EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000001460 (Gene tree)
Gene ID: 100709744
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 2135 bases
Position: chrGL831385.1:443927-446061
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000001834	RNA_pol_3_Rpc31	PF11705.8	2.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000001833	-	669	-	ENSONIP00000001834	222 (aa)	-	I3IYZ4

Gene Model

Click here to download ENSONIG00000001460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000001460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000001460	-	100	42.035	ENSONIG00000011803	-	100	38.938

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000001460	-	98	73.543	ENSAPOG00000021349	-	100	69.058	Acanthochromis_polyacanthus
ENSONIG00000001460	-	98	57.466	ENSAOCG00000023705	-	100	57.826	Amphiprion_ocellaris
ENSONIG00000001460	-	98	73.214	ENSAPEG00000012672	-	100	69.196	Amphiprion_percula
ENSONIG00000001460	-	98	76.606	ENSACLG00000016072	-	100	76.606	Astatotilapia_calliptera
ENSONIG00000001460	-	96	54.054	ENSFHEG00000013634	-	99	61.261	Fundulus_heteroclitus
ENSONIG00000001460	-	98	91.928	ENSHBUG00000009915	-	100	91.928	Haplochromis_burtoni
ENSONIG00000001460	-	94	69.545	ENSLBEG00000020028	-	99	64.758	Labrus_bergylta
ENSONIG00000001460	-	98	74.888	ENSMAMG00000017037	-	100	74.888	Mastacembelus_armatus
ENSONIG00000001460	-	98	91.928	ENSMZEG00005010079	-	100	91.928	Maylandia_zebra
ENSONIG00000001460	-	99	76.577	ENSNBRG00000008808	-	96	76.577	Neolamprologus_brichardi
ENSONIG00000001460	-	90	59.204	ENSORLG00000020581	-	100	48.908	Oryzias_latipes
ENSONIG00000001460	-	90	57.921	ENSORLG00015013774	-	100	55.455	Oryzias_latipes_hsok
ENSONIG00000001460	-	91	68.812	ENSPFOG00000014955	-	100	67.580	Poecilia_formosa
ENSONIG00000001460	-	91	64.356	ENSPLAG00000018896	-	100	62.100	Poecilia_latipinna
ENSONIG00000001460	-	91	68.812	ENSPMEG00000000239	-	100	67.580	Poecilia_mexicana
ENSONIG00000001460	-	91	57.870	ENSPREG00000015562	-	100	59.574	Poecilia_reticulata
ENSONIG00000001460	-	98	76.233	ENSSDUG00000014360	-	100	76.233	Seriola_dumerili
ENSONIG00000001460	-	98	70.588	ENSSPAG00000010477	-	99	72.072	Stegastes_partitus
ENSONIG00000001460	-	99	56.951	ENSTNIG00000002936	-	99	55.605	Tetraodon_nigroviridis