EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000001260 (Gene tree)
Gene ID: 100696161
Gene Symbol: hnrnpub
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein Ub
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 10256 bases
Position: chrGL831143.1:7524349-7534604
Accession: ZDB-GENE-030131-6422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000001589	SAP	PF02037.27	2.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000001588	-	4963	-	ENSONIP00000001589	768 (aa)	-	I3IY99

Gene Model

Click here to download ENSONIG00000001260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000001260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000001260	hnrnpub	98	41.463	ENSONIG00000004004	HNRNPUL1	98	38.407
ENSONIG00000001260	hnrnpub	75	34.812	ENSONIG00000005422	si:ch211-107m4.1	91	34.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000001260	hnrnpub	88	83.333	ENSG00000153187	HNRNPU	99	64.667	Homo_sapiens
ENSONIG00000001260	hnrnpub	100	84.693	ENSAPOG00000017400	hnrnpub	100	85.393	Acanthochromis_polyacanthus
ENSONIG00000001260	hnrnpub	88	83.333	ENSAMEG00000009145	HNRNPU	76	83.333	Ailuropoda_melanoleuca
ENSONIG00000001260	hnrnpub	98	86.554	ENSACIG00000012138	hnrnpub	96	87.849	Amphilophus_citrinellus
ENSONIG00000001260	hnrnpub	100	85.643	ENSAOCG00000015843	hnrnpub	100	86.142	Amphiprion_ocellaris
ENSONIG00000001260	hnrnpub	100	85.643	ENSAPEG00000014679	hnrnpub	100	86.142	Amphiprion_percula
ENSONIG00000001260	hnrnpub	98	84.635	ENSATEG00000016178	hnrnpub	97	85.013	Anabas_testudineus
ENSONIG00000001260	hnrnpub	90	73.810	ENSACAG00000004511	HNRNPU	77	73.810	Anolis_carolinensis
ENSONIG00000001260	hnrnpub	88	83.333	ENSANAG00000033895	-	80	83.333	Aotus_nancymaae
ENSONIG00000001260	hnrnpub	100	95.363	ENSACLG00000008165	hnrnpub	100	95.363	Astatotilapia_calliptera
ENSONIG00000001260	hnrnpub	88	83.333	ENSBTAG00000007606	HNRNPU	78	83.333	Bos_taurus
ENSONIG00000001260	hnrnpub	88	83.333	ENSCJAG00000016914	HNRNPU	78	83.333	Callithrix_jacchus
ENSONIG00000001260	hnrnpub	88	83.333	ENSCAFG00020000918	HNRNPU	80	83.333	Canis_lupus_dingo
ENSONIG00000001260	hnrnpub	88	83.333	ENSCHIG00000004900	HNRNPU	80	83.333	Capra_hircus
ENSONIG00000001260	hnrnpub	88	85.714	ENSCPOG00000011887	HNRNPU	78	85.714	Cavia_porcellus
ENSONIG00000001260	hnrnpub	88	83.333	ENSCCAG00000037859	-	78	83.333	Cebus_capucinus
ENSONIG00000001260	hnrnpub	88	83.333	ENSCATG00000035273	HNRNPU	78	83.333	Cercocebus_atys
ENSONIG00000001260	hnrnpub	88	85.714	ENSCLAG00000007100	HNRNPU	78	85.714	Chinchilla_lanigera
ENSONIG00000001260	hnrnpub	88	83.333	ENSCSAG00000009219	HNRNPU	80	83.333	Chlorocebus_sabaeus
ENSONIG00000001260	hnrnpub	88	83.333	ENSCHOG00000001387	HNRNPU	76	83.333	Choloepus_hoffmanni
ENSONIG00000001260	hnrnpub	99	56.904	ENSCPBG00000009415	HNRNPU	79	66.102	Chrysemys_picta_bellii
ENSONIG00000001260	hnrnpub	88	83.333	ENSCANG00000022780	HNRNPU	77	83.333	Colobus_angolensis_palliatus
ENSONIG00000001260	hnrnpub	92	78.723	ENSCGRG00001020525	Hnrnpu	82	78.723	Cricetulus_griseus_chok1gshd
ENSONIG00000001260	hnrnpub	88	81.977	ENSCSEG00000010804	hnrnpub	100	76.048	Cynoglossus_semilaevis
ENSONIG00000001260	hnrnpub	92	81.481	ENSCVAG00000004280	hnrnpub	95	70.201	Cyprinodon_variegatus
ENSONIG00000001260	hnrnpub	100	61.392	ENSDARG00000015206	hnrnpua	100	60.151	Danio_rerio
ENSONIG00000001260	hnrnpub	100	61.501	ENSDARG00000004735	hnrnpub	100	60.024	Danio_rerio
ENSONIG00000001260	hnrnpub	99	52.963	ENSDNOG00000000215	HNRNPU	99	53.477	Dasypus_novemcinctus
ENSONIG00000001260	hnrnpub	89	80.851	ENSDORG00000015491	Hnrnpu	80	80.851	Dipodomys_ordii
ENSONIG00000001260	hnrnpub	88	83.333	ENSETEG00000014565	HNRNPU	78	83.333	Echinops_telfairi
ENSONIG00000001260	hnrnpub	89	83.333	ENSEASG00005003017	HNRNPU	80	83.333	Equus_asinus_asinus
ENSONIG00000001260	hnrnpub	89	83.333	ENSECAG00000007955	HNRNPU	80	83.333	Equus_caballus
ENSONIG00000001260	hnrnpub	100	72.577	ENSELUG00000010733	hnrnpub	100	72.695	Esox_lucius
ENSONIG00000001260	hnrnpub	88	83.333	ENSFCAG00000002156	HNRNPU	79	83.333	Felis_catus
ENSONIG00000001260	hnrnpub	98	60.526	ENSFDAG00000006026	HNRNPU	99	85.714	Fukomys_damarensis
ENSONIG00000001260	hnrnpub	100	77.101	ENSFHEG00000022639	hnrnpub	100	78.928	Fundulus_heteroclitus
ENSONIG00000001260	hnrnpub	100	70.120	ENSGMOG00000001755	hnrnpub	99	70.146	Gadus_morhua
ENSONIG00000001260	hnrnpub	76	68.966	ENSGALG00000010671	HNRNPU	78	68.966	Gallus_gallus
ENSONIG00000001260	hnrnpub	88	78.641	ENSGACG00000004679	hnrnpub	99	72.664	Gasterosteus_aculeatus
ENSONIG00000001260	hnrnpub	91	83.333	ENSGGOG00000004061	HNRNPU	81	83.333	Gorilla_gorilla
ENSONIG00000001260	hnrnpub	100	95.489	ENSHBUG00000012290	hnrnpub	100	95.489	Haplochromis_burtoni
ENSONIG00000001260	hnrnpub	96	85.714	ENSHGLG00000010594	-	80	85.714	Heterocephalus_glaber_female
ENSONIG00000001260	hnrnpub	93	85.714	ENSHGLG00100015093	HNRNPU	99	74.138	Heterocephalus_glaber_male
ENSONIG00000001260	hnrnpub	88	76.822	ENSHCOG00000020091	hnrnpub	83	79.651	Hippocampus_comes
ENSONIG00000001260	hnrnpub	86	71.622	ENSIPUG00000007749	hnrnpu	100	64.914	Ictalurus_punctatus
ENSONIG00000001260	hnrnpub	89	78.723	ENSJJAG00000011371	Hnrnpu	79	78.723	Jaculus_jaculus
ENSONIG00000001260	hnrnpub	100	79.829	ENSKMAG00000004532	hnrnpub	100	81.907	Kryptolebias_marmoratus
ENSONIG00000001260	hnrnpub	88	88.970	ENSLBEG00000022520	hnrnpub	100	83.354	Labrus_bergylta
ENSONIG00000001260	hnrnpub	91	82.609	ENSLACG00000017463	HNRNPU	80	82.609	Latimeria_chalumnae
ENSONIG00000001260	hnrnpub	91	93.478	ENSLOCG00000016652	hnrnpua	78	93.478	Lepisosteus_oculatus
ENSONIG00000001260	hnrnpub	88	83.333	ENSLAFG00000021377	HNRNPU	81	83.333	Loxodonta_africana
ENSONIG00000001260	hnrnpub	88	83.333	ENSMFAG00000037308	HNRNPU	78	83.333	Macaca_fascicularis
ENSONIG00000001260	hnrnpub	88	83.333	ENSMMUG00000021098	HNRNPU	80	83.333	Macaca_mulatta
ENSONIG00000001260	hnrnpub	88	83.333	ENSMNEG00000043645	HNRNPU	78	83.333	Macaca_nemestrina
ENSONIG00000001260	hnrnpub	100	85.590	ENSMAMG00000007196	hnrnpub	100	85.839	Mastacembelus_armatus
ENSONIG00000001260	hnrnpub	100	95.363	ENSMZEG00005003185	hnrnpub	100	95.363	Maylandia_zebra
ENSONIG00000001260	hnrnpub	92	78.723	ENSMAUG00000008842	Hnrnpu	82	78.723	Mesocricetus_auratus
ENSONIG00000001260	hnrnpub	88	83.333	ENSMICG00000004616	HNRNPU	78	83.333	Microcebus_murinus
ENSONIG00000001260	hnrnpub	91	78.723	ENSMOCG00000015623	Hnrnpu	81	78.723	Microtus_ochrogaster
ENSONIG00000001260	hnrnpub	88	83.333	ENSMODG00000006515	HNRNPU	77	83.333	Monodelphis_domestica
ENSONIG00000001260	hnrnpub	96	85.436	ENSMALG00000018243	hnrnpub	98	85.826	Monopterus_albus
ENSONIG00000001260	hnrnpub	89	78.723	MGP_CAROLIEiJ_G0014962	Hnrnpu	81	78.723	Mus_caroli
ENSONIG00000001260	hnrnpub	89	78.723	ENSMUSG00000039630	Hnrnpu	81	78.723	Mus_musculus
ENSONIG00000001260	hnrnpub	89	78.723	MGP_PahariEiJ_G0028193	Hnrnpu	81	78.723	Mus_pahari
ENSONIG00000001260	hnrnpub	89	78.723	MGP_SPRETEiJ_G0015761	Hnrnpu	81	78.723	Mus_spretus
ENSONIG00000001260	hnrnpub	88	80.952	ENSMLUG00000000475	HNRNPU	86	57.055	Myotis_lucifugus
ENSONIG00000001260	hnrnpub	89	78.723	ENSNGAG00000019075	Hnrnpu	81	78.723	Nannospalax_galili
ENSONIG00000001260	hnrnpub	100	95.238	ENSNBRG00000017855	hnrnpub	100	95.238	Neolamprologus_brichardi
ENSONIG00000001260	hnrnpub	82	83.333	ENSMEUG00000000541	HNRNPU	77	83.333	Notamacropus_eugenii
ENSONIG00000001260	hnrnpub	87	83.333	ENSOCUG00000014469	HNRNPU	72	83.333	Oryctolagus_cuniculus
ENSONIG00000001260	hnrnpub	100	81.671	ENSORLG00000016114	hnrnpub	100	82.170	Oryzias_latipes
ENSONIG00000001260	hnrnpub	100	80.923	ENSORLG00020005363	hnrnpub	100	82.668	Oryzias_latipes_hni
ENSONIG00000001260	hnrnpub	100	80.697	ENSORLG00015001190	hnrnpub	100	81.943	Oryzias_latipes_hsok
ENSONIG00000001260	hnrnpub	100	81.579	ENSOMEG00000014951	hnrnpub	100	81.579	Oryzias_melastigma
ENSONIG00000001260	hnrnpub	88	83.333	ENSOGAG00000014024	HNRNPU	80	83.333	Otolemur_garnettii
ENSONIG00000001260	hnrnpub	88	83.333	ENSOARG00000004985	HNRNPU	86	83.333	Ovis_aries
ENSONIG00000001260	hnrnpub	88	83.333	ENSPPAG00000038652	HNRNPU	81	83.333	Pan_paniscus
ENSONIG00000001260	hnrnpub	91	83.333	ENSPPRG00000002662	HNRNPU	78	83.333	Panthera_pardus
ENSONIG00000001260	hnrnpub	88	83.333	ENSPTRG00000002182	HNRNPU	81	83.333	Pan_troglodytes
ENSONIG00000001260	hnrnpub	88	83.333	ENSPANG00000011643	HNRNPU	80	83.333	Papio_anubis
ENSONIG00000001260	hnrnpub	100	67.805	ENSPKIG00000022332	hnrnpub	100	66.830	Paramormyrops_kingsleyae
ENSONIG00000001260	hnrnpub	100	66.667	ENSPKIG00000006885	hnrnpua	100	65.735	Paramormyrops_kingsleyae
ENSONIG00000001260	hnrnpub	88	83.333	ENSPCIG00000008657	HNRNPU	77	83.333	Phascolarctos_cinereus
ENSONIG00000001260	hnrnpub	100	79.804	ENSPFOG00000002908	hnrnpub	100	79.804	Poecilia_formosa
ENSONIG00000001260	hnrnpub	100	79.315	ENSPLAG00000004160	hnrnpub	100	79.559	Poecilia_latipinna
ENSONIG00000001260	hnrnpub	98	56.571	ENSPCOG00000003883	-	82	80.952	Propithecus_coquereli
ENSONIG00000001260	hnrnpub	88	83.333	ENSPCOG00000018655	-	81	83.333	Propithecus_coquereli
ENSONIG00000001260	hnrnpub	88	83.333	ENSPVAG00000002581	HNRNPU	78	83.333	Pteropus_vampyrus
ENSONIG00000001260	hnrnpub	100	95.739	ENSPNYG00000021642	hnrnpub	100	95.739	Pundamilia_nyererei
ENSONIG00000001260	hnrnpub	100	66.341	ENSPNAG00000001055	hnrnpub	100	66.135	Pygocentrus_nattereri
ENSONIG00000001260	hnrnpub	90	53.374	ENSRNOG00000033790	Hnrnpu	81	78.723	Rattus_norvegicus
ENSONIG00000001260	hnrnpub	99	49.427	ENSRBIG00000031519	HNRNPU	98	54.746	Rhinopithecus_bieti
ENSONIG00000001260	hnrnpub	88	83.333	ENSRROG00000041642	HNRNPU	81	83.333	Rhinopithecus_roxellana
ENSONIG00000001260	hnrnpub	100	67.476	ENSSFOG00015001124	hnrnpub	100	65.981	Scleropages_formosus
ENSONIG00000001260	hnrnpub	89	71.659	ENSSFOG00015019004	hnrnpu	98	70.710	Scleropages_formosus
ENSONIG00000001260	hnrnpub	96	85.652	ENSSMAG00000003607	hnrnpub	100	78.359	Scophthalmus_maximus
ENSONIG00000001260	hnrnpub	100	84.804	ENSSDUG00000005912	hnrnpub	100	84.681	Seriola_dumerili
ENSONIG00000001260	hnrnpub	88	90.497	ENSSLDG00000004899	hnrnpub	100	83.659	Seriola_lalandi_dorsalis
ENSONIG00000001260	hnrnpub	90	82.927	ENSSPUG00000011393	HNRNPU	79	83.333	Sphenodon_punctatus
ENSONIG00000001260	hnrnpub	100	85.430	ENSSPAG00000011853	hnrnpub	100	85.554	Stegastes_partitus
ENSONIG00000001260	hnrnpub	88	83.333	ENSSSCG00000010877	HNRNPU	80	83.333	Sus_scrofa
ENSONIG00000001260	hnrnpub	100	76.801	ENSTRUG00000007759	hnrnpub	100	78.117	Takifugu_rubripes
ENSONIG00000001260	hnrnpub	100	75.945	ENSTNIG00000009725	hnrnpub	100	77.330	Tetraodon_nigroviridis
ENSONIG00000001260	hnrnpub	88	85.000	ENSUAMG00000021120	HNRNPU	78	83.333	Ursus_americanus
ENSONIG00000001260	hnrnpub	88	74.419	ENSUMAG00000012322	HNRNPU	81	74.419	Ursus_maritimus
ENSONIG00000001260	hnrnpub	81	83.333	ENSVPAG00000010520	HNRNPU	81	83.333	Vicugna_pacos
ENSONIG00000001260	hnrnpub	88	83.333	ENSVVUG00000026524	HNRNPU	80	83.333	Vulpes_vulpes
ENSONIG00000001260	hnrnpub	99	49.522	ENSXETG00000011386	hnrnpu	80	84.783	Xenopus_tropicalis
ENSONIG00000001260	hnrnpub	100	79.487	ENSXMAG00000010356	hnrnpub	100	79.487	Xiphophorus_maculatus