RAB5C9988.889Macaca_fascicularis
ENSONIG00000001113rab5c9891.204ENSMNEG00000000355RAB5C9988.889Macaca_nemestrina
ENSONIG00000001113rab5c9991.324ENSMAMG00000016207-9991.324Mastacembelus_armatus
ENSONIG00000001113rab5c10096.818ENSMAMG00000022322rab5c10096.818Mastacembelus_armatus
ENSONIG00000001113rab5c9689.623ENSMZEG00005021090-10088.288Maylandia_zebra
ENSONIG00000001113rab5c10098.182ENSMZEG00005022735rab5c10098.182Maylandia_zebra
ENSONIG00000001113rab5c9891.667ENSMAUG00000015005Rab5c9988.889Mesocricetus_auratus
ENSONIG00000001113rab5c9891.667ENSMICG00000041608RAB5C9988.889Microcebus_murinus
ENSONIG00000001113rab5c9891.204ENSMOCG00000018531-9988.426Microtus_ochrogaster
ENSONIG00000001113rab5c10095.909ENSMMOG00000020621rab5c10095.909Mola_mola
ENSONIG00000001113rab5c9889.767ENSMALG00000006052rab5c9789.954Monopterus_albus
ENSONIG00000001113rab5c9988.584ENSMALG00000022348-9988.584Monopterus_albus
ENSONIG00000001113rab5c9892.130MGP_CAROLIEiJ_G0017184Rab5c9988.889Mus_caroli
ENSONIG00000001113rab5c9892.130ENSMUSG00000019173Rab5c9988.889Mus_musculus
ENSONIG00000001113rab5c9892.130MGP_PahariEiJ_G0018314Rab5c9988.889Mus_pahari
ENSONIG00000001113rab5c9892.130MGP_SPRETEiJ_G0018027Rab5c9988.889Mus_spretus
ENSONIG00000001113rab5c9891.204ENSMPUG00000010554RAB5C9988.889Mustela_putorius_furo
ENSONIG00000001113rab5c9891.204ENSNGAG00000010286Rab5c9988.426Nannospalax_galili
ENSONIG00000001113rab5c10099.091ENSNBRG00000018165rab5c10099.091Neolamprologus_brichardi
ENSONIG00000001113rab5c9689.623ENSNBRG00000016922-10088.288Neolamprologus_brichardi
ENSONIG00000001113rab5c8187.640ENSOPRG00000008255RAB5C10087.640Ochotona_princeps
ENSONIG00000001113rab5c9890.741ENSODEG00000017920RAB5C9987.963Octodon_degus
ENSONIG00000001113rab5c9995.853ENSORLG00000003882rab5c9995.853Oryzias_latipes
ENSONIG00000001113rab5c9995.392ENSORLG00020008388rab5c9995.392Oryzias_latipes_hni
ENSONIG00000001113rab5c9995.853ENSORLG00015021900rab5c9995.853Oryzias_latipes_hsok
ENSONIG00000001113rab5c9995.853ENSOMEG00000023078rab5c9995.853Oryzias_melastigma
ENSONIG00000001113rab5c9891.667ENSOGAG00000009456RAB5C9988.889Otolemur_garnettii
ENSONIG00000001113rab5c9891.204ENSOARG00000018768RAB5C9988.426Ovis_aries
ENSONIG00000001113rab5c9891.204ENSPPAG00000037206RAB5C9988.889Pan_paniscus
ENSONIG00000001113rab5c9891.204ENSPPRG00000005745RAB5C9988.426Panthera_pardus
ENSONIG00000001113rab5c9891.204ENSPTIG00000008177RAB5C9988.426Panthera_tigris_altaica
ENSONIG00000001113rab5c9891.204ENSPTRG00000009194RAB5C9988.889Pan_troglodytes
ENSONIG00000001113rab5c9888.426ENSPKIG00000001237-9986.574Paramormyrops_kingsleyae
ENSONIG00000001113rab5c9887.963ENSPKIG00000020112-9987.963Paramormyrops_kingsleyae
ENSONIG00000001113rab5c10092.273ENSPMGG00000010792rab5c9993.953Periophthalmus_magnuspinnatus
ENSONIG00000001113rab5c9891.204ENSPEMG00000017971Rab5c9988.426Peromyscus_maniculatus_bairdii
ENSONIG00000001113rab5c9878.281ENSPMAG00000000008rab5c8886.458Petromyzon_marinus
ENSONIG00000001113rab5c8781.250ENSPMAG00000007867rab5c8982.447Petromyzon_marinus
ENSONIG00000001113rab5c9976.498ENSPMAG00000001399rab5c9976.852Petromyzon_marinus
ENSONIG00000001113rab5c9891.204ENSPCIG00000020225-9988.889Phascolarctos_cinereus
ENSONIG00000001113rab5c9989.954ENSPLAG00000016333-10089.954Poecilia_latipinna
ENSONIG00000001113rab5c10096.364ENSPLAG00000004790rab5c10096.364Poecilia_latipinna
ENSONIG00000001113rab5c9691.080ENSPMEG00000012614-10089.686Poecilia_mexicana
ENSONIG00000001113rab5c10096.364ENSPMEG00000011336rab5c10096.364Poecilia_mexicana
ENSONIG00000001113rab5c8591.005ENSPREG00000022167-8992.350Poecilia_reticulata
ENSONIG00000001113rab5c10096.364ENSPREG00000010146rab5c10096.364Poecilia_reticulata
ENSONIG00000001113rab5c9891.204ENSPPYG00000008398RAB5C9988.889Pongo_abelii
ENSONIG00000001113rab5c9890.278ENSPCAG00000016412RAB5C9987.500Procavia_capensis
ENSONIG00000001113rab5c9890.741ENSPCOG00000026327RAB5C9988.426Propithecus_coquereli
ENSONIG00000001113rab5c9891.667ENSPVAG00000003867RAB5C9988.889Pteropus_vampyrus
ENSONIG00000001113rab5c10098.182ENSPNYG00000010615rab5c10098.182Pundamilia_nyererei
ENSONIG00000001113rab5c9689.623ENSPNYG00000015851-10088.288Pundamilia_nyererei
ENSONIG00000001113rab5c10095.928ENSPNAG00000028138rab5c10095.928Pygocentrus_nattereri
ENSONIG00000001113rab5c9589.474ENSPNAG00000002218-9889.474Pygocentrus_nattereri
ENSONIG00000001113rab5c9891.667ENSRNOG00000018568Rab5c9988.889Rattus_norvegicus
ENSONIG00000001113rab5c9891.204ENSRBIG00000031376RAB5C9988.889Rhinopithecus_bieti
ENSONIG00000001113rab5c9891.204ENSRROG00000032895RAB5C9988.889Rhinopithecus_roxellana
ENSONIG00000001113rab5c9891.204ENSSBOG00000032552-9988.426Saimiri_boliviensis_boliviensis
ENSONIG00000001113rab5c9891.667ENSSHAG00000005267-9989.352Sarcophilus_harrisii
ENSONIG00000001113rab5c10086.364ENSSFOG00015009988-10086.364Scleropages_formosus
ENSONIG00000001113rab5c9596.172ENSSMAG00000007323rab5c10095.455Scophthalmus_maximus
ENSONIG00000001113rab5c10096.364ENSSDUG00000023008rab5c10096.364Seriola_dumerili
ENSONIG00000001113rab5c10095.455ENSSLDG00000017771rab5c10095.455Seriola_lalandi_dorsalis
ENSONIG00000001113rab5c9891.204ENSSPUG00000012950-9988.889Sphenodon_punctatus
ENSONIG00000001113rab5c10098.636ENSSPAG00000006436rab5c10098.636Stegastes_partitus
ENSONIG00000001113rab5c9891.204ENSSSCG00000032467RAB5C9988.426Sus_scrofa
ENSONIG00000001113rab5c10095.000ENSTRUG00000015590rab5c10095.000Takifugu_rubripes
ENSONIG00000001113rab5c9696.682ENSTNIG00000011711rab5c9596.682Tetraodon_nigroviridis
ENSONIG00000001113rab5c9891.204ENSTBEG00000007092RAB5C9988.889Tupaia_belangeri
ENSONIG00000001113rab5c9890.278ENSTTRG00000006673RAB5C9987.963Tursiops_truncatus
ENSONIG00000001113rab5c9891.204ENSUAMG00000024343RAB5C9988.889Ursus_americanus
ENSONIG00000001113rab5c9891.204ENSUMAG00000023270RAB5C9988.889Ursus_maritimus
ENSONIG00000001113rab5c10096.364ENSXCOG00000016788rab5c10096.364Xiphophorus_couchianus
ENSONIG00000001113rab5c9591.388ENSXCOG00000006300-9989.189Xiphophorus_couchianus
ENSONIG00000001113rab5c10096.364ENSXMAG00000003266rab5c10096.364Xiphophorus_maculatus
ENSONIG00000001113rab5c9989.498ENSXMAG00000022179-10089.498Xiphophorus_maculatus

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