EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000001292 (Gene tree)
Gene ID: -
Gene Symbol: gpatch8
Alias: -
Full Name: G patch domain containing 8
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 26947 bases
Position: chrGL831149.1:3096891-3123837
Accession: ZDB-GENE-030131-6966
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000001632	zf-C2H2_jaz	PF12171.8	4e-06	1	1
ENSONIP00000001631	zf-C2H2_jaz	PF12171.8	4.2e-06	1	1
ENSONIP00000001631	G-patch	PF01585.23	3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000001630	-	4347	-	ENSONIP00000001631	1448 (aa)	-	I3IYE1
ENSONIT00000001631	-	4825	-	ENSONIP00000001632	1372 (aa)	-	I3IYE2

Gene Model

Click here to download ENSONIG00000001292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000001292's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000001292	gpatch8	100	88.945	ENSAPOG00000023938	gpatch8	100	86.355	Acanthochromis_polyacanthus
ENSONIG00000001292	gpatch8	99	93.091	ENSACIG00000012241	gpatch8	100	89.900	Amphilophus_citrinellus
ENSONIG00000001292	gpatch8	100	88.509	ENSAOCG00000018102	gpatch8	100	85.886	Amphiprion_ocellaris
ENSONIG00000001292	gpatch8	100	88.582	ENSAPEG00000016776	gpatch8	100	85.953	Amphiprion_percula
ENSONIG00000001292	gpatch8	100	83.709	ENSATEG00000003247	gpatch8	100	81.204	Anabas_testudineus
ENSONIG00000001292	gpatch8	100	97.741	ENSACLG00000004165	gpatch8	100	94.236	Astatotilapia_calliptera
ENSONIG00000001292	gpatch8	55	42.395	ENSCPBG00000008955	GPATCH8	53	50.423	Chrysemys_picta_bellii
ENSONIG00000001292	gpatch8	100	79.390	ENSCSEG00000021277	gpatch8	100	77.741	Cynoglossus_semilaevis
ENSONIG00000001292	gpatch8	100	81.187	ENSCVAG00000013477	gpatch8	100	79.627	Cyprinodon_variegatus
ENSONIG00000001292	gpatch8	100	61.209	ENSDARG00000059768	gpatch8	56	58.953	Danio_rerio
ENSONIG00000001292	gpatch8	100	63.245	ENSELUG00000019920	gpatch8	57	62.976	Esox_lucius
ENSONIG00000001292	gpatch8	55	70.264	ENSFHEG00000005791	gpatch8	100	78.424	Fundulus_heteroclitus
ENSONIG00000001292	gpatch8	100	81.132	ENSGAFG00000018138	gpatch8	100	79.437	Gambusia_affinis
ENSONIG00000001292	gpatch8	100	97.891	ENSHBUG00000002669	gpatch8	97	97.891	Haplochromis_burtoni
ENSONIG00000001292	gpatch8	73	56.942	ENSHGLG00100010738	GPATCH8	61	65.455	Heterocephalus_glaber_male
ENSONIG00000001292	gpatch8	100	70.728	ENSHCOG00000017518	gpatch8	100	69.893	Hippocampus_comes
ENSONIG00000001292	gpatch8	59	57.982	ENSIPUG00000015431	gpatch8	55	60.165	Ictalurus_punctatus
ENSONIG00000001292	gpatch8	100	81.463	ENSKMAG00000018364	gpatch8	100	78.947	Kryptolebias_marmoratus
ENSONIG00000001292	gpatch8	100	81.304	ENSLBEG00000023352	gpatch8	100	80.107	Labrus_bergylta
ENSONIG00000001292	gpatch8	60	88.571	ENSLOCG00000012265	gpatch8	72	81.538	Lepisosteus_oculatus
ENSONIG00000001292	gpatch8	100	86.192	ENSMAMG00000001618	gpatch8	100	83.628	Mastacembelus_armatus
ENSONIG00000001292	gpatch8	100	97.668	ENSMZEG00005022584	gpatch8	100	94.236	Maylandia_zebra
ENSONIG00000001292	gpatch8	100	83.116	ENSMALG00000004204	gpatch8	100	79.133	Monopterus_albus
ENSONIG00000001292	gpatch8	50	66.049	ENSMLUG00000013840	GPATCH8	52	67.089	Myotis_lucifugus
ENSONIG00000001292	gpatch8	100	98.178	ENSNBRG00000016402	gpatch8	100	94.504	Neolamprologus_brichardi
ENSONIG00000001292	gpatch8	57	63.910	ENSOCUG00000003291	GPATCH8	54	67.480	Oryctolagus_cuniculus
ENSONIG00000001292	gpatch8	55	70.261	ENSORLG00000028497	gpatch8	100	76.892	Oryzias_latipes
ENSONIG00000001292	gpatch8	96	75.416	ENSORLG00020006656	gpatch8	100	77.040	Oryzias_latipes_hni
ENSONIG00000001292	gpatch8	55	70.261	ENSORLG00015019797	gpatch8	100	77.209	Oryzias_latipes_hsok
ENSONIG00000001292	gpatch8	55	69.203	ENSOMEG00000023809	gpatch8	100	77.297	Oryzias_melastigma
ENSONIG00000001292	gpatch8	61	52.683	ENSPKIG00000018753	gpatch8	56	53.920	Paramormyrops_kingsleyae
ENSONIG00000001292	gpatch8	55	56.473	ENSPKIG00000004860	GPATCH8	54	56.059	Paramormyrops_kingsleyae
ENSONIG00000001292	gpatch8	100	75.937	ENSPMGG00000000730	gpatch8	99	74.251	Periophthalmus_magnuspinnatus
ENSONIG00000001292	gpatch8	100	81.232	ENSPFOG00000014833	gpatch8	100	79.799	Poecilia_formosa
ENSONIG00000001292	gpatch8	100	81.232	ENSPLAG00000001035	gpatch8	100	79.799	Poecilia_latipinna
ENSONIG00000001292	gpatch8	100	81.449	ENSPMEG00000024032	gpatch8	100	79.732	Poecilia_mexicana
ENSONIG00000001292	gpatch8	100	81.304	ENSPREG00000008911	gpatch8	100	79.333	Poecilia_reticulata
ENSONIG00000001292	gpatch8	100	97.813	ENSPNYG00000009426	gpatch8	100	94.303	Pundamilia_nyererei
ENSONIG00000001292	gpatch8	59	59.307	ENSPNAG00000016200	gpatch8	58	62.284	Pygocentrus_nattereri
ENSONIG00000001292	gpatch8	55	56.318	ENSSFOG00015021377	-	55	56.543	Scleropages_formosus
ENSONIG00000001292	gpatch8	55	56.169	ENSSFOG00015004299	GPATCH8	55	58.333	Scleropages_formosus
ENSONIG00000001292	gpatch8	100	86.782	ENSSDUG00000018065	gpatch8	100	83.644	Seriola_dumerili
ENSONIG00000001292	gpatch8	100	87.274	ENSSLDG00000009225	gpatch8	100	84.897	Seriola_lalandi_dorsalis
ENSONIG00000001292	gpatch8	50	42.083	ENSSPUG00000011251	GPATCH8	51	47.268	Sphenodon_punctatus
ENSONIG00000001292	gpatch8	100	88.873	ENSSPAG00000011368	gpatch8	100	86.087	Stegastes_partitus
ENSONIG00000001292	gpatch8	100	76.862	ENSTRUG00000020474	gpatch8	100	76.021	Takifugu_rubripes
ENSONIG00000001292	gpatch8	58	63.396	ENSTBEG00000009486	GPATCH8	55	66.667	Tupaia_belangeri
ENSONIG00000001292	gpatch8	100	81.273	ENSXCOG00000016680	gpatch8	100	79.200	Xiphophorus_couchianus
ENSONIG00000001292	gpatch8	100	80.983	ENSXMAG00000009217	gpatch8	100	79.105	Xiphophorus_maculatus