EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000001520 (Gene tree)
Gene ID: 100694451
Gene Symbol: snrnp48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 7178 bases
Position: chrGL831341.1:779581-786758
Accession: 100694451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000001900	zf-U11-48K	PF05253.12	7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000001899	-	1742	-	ENSONIP00000001900	342 (aa)	XP_003456482	I3IZ60

Gene Model

Click here to download ENSONIG00000001520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000001520's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000001520	snrnp48	82	45.675	ENSG00000168566	SNRNP48	74	47.656	Homo_sapiens
ENSONIG00000001520	snrnp48	94	82.609	ENSAPOG00000021430	snrnp48	93	82.911	Acanthochromis_polyacanthus
ENSONIG00000001520	snrnp48	95	43.391	ENSAMEG00000017349	SNRNP48	97	42.151	Ailuropoda_melanoleuca
ENSONIG00000001520	snrnp48	92	81.013	ENSACIG00000002032	snrnp48	93	81.013	Amphilophus_citrinellus
ENSONIG00000001520	snrnp48	94	81.677	ENSAOCG00000010562	snrnp48	93	81.646	Amphiprion_ocellaris
ENSONIG00000001520	snrnp48	94	81.677	ENSAPEG00000003231	snrnp48	93	81.013	Amphiprion_percula
ENSONIG00000001520	snrnp48	90	81.672	ENSATEG00000020210	snrnp48	94	80.317	Anabas_testudineus
ENSONIG00000001520	snrnp48	80	48.639	ENSACAG00000002811	SNRNP48	85	48.540	Anolis_carolinensis
ENSONIG00000001520	snrnp48	82	46.021	ENSANAG00000033538	SNRNP48	74	48.047	Aotus_nancymaae
ENSONIG00000001520	snrnp48	93	57.632	ENSAMXG00000015309	snrnp48	95	58.621	Astyanax_mexicanus
ENSONIG00000001520	snrnp48	97	40.000	ENSBTAG00000001123	SNRNP48	98	42.775	Bos_taurus
ENSONIG00000001520	snrnp48	82	45.833	ENSCJAG00000021330	SNRNP48	76	47.876	Callithrix_jacchus
ENSONIG00000001520	snrnp48	94	42.059	ENSCAFG00000009574	SNRNP48	64	46.360	Canis_familiaris
ENSONIG00000001520	snrnp48	96	41.618	ENSCAFG00020013203	SNRNP48	76	46.360	Canis_lupus_dingo
ENSONIG00000001520	snrnp48	90	41.493	ENSCHIG00000015216	SNRNP48	76	47.510	Capra_hircus
ENSONIG00000001520	snrnp48	83	45.051	ENSTSYG00000000698	SNRNP48	75	46.923	Carlito_syrichta
ENSONIG00000001520	snrnp48	86	43.949	ENSCAPG00000006768	SNRNP48	73	48.889	Cavia_aperea
ENSONIG00000001520	snrnp48	96	43.143	ENSCPOG00000007910	SNRNP48	92	34.161	Cavia_porcellus
ENSONIG00000001520	snrnp48	80	45.965	ENSCCAG00000035652	SNRNP48	96	44.073	Cebus_capucinus
ENSONIG00000001520	snrnp48	95	42.229	ENSCATG00000033947	SNRNP48	84	39.837	Cercocebus_atys
ENSONIG00000001520	snrnp48	96	41.643	ENSCLAG00000003765	SNRNP48	96	45.317	Chinchilla_lanigera
ENSONIG00000001520	snrnp48	82	46.021	ENSCSAG00000007409	SNRNP48	74	48.047	Chlorocebus_sabaeus
ENSONIG00000001520	snrnp48	82	44.481	ENSCPBG00000019146	SNRNP48	90	45.139	Chrysemys_picta_bellii
ENSONIG00000001520	snrnp48	82	46.021	ENSCANG00000030017	SNRNP48	74	48.047	Colobus_angolensis_palliatus
ENSONIG00000001520	snrnp48	95	41.026	ENSCGRG00001001076	-	96	43.769	Cricetulus_griseus_chok1gshd
ENSONIG00000001520	snrnp48	84	40.000	ENSCGRG00001008805	-	88	40.000	Cricetulus_griseus_chok1gshd
ENSONIG00000001520	snrnp48	95	41.026	ENSCGRG00000007781	Snrnp48	96	43.769	Cricetulus_griseus_crigri
ENSONIG00000001520	snrnp48	94	69.159	ENSCSEG00000000722	snrnp48	90	69.716	Cynoglossus_semilaevis
ENSONIG00000001520	snrnp48	91	79.299	ENSCVAG00000019829	snrnp48	81	79.299	Cyprinodon_variegatus
ENSONIG00000001520	snrnp48	93	51.376	ENSDARG00000039989	snrnp48	96	53.374	Danio_rerio
ENSONIG00000001520	snrnp48	84	46.128	ENSDNOG00000014978	SNRNP48	92	40.310	Dasypus_novemcinctus
ENSONIG00000001520	snrnp48	96	42.297	ENSDORG00000015140	Snrnp48	93	43.865	Dipodomys_ordii
ENSONIG00000001520	snrnp48	95	39.943	ENSEASG00005012021	SNRNP48	97	42.730	Equus_asinus_asinus
ENSONIG00000001520	snrnp48	82	44.983	ENSECAG00000026937	SNRNP48	95	43.558	Equus_caballus
ENSONIG00000001520	snrnp48	87	60.772	ENSELUG00000009766	snrnp48	76	63.273	Esox_lucius
ENSONIG00000001520	snrnp48	82	45.862	ENSFCAG00000018853	SNRNP48	74	47.860	Felis_catus
ENSONIG00000001520	snrnp48	68	56.067	ENSFALG00000007797	SNRNP48	90	49.301	Ficedula_albicollis
ENSONIG00000001520	snrnp48	96	42.045	ENSFDAG00000009231	SNRNP48	93	44.615	Fukomys_damarensis
ENSONIG00000001520	snrnp48	65	82.353	ENSFHEG00000014647	snrnp48	93	80.224	Fundulus_heteroclitus
ENSONIG00000001520	snrnp48	89	61.059	ENSGMOG00000018599	-	99	60.625	Gadus_morhua
ENSONIG00000001520	snrnp48	75	52.652	ENSGALG00000013005	SNRNP48	88	51.515	Gallus_gallus
ENSONIG00000001520	snrnp48	94	75.153	ENSGAFG00000021639	snrnp48	94	75.389	Gambusia_affinis
ENSONIG00000001520	snrnp48	73	77.108	ENSGACG00000017756	-	96	71.207	Gasterosteus_aculeatus
ENSONIG00000001520	snrnp48	82	44.156	ENSGAGG00000000865	SNRNP48	96	44.407	Gopherus_agassizii
ENSONIG00000001520	snrnp48	82	46.021	ENSGGOG00000013220	SNRNP48	74	48.047	Gorilla_gorilla
ENSONIG00000001520	snrnp48	100	96.793	ENSHBUG00000017066	snrnp48	100	96.793	Haplochromis_burtoni
ENSONIG00000001520	snrnp48	84	45.238	ENSHGLG00000015241	SNRNP48	96	43.807	Heterocephalus_glaber_female
ENSONIG00000001520	snrnp48	84	45.238	ENSHGLG00100010027	SNRNP48	96	43.807	Heterocephalus_glaber_male
ENSONIG00000001520	snrnp48	74	75.099	ENSHCOG00000014066	snrnp48	93	69.659	Hippocampus_comes
ENSONIG00000001520	snrnp48	84	45.918	ENSSTOG00000014635	SNRNP48	76	47.893	Ictidomys_tridecemlineatus
ENSONIG00000001520	snrnp48	96	41.360	ENSJJAG00000011495	Snrnp48	98	43.064	Jaculus_jaculus
ENSONIG00000001520	snrnp48	94	77.950	ENSKMAG00000016514	snrnp48	93	78.233	Kryptolebias_marmoratus
ENSONIG00000001520	snrnp48	94	77.019	ENSLBEG00000026249	snrnp48	93	76.972	Labrus_bergylta
ENSONIG00000001520	snrnp48	93	46.398	ENSLACG00000003958	SNRNP48	91	47.604	Latimeria_chalumnae
ENSONIG00000001520	snrnp48	81	60.714	ENSLOCG00000004187	snrnp48	92	55.128	Lepisosteus_oculatus
ENSONIG00000001520	snrnp48	97	39.607	ENSLAFG00000011152	SNRNP48	98	41.570	Loxodonta_africana
ENSONIG00000001520	snrnp48	82	46.021	ENSMFAG00000045216	SNRNP48	84	39.837	Macaca_fascicularis
ENSONIG00000001520	snrnp48	82	46.021	ENSMMUG00000014785	SNRNP48	74	48.047	Macaca_mulatta
ENSONIG00000001520	snrnp48	82	46.021	ENSMNEG00000042269	SNRNP48	74	48.047	Macaca_nemestrina
ENSONIG00000001520	snrnp48	82	46.021	ENSMLEG00000034004	SNRNP48	84	39.837	Mandrillus_leucophaeus
ENSONIG00000001520	snrnp48	94	76.087	ENSMAMG00000018673	snrnp48	82	75.710	Mastacembelus_armatus
ENSONIG00000001520	snrnp48	80	49.007	ENSMGAG00000006037	SNRNP48	97	49.135	Meleagris_gallopavo
ENSONIG00000001520	snrnp48	95	41.983	ENSMAUG00000011944	Snrnp48	95	44.099	Mesocricetus_auratus
ENSONIG00000001520	snrnp48	95	41.547	ENSMICG00000012497	SNRNP48	74	47.860	Microcebus_murinus
ENSONIG00000001520	snrnp48	95	43.452	ENSMOCG00000015555	Snrnp48	96	45.062	Microtus_ochrogaster
ENSONIG00000001520	snrnp48	55	84.737	ENSMMOG00000003072	-	60	84.737	Mola_mola
ENSONIG00000001520	snrnp48	82	46.758	ENSMODG00000009996	SNRNP48	88	43.558	Monodelphis_domestica
ENSONIG00000001520	snrnp48	94	79.814	ENSMALG00000005725	snrnp48	93	79.811	Monopterus_albus
ENSONIG00000001520	snrnp48	95	41.311	MGP_CAROLIEiJ_G0018441	Snrnp48	96	44.073	Mus_caroli
ENSONIG00000001520	snrnp48	95	41.311	ENSMUSG00000021431	Snrnp48	95	44.444	Mus_musculus
ENSONIG00000001520	snrnp48	95	41.880	MGP_PahariEiJ_G0019509	Snrnp48	96	44.681	Mus_pahari
ENSONIG00000001520	snrnp48	95	41.311	MGP_SPRETEiJ_G0019321	Snrnp48	95	44.753	Mus_spretus
ENSONIG00000001520	snrnp48	96	43.266	ENSNGAG00000004849	Snrnp48	76	48.846	Nannospalax_galili
ENSONIG00000001520	snrnp48	100	97.368	ENSNBRG00000012127	snrnp48	100	97.368	Neolamprologus_brichardi
ENSONIG00000001520	snrnp48	82	46.021	ENSNLEG00000011667	SNRNP48	74	48.047	Nomascus_leucogenys
ENSONIG00000001520	snrnp48	88	44.795	ENSOPRG00000015471	SNRNP48	78	49.407	Ochotona_princeps
ENSONIG00000001520	snrnp48	54	36.232	ENSOANG00000019888	-	99	37.198	Ornithorhynchus_anatinus
ENSONIG00000001520	snrnp48	78	46.350	ENSOCUG00000005168	SNRNP48	84	47.893	Oryctolagus_cuniculus
ENSONIG00000001520	snrnp48	87	80.471	ENSORLG00000015654	snrnp48	92	79.495	Oryzias_latipes
ENSONIG00000001520	snrnp48	87	80.808	ENSORLG00020015976	snrnp48	79	79.811	Oryzias_latipes_hni
ENSONIG00000001520	snrnp48	87	78.788	ENSORLG00015022379	snrnp48	79	78.864	Oryzias_latipes_hsok
ENSONIG00000001520	snrnp48	92	77.287	ENSOMEG00000022007	snrnp48	93	77.287	Oryzias_melastigma
ENSONIG00000001520	snrnp48	81	45.993	ENSOGAG00000005275	SNRNP48	76	48.031	Otolemur_garnettii
ENSONIG00000001520	snrnp48	66	50.855	ENSOARG00000017319	SNRNP48	90	48.855	Ovis_aries
ENSONIG00000001520	snrnp48	82	46.021	ENSPPAG00000032873	SNRNP48	74	48.047	Pan_paniscus
ENSONIG00000001520	snrnp48	82	45.517	ENSPPRG00000004283	SNRNP48	76	48.276	Panthera_pardus
ENSONIG00000001520	snrnp48	68	49.153	ENSPTIG00000013502	SNRNP48	70	52.217	Panthera_tigris_altaica
ENSONIG00000001520	snrnp48	82	46.021	ENSPTRG00000017703	SNRNP48	74	48.047	Pan_troglodytes
ENSONIG00000001520	snrnp48	82	46.021	ENSPANG00000000771	SNRNP48	84	39.837	Papio_anubis
ENSONIG00000001520	snrnp48	88	57.276	ENSPKIG00000013703	snrnp48	67	56.467	Paramormyrops_kingsleyae
ENSONIG00000001520	snrnp48	84	44.966	ENSPSIG00000002213	SNRNP48	91	46.048	Pelodiscus_sinensis
ENSONIG00000001520	snrnp48	75	66.160	ENSPMGG00000008120	snrnp48	92	66.154	Periophthalmus_magnuspinnatus
ENSONIG00000001520	snrnp48	95	43.064	ENSPEMG00000008872	Snrnp48	96	44.985	Peromyscus_maniculatus_bairdii
ENSONIG00000001520	snrnp48	94	76.687	ENSPFOG00000003578	snrnp48	94	77.259	Poecilia_formosa
ENSONIG00000001520	snrnp48	69	78.390	ENSPLAG00000002290	snrnp48	82	78.390	Poecilia_latipinna
ENSONIG00000001520	snrnp48	94	76.687	ENSPMEG00000018033	snrnp48	94	77.259	Poecilia_mexicana
ENSONIG00000001520	snrnp48	94	75.153	ENSPREG00000018541	snrnp48	94	75.701	Poecilia_reticulata
ENSONIG00000001520	snrnp48	82	45.329	ENSPPYG00000016209	SNRNP48	74	47.266	Pongo_abelii
ENSONIG00000001520	snrnp48	71	37.500	ENSPCAG00000011991	SNRNP48	94	38.281	Procavia_capensis
ENSONIG00000001520	snrnp48	84	44.710	ENSPVAG00000002854	SNRNP48	76	46.154	Pteropus_vampyrus
ENSONIG00000001520	snrnp48	91	97.106	ENSPNYG00000015399	snrnp48	100	97.106	Pundamilia_nyererei
ENSONIG00000001520	snrnp48	95	43.064	ENSRNOG00000013756	Snrnp48	96	44.985	Rattus_norvegicus
ENSONIG00000001520	snrnp48	82	46.021	ENSRBIG00000043856	SNRNP48	80	48.047	Rhinopithecus_bieti
ENSONIG00000001520	snrnp48	82	46.021	ENSRROG00000043229	SNRNP48	74	48.047	Rhinopithecus_roxellana
ENSONIG00000001520	snrnp48	82	46.367	ENSSBOG00000019486	SNRNP48	74	48.438	Saimiri_boliviensis_boliviensis
ENSONIG00000001520	snrnp48	83	47.157	ENSSHAG00000014483	SNRNP48	94	44.578	Sarcophilus_harrisii
ENSONIG00000001520	snrnp48	73	60.687	ENSSFOG00015006610	snrnp48	76	56.386	Scleropages_formosus
ENSONIG00000001520	snrnp48	94	78.882	ENSSDUG00000014953	snrnp48	93	78.864	Seriola_dumerili
ENSONIG00000001520	snrnp48	94	78.882	ENSSLDG00000005989	snrnp48	93	78.864	Seriola_lalandi_dorsalis
ENSONIG00000001520	snrnp48	82	45.724	ENSSPUG00000006257	SNRNP48	84	45.791	Sphenodon_punctatus
ENSONIG00000001520	snrnp48	94	84.112	ENSSPAG00000006454	snrnp48	94	84.177	Stegastes_partitus
ENSONIG00000001520	snrnp48	81	50.495	ENSTGUG00000007575	SNRNP48	91	50.174	Taeniopygia_guttata
ENSONIG00000001520	snrnp48	74	74.118	ENSTRUG00000007031	snrnp48	93	70.938	Takifugu_rubripes
ENSONIG00000001520	snrnp48	99	65.982	ENSTNIG00000012977	-	98	64.431	Tetraodon_nigroviridis
ENSONIG00000001520	snrnp48	76	47.212	ENSTBEG00000015620	SNRNP48	76	47.126	Tupaia_belangeri
ENSONIG00000001520	snrnp48	90	43.030	ENSTTRG00000016715	SNRNP48	96	44.277	Tursiops_truncatus
ENSONIG00000001520	snrnp48	95	43.068	ENSUAMG00000003690	SNRNP48	97	43.881	Ursus_americanus
ENSONIG00000001520	snrnp48	66	49.138	ENSVPAG00000003557	SNRNP48	70	51.724	Vicugna_pacos
ENSONIG00000001520	snrnp48	96	41.618	ENSVVUG00000004996	SNRNP48	76	46.360	Vulpes_vulpes
ENSONIG00000001520	snrnp48	89	43.607	ENSXETG00000020447	snrnp48	93	42.188	Xenopus_tropicalis
ENSONIG00000001520	snrnp48	69	77.637	ENSXCOG00000004478	snrnp48	93	68.847	Xiphophorus_couchianus
ENSONIG00000001520	snrnp48	94	76.074	ENSXMAG00000013595	snrnp48	94	76.636	Xiphophorus_maculatus