EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000001559 (Gene tree)
Gene ID: 100692060
Gene Symbol: raver1
Alias: -
Full Name: ribonucleoprotein%2C PTB-binding 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 9906 bases
Position: chrGL831149.1:4718874-4728779
Accession: ZDB-GENE-050522-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000001949	RRM_1	PF00076.22	2.1e-29	1	2
ENSONIP00000001949	RRM_1	PF00076.22	2.1e-29	2	2
ENSONIP00000001948	RRM_1	PF00076.22	2.3e-29	1	2
ENSONIP00000001948	RRM_1	PF00076.22	2.3e-29	2	2
ENSONIP00000001950	RRM_1	PF00076.22	2.3e-24	1	2
ENSONIP00000001950	RRM_1	PF00076.22	2.3e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000001948	-	1962	-	ENSONIP00000001949	653 (aa)	-	I3IZA9
ENSONIT00000001949	-	927	-	ENSONIP00000001950	309 (aa)	-	I3IZB0
ENSONIT00000001947	-	2046	-	ENSONIP00000001948	681 (aa)	-	I3IZA8

Gene Model

Click here to download ENSONIG00000001559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000001559's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000001559	raver1	78	53.583	ENSONIG00000008808	raver2	98	37.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000001559	raver1	99	51.796	ENSG00000161847	RAVER1	96	51.469	Homo_sapiens
ENSONIG00000001559	raver1	99	84.490	ENSAPOG00000017267	raver1	84	84.490	Acanthochromis_polyacanthus
ENSONIG00000001559	raver1	84	57.490	ENSAMEG00000011738	RAVER1	74	62.500	Ailuropoda_melanoleuca
ENSONIG00000001559	raver1	93	92.683	ENSACIG00000008853	raver1	96	92.683	Amphilophus_citrinellus
ENSONIG00000001559	raver1	99	85.081	ENSAOCG00000005128	raver1	89	85.081	Amphiprion_ocellaris
ENSONIG00000001559	raver1	100	85.044	ENSAPEG00000010854	raver1	92	85.044	Amphiprion_percula
ENSONIG00000001559	raver1	100	83.013	ENSATEG00000021004	raver1	92	83.161	Anabas_testudineus
ENSONIG00000001559	raver1	67	71.981	ENSACAG00000008386	-	77	54.004	Anolis_carolinensis
ENSONIG00000001559	raver1	72	71.875	ENSANAG00000028226	RAVER1	64	60.780	Aotus_nancymaae
ENSONIG00000001559	raver1	99	94.805	ENSACLG00000018492	raver1	92	92.492	Astatotilapia_calliptera
ENSONIG00000001559	raver1	99	68.499	ENSAMXG00000005132	raver1	93	68.398	Astyanax_mexicanus
ENSONIG00000001559	raver1	87	68.254	ENSBTAG00000015721	RAVER1	92	69.318	Bos_taurus
ENSONIG00000001559	raver1	99	51.676	ENSCJAG00000005671	RAVER1	94	50.765	Callithrix_jacchus
ENSONIG00000001559	raver1	99	53.076	ENSCAFG00000017861	RAVER1	94	53.247	Canis_familiaris
ENSONIG00000001559	raver1	99	53.076	ENSCAFG00020024449	RAVER1	96	53.247	Canis_lupus_dingo
ENSONIG00000001559	raver1	99	50.619	ENSCHIG00000006718	RAVER1	96	51.836	Capra_hircus
ENSONIG00000001559	raver1	61	75.000	ENSTSYG00000027107	RAVER1	100	52.141	Carlito_syrichta
ENSONIG00000001559	raver1	79	82.353	ENSCAPG00000002269	RAVER1	79	60.000	Cavia_aperea
ENSONIG00000001559	raver1	78	82.353	ENSCPOG00000001008	RAVER1	76	60.000	Cavia_porcellus
ENSONIG00000001559	raver1	99	51.816	ENSCCAG00000031723	RAVER1	94	51.888	Cebus_capucinus
ENSONIG00000001559	raver1	99	51.318	ENSCATG00000043863	RAVER1	94	51.888	Cercocebus_atys
ENSONIG00000001559	raver1	99	50.759	ENSCLAG00000009336	RAVER1	96	50.902	Chinchilla_lanigera
ENSONIG00000001559	raver1	99	51.318	ENSCSAG00000007317	RAVER1	80	50.836	Chlorocebus_sabaeus
ENSONIG00000001559	raver1	99	51.135	ENSCPBG00000005349	-	96	50.670	Chrysemys_picta_bellii
ENSONIG00000001559	raver1	72	70.982	ENSCANG00000008337	RAVER1	94	50.836	Colobus_angolensis_palliatus
ENSONIG00000001559	raver1	99	51.023	ENSCGRG00001013260	-	78	63.750	Cricetulus_griseus_chok1gshd
ENSONIG00000001559	raver1	99	51.023	ENSCGRG00000015138	-	78	63.750	Cricetulus_griseus_crigri
ENSONIG00000001559	raver1	100	75.837	ENSCSEG00000021092	raver1	92	75.837	Cynoglossus_semilaevis
ENSONIG00000001559	raver1	100	78.402	ENSCVAG00000013971	raver1	92	78.319	Cyprinodon_variegatus
ENSONIG00000001559	raver1	100	68.095	ENSDARG00000052617	raver1	91	75.850	Danio_rerio
ENSONIG00000001559	raver1	56	80.392	ENSDNOG00000035742	-	54	60.661	Dasypus_novemcinctus
ENSONIG00000001559	raver1	86	63.325	ENSDORG00000010106	-	97	47.503	Dipodomys_ordii
ENSONIG00000001559	raver1	64	70.854	ENSETEG00000008201	-	63	70.854	Echinops_telfairi
ENSONIG00000001559	raver1	70	44.091	ENSEBUG00000003030	RAVER1	53	38.596	Eptatretus_burgeri
ENSONIG00000001559	raver1	72	72.321	ENSEASG00005010544	-	68	68.883	Equus_asinus_asinus
ENSONIG00000001559	raver1	87	59.350	ENSECAG00000024966	RAVER1	74	61.250	Equus_caballus
ENSONIG00000001559	raver1	100	72.035	ENSELUG00000023287	raver1	92	72.018	Esox_lucius
ENSONIG00000001559	raver1	99	50.205	ENSFCAG00000009435	RAVER1	74	62.500	Felis_catus
ENSONIG00000001559	raver1	99	50.754	ENSFDAG00000015113	RAVER1	96	50.897	Fukomys_damarensis
ENSONIG00000001559	raver1	94	79.381	ENSFHEG00000001653	raver1	96	79.381	Fundulus_heteroclitus
ENSONIG00000001559	raver1	100	68.678	ENSGMOG00000003649	raver1	98	68.678	Gadus_morhua
ENSONIG00000001559	raver1	72	43.111	ENSGALG00000050608	-	51	39.798	Gallus_gallus
ENSONIG00000001559	raver1	99	77.974	ENSGAFG00000015944	raver1	91	77.974	Gambusia_affinis
ENSONIG00000001559	raver1	92	81.633	ENSGACG00000013818	raver1	83	84.242	Gasterosteus_aculeatus
ENSONIG00000001559	raver1	86	68.449	ENSGAGG00000011748	-	96	68.097	Gopherus_agassizii
ENSONIG00000001559	raver1	99	51.657	ENSGGOG00000006015	RAVER1	94	51.329	Gorilla_gorilla
ENSONIG00000001559	raver1	99	95.130	ENSHBUG00000021210	raver1	92	92.342	Haplochromis_burtoni
ENSONIG00000001559	raver1	99	51.381	ENSHGLG00000015460	RAVER1	96	50.549	Heterocephalus_glaber_female
ENSONIG00000001559	raver1	99	51.381	ENSHGLG00100000812	RAVER1	96	50.549	Heterocephalus_glaber_male
ENSONIG00000001559	raver1	99	80.000	ENSHCOG00000000449	raver1	90	76.036	Hippocampus_comes
ENSONIG00000001559	raver1	100	69.925	ENSIPUG00000013153	raver1	92	69.440	Ictalurus_punctatus
ENSONIG00000001559	raver1	99	51.657	ENSSTOG00000003241	RAVER1	96	52.162	Ictidomys_tridecemlineatus
ENSONIG00000001559	raver1	99	51.507	ENSJJAG00000018219	-	96	51.801	Jaculus_jaculus
ENSONIG00000001559	raver1	99	84.142	ENSKMAG00000017355	raver1	92	81.525	Kryptolebias_marmoratus
ENSONIG00000001559	raver1	99	83.442	ENSLBEG00000008268	raver1	87	80.929	Labrus_bergylta
ENSONIG00000001559	raver1	93	49.282	ENSLACG00000005809	-	79	61.250	Latimeria_chalumnae
ENSONIG00000001559	raver1	95	69.595	ENSLOCG00000007500	raver1	93	61.180	Lepisosteus_oculatus
ENSONIG00000001559	raver1	79	77.193	ENSLAFG00000003664	-	91	77.193	Loxodonta_africana
ENSONIG00000001559	raver1	99	51.456	ENSMFAG00000037977	RAVER1	94	51.753	Macaca_fascicularis
ENSONIG00000001559	raver1	99	51.318	ENSMMUG00000014897	RAVER1	94	51.888	Macaca_mulatta
ENSONIG00000001559	raver1	99	51.318	ENSMNEG00000028390	RAVER1	94	51.888	Macaca_nemestrina
ENSONIG00000001559	raver1	99	51.456	ENSMLEG00000041959	RAVER1	94	52.028	Mandrillus_leucophaeus
ENSONIG00000001559	raver1	100	81.406	ENSMAMG00000012059	raver1	92	81.406	Mastacembelus_armatus
ENSONIG00000001559	raver1	99	94.805	ENSMZEG00005019002	raver1	92	93.363	Maylandia_zebra
ENSONIG00000001559	raver1	99	50.887	ENSMAUG00000017948	-	78	63.750	Mesocricetus_auratus
ENSONIG00000001559	raver1	99	53.035	ENSMICG00000010326	RAVER1	96	53.353	Microcebus_murinus
ENSONIG00000001559	raver1	99	51.023	ENSMOCG00000015553	-	77	63.750	Microtus_ochrogaster
ENSONIG00000001559	raver1	99	82.673	ENSMMOG00000012093	raver1	92	81.791	Mola_mola
ENSONIG00000001559	raver1	76	71.610	ENSMODG00000005584	-	85	51.026	Monodelphis_domestica
ENSONIG00000001559	raver1	99	81.169	ENSMALG00000016569	raver1	92	79.941	Monopterus_albus
ENSONIG00000001559	raver1	100	50.536	MGP_CAROLIEiJ_G0031860	-	78	65.000	Mus_caroli
ENSONIG00000001559	raver1	99	50.611	ENSMUSG00000010205	Raver1	78	63.750	Mus_musculus
ENSONIG00000001559	raver1	99	49.593	MGP_PahariEiJ_G0014726	-	78	63.750	Mus_pahari
ENSONIG00000001559	raver1	99	50.475	MGP_SPRETEiJ_G0032984	-	78	63.750	Mus_spretus
ENSONIG00000001559	raver1	71	73.182	ENSMPUG00000006712	RAVER1	74	62.500	Mustela_putorius_furo
ENSONIG00000001559	raver1	99	52.199	ENSMLUG00000012328	RAVER1	96	53.438	Myotis_lucifugus
ENSONIG00000001559	raver1	99	50.559	ENSNGAG00000001260	-	96	50.702	Nannospalax_galili
ENSONIG00000001559	raver1	96	96.959	ENSNBRG00000010139	raver1	92	85.377	Neolamprologus_brichardi
ENSONIG00000001559	raver1	99	51.888	ENSNLEG00000012181	RAVER1	94	51.473	Nomascus_leucogenys
ENSONIG00000001559	raver1	92	51.173	ENSMEUG00000003281	-	79	65.000	Notamacropus_eugenii
ENSONIG00000001559	raver1	71	71.364	ENSODEG00000016260	RAVER1	96	50.483	Octodon_degus
ENSONIG00000001559	raver1	88	58.418	ENSOCUG00000020918	RAVER1	94	50.980	Oryctolagus_cuniculus
ENSONIG00000001559	raver1	99	80.844	ENSORLG00000005458	raver1	92	77.093	Oryzias_latipes
ENSONIG00000001559	raver1	99	80.844	ENSORLG00020004392	raver1	92	78.414	Oryzias_latipes_hni
ENSONIG00000001559	raver1	99	80.844	ENSORLG00015017222	raver1	92	77.533	Oryzias_latipes_hsok
ENSONIG00000001559	raver1	99	82.143	ENSOMEG00000023956	raver1	91	76.480	Oryzias_melastigma
ENSONIG00000001559	raver1	99	51.247	ENSOGAG00000011071	RAVER1	72	77.193	Otolemur_garnettii
ENSONIG00000001559	raver1	78	82.353	ENSOARG00000015886	RAVER1	72	77.193	Ovis_aries
ENSONIG00000001559	raver1	99	51.796	ENSPPAG00000002611	RAVER1	94	51.469	Pan_paniscus
ENSONIG00000001559	raver1	99	51.314	ENSPPRG00000009912	RAVER1	74	62.500	Panthera_pardus
ENSONIG00000001559	raver1	99	51.796	ENSPTRG00000010466	RAVER1	94	51.469	Pan_troglodytes
ENSONIG00000001559	raver1	99	51.318	ENSPANG00000004122	RAVER1	94	51.748	Papio_anubis
ENSONIG00000001559	raver1	96	70.820	ENSPKIG00000015863	raver1	95	70.820	Paramormyrops_kingsleyae
ENSONIG00000001559	raver1	93	84.775	ENSPMGG00000001451	raver1	99	81.639	Periophthalmus_magnuspinnatus
ENSONIG00000001559	raver1	99	50.887	ENSPEMG00000016411	-	78	63.750	Peromyscus_maniculatus_bairdii
ENSONIG00000001559	raver1	99	53.936	ENSPCIG00000018695	-	96	53.926	Phascolarctos_cinereus
ENSONIG00000001559	raver1	99	80.323	ENSPFOG00000007016	raver1	92	76.978	Poecilia_formosa
ENSONIG00000001559	raver1	99	80.645	ENSPLAG00000020793	raver1	91	76.389	Poecilia_latipinna
ENSONIG00000001559	raver1	99	80.323	ENSPMEG00000011220	raver1	92	78.770	Poecilia_mexicana
ENSONIG00000001559	raver1	100	78.979	ENSPREG00000006864	raver1	91	77.177	Poecilia_reticulata
ENSONIG00000001559	raver1	99	51.811	ENSPPYG00000010514	RAVER1	80	51.972	Pongo_abelii
ENSONIG00000001559	raver1	99	51.034	ENSPCOG00000026605	RAVER1	74	61.250	Propithecus_coquereli
ENSONIG00000001559	raver1	77	82.353	ENSPVAG00000003689	RAVER1	74	77.193	Pteropus_vampyrus
ENSONIG00000001559	raver1	99	95.130	ENSPNYG00000013284	raver1	92	86.745	Pundamilia_nyererei
ENSONIG00000001559	raver1	100	72.555	ENSPNAG00000015476	raver1	92	71.512	Pygocentrus_nattereri
ENSONIG00000001559	raver1	99	50.340	ENSRNOG00000020710	Raver1	97	48.988	Rattus_norvegicus
ENSONIG00000001559	raver1	99	53.592	ENSRBIG00000034702	RAVER1	94	53.478	Rhinopithecus_bieti
ENSONIG00000001559	raver1	99	53.736	ENSRROG00000031186	RAVER1	94	53.623	Rhinopithecus_roxellana
ENSONIG00000001559	raver1	99	53.669	ENSSBOG00000023423	RAVER1	94	54.136	Saimiri_boliviensis_boliviensis
ENSONIG00000001559	raver1	93	52.870	ENSSHAG00000008181	-	90	52.932	Sarcophilus_harrisii
ENSONIG00000001559	raver1	86	75.281	ENSSFOG00015023666	raver1	96	72.664	Scleropages_formosus
ENSONIG00000001559	raver1	100	81.232	ENSSMAG00000004546	raver1	92	82.991	Scophthalmus_maximus
ENSONIG00000001559	raver1	100	85.044	ENSSDUG00000021063	raver1	92	85.044	Seriola_dumerili
ENSONIG00000001559	raver1	100	85.044	ENSSLDG00000014505	raver1	92	85.044	Seriola_lalandi_dorsalis
ENSONIG00000001559	raver1	100	85.044	ENSSPAG00000000688	raver1	92	85.044	Stegastes_partitus
ENSONIG00000001559	raver1	79	77.193	ENSSSCG00000013650	-	96	53.546	Sus_scrofa
ENSONIG00000001559	raver1	99	78.739	ENSTRUG00000025641	raver1	92	76.652	Takifugu_rubripes
ENSONIG00000001559	raver1	93	82.007	ENSTNIG00000018570	raver1	99	82.007	Tetraodon_nigroviridis
ENSONIG00000001559	raver1	99	52.022	ENSTTRG00000009552	RAVER1	96	51.464	Tursiops_truncatus
ENSONIG00000001559	raver1	99	50.759	ENSUAMG00000020385	RAVER1	74	62.500	Ursus_americanus
ENSONIG00000001559	raver1	99	53.076	ENSVVUG00000028976	RAVER1	94	53.247	Vulpes_vulpes
ENSONIG00000001559	raver1	98	52.471	ENSXETG00000011622	raver1	94	51.901	Xenopus_tropicalis
ENSONIG00000001559	raver1	100	79.063	ENSXCOG00000016368	raver1	92	79.063	Xiphophorus_couchianus
ENSONIG00000001559	raver1	100	79.063	ENSXMAG00000000217	raver1	92	79.063	Xiphophorus_maculatus