EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSONIG00000001187 (Gene tree)
Gene ID: 100708578
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 2792 bases
Position: chrGL831135.1:6416566-6419357
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000001501	GTP_EFTU	PF00009.27	2.4e-53	1	1
ENSONIP00000001501	GTP_EFTU_D2	PF03144.25	8.2e-15	1	1
ENSONIP00000001501	GTP_EFTU_D3	PF03143.17	2.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000001500	-	1389	-	ENSONIP00000001501	462 (aa)	-	I3IY11

Gene Model

Click here to download ENSONIG00000001187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000001187's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000001187	-	76	86.648	ENSONIG00000017760	-	98	86.648
ENSONIG00000001187	-	94	41.055	ENSONIG00000000460	hbs1l	61	40.961
ENSONIG00000001187	-	96	71.558	ENSONIG00000006165	si:dkey-37o8.1	97	71.558
ENSONIG00000001187	-	95	37.783	ENSONIG00000003456	gspt1l	74	37.783
ENSONIG00000001187	-	95	38.375	ENSONIG00000019754	-	73	38.462
ENSONIG00000001187	-	100	96.970	ENSONIG00000008977	eef1a1b	100	96.970
ENSONIG00000001187	-	100	87.041	ENSONIG00000017758	-	100	87.041