EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000001860 (Gene tree)
Gene ID: -
Gene Symbol: npm1a
Alias: -
Full Name: nucleophosmin 1a
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 4967 bases
Position: chrGL831223.1:1242838-1247804
Accession: ZDB-GENE-021028-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000002320	Nucleoplasmin	PF03066.15	2.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000002321	-	1275	-	ENSONIP00000002320	303 (aa)	-	I3J0D0

Gene Model

Click here to download ENSONIG00000001860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000001860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000001860	npm1a	50	33.333	ENSONIG00000009513	npm3	91	32.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000001860	npm1a	98	74.582	ENSAPOG00000002813	npm1a	99	74.086	Acanthochromis_polyacanthus
ENSONIG00000001860	npm1a	94	82.168	ENSACIG00000014201	npm1a	100	81.818	Amphilophus_citrinellus
ENSONIG00000001860	npm1a	89	72.222	ENSAOCG00000004978	npm1a	100	68.148	Amphiprion_ocellaris
ENSONIG00000001860	npm1a	98	75.920	ENSAPEG00000008594	npm1a	99	75.415	Amphiprion_percula
ENSONIG00000001860	npm1a	98	76.623	ENSATEG00000008885	npm1a	99	72.313	Anabas_testudineus
ENSONIG00000001860	npm1a	96	81.164	ENSACLG00000008376	npm1a	96	79.795	Astatotilapia_calliptera
ENSONIG00000001860	npm1a	74	76.852	ENSAMXG00000010155	npm1a	77	76.852	Astyanax_mexicanus
ENSONIG00000001860	npm1a	99	60.726	ENSCSEG00000011165	npm1a	90	85.065	Cynoglossus_semilaevis
ENSONIG00000001860	npm1a	99	66.667	ENSCVAG00000008960	npm1a	99	66.340	Cyprinodon_variegatus
ENSONIG00000001860	npm1a	97	57.483	ENSDARG00000014329	npm1a	92	69.128	Danio_rerio
ENSONIG00000001860	npm1a	97	36.778	ENSEBUG00000012753	npm1a	91	33.537	Eptatretus_burgeri
ENSONIG00000001860	npm1a	99	65.132	ENSELUG00000013705	npm1a	99	63.487	Esox_lucius
ENSONIG00000001860	npm1a	98	70.297	ENSFHEG00000012496	npm1a	99	69.103	Fundulus_heteroclitus
ENSONIG00000001860	npm1a	98	65.461	ENSGAFG00000013059	npm1a	99	65.000	Gambusia_affinis
ENSONIG00000001860	npm1a	98	66.890	ENSGACG00000020319	npm1a	99	62.458	Gasterosteus_aculeatus
ENSONIG00000001860	npm1a	99	85.714	ENSHBUG00000000776	npm1a	100	84.127	Haplochromis_burtoni
ENSONIG00000001860	npm1a	99	52.427	ENSHCOG00000001059	npm1a	99	49.359	Hippocampus_comes
ENSONIG00000001860	npm1a	97	59.736	ENSIPUG00000019452	npm1	99	57.616	Ictalurus_punctatus
ENSONIG00000001860	npm1a	99	67.881	ENSKMAG00000010709	npm1a	99	64.570	Kryptolebias_marmoratus
ENSONIG00000001860	npm1a	98	68.333	ENSLBEG00000008793	npm1a	99	67.000	Labrus_bergylta
ENSONIG00000001860	npm1a	84	50.746	ENSLOCG00000009683	npm1a	98	48.352	Lepisosteus_oculatus
ENSONIG00000001860	npm1a	99	71.569	ENSMAMG00000009344	npm1a	82	70.199	Mastacembelus_armatus
ENSONIG00000001860	npm1a	99	84.076	ENSMZEG00005013717	npm1a	100	84.713	Maylandia_zebra
ENSONIG00000001860	npm1a	93	70.629	ENSMMOG00000007980	npm1a	99	69.580	Mola_mola
ENSONIG00000001860	npm1a	99	66.019	ENSMALG00000001146	npm1a	99	66.013	Monopterus_albus
ENSONIG00000001860	npm1a	99	80.456	ENSNBRG00000013172	npm1a	100	75.000	Neolamprologus_brichardi
ENSONIG00000001860	npm1a	99	68.977	ENSORLG00000010179	npm1a	99	69.307	Oryzias_latipes
ENSONIG00000001860	npm1a	99	68.543	ENSORLG00020020817	npm1a	99	68.874	Oryzias_latipes_hni
ENSONIG00000001860	npm1a	99	68.977	ENSORLG00015003439	npm1a	99	69.307	Oryzias_latipes_hsok
ENSONIG00000001860	npm1a	99	66.667	ENSOMEG00000007083	npm1a	99	65.781	Oryzias_melastigma
ENSONIG00000001860	npm1a	98	54.636	ENSPKIG00000023943	npm1a	99	52.980	Paramormyrops_kingsleyae
ENSONIG00000001860	npm1a	98	53.177	ENSPMGG00000011716	npm1a	93	62.092	Periophthalmus_magnuspinnatus
ENSONIG00000001860	npm1a	98	67.110	ENSPFOG00000019173	npm1a	99	65.333	Poecilia_formosa
ENSONIG00000001860	npm1a	98	67.219	ENSPLAG00000001093	npm1a	99	66.556	Poecilia_latipinna
ENSONIG00000001860	npm1a	98	67.110	ENSPMEG00000012523	npm1a	99	65.333	Poecilia_mexicana
ENSONIG00000001860	npm1a	99	68.092	ENSPREG00000001647	npm1a	99	65.781	Poecilia_reticulata
ENSONIG00000001860	npm1a	99	86.452	ENSPNYG00000019321	npm1a	100	85.806	Pundamilia_nyererei
ENSONIG00000001860	npm1a	97	61.386	ENSPNAG00000026891	npm1a	98	56.291	Pygocentrus_nattereri
ENSONIG00000001860	npm1a	98	61.056	ENSSFOG00015007074	npm1a	99	61.056	Scleropages_formosus
ENSONIG00000001860	npm1a	98	72.848	ENSSMAG00000019090	npm1a	99	72.185	Scophthalmus_maximus
ENSONIG00000001860	npm1a	98	73.026	ENSSDUG00000015609	npm1a	99	71.333	Seriola_dumerili
ENSONIG00000001860	npm1a	98	72.667	ENSSLDG00000017849	npm1a	99	73.267	Seriola_lalandi_dorsalis
ENSONIG00000001860	npm1a	98	65.886	ENSSPAG00000021660	npm1a	92	60.678	Stegastes_partitus
ENSONIG00000001860	npm1a	98	72.425	ENSTRUG00000024003	npm1a	99	72.425	Takifugu_rubripes
ENSONIG00000001860	npm1a	98	69.900	ENSTNIG00000010773	npm1a	99	68.771	Tetraodon_nigroviridis
ENSONIG00000001860	npm1a	98	61.258	ENSXCOG00000005958	npm1a	99	63.763	Xiphophorus_couchianus
ENSONIG00000001860	npm1a	98	66.230	ENSXMAG00000000396	npm1a	99	65.563	Xiphophorus_maculatus