EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000001925 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 3669 bases
Position: chrGL831166.1:1223879-1227547
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000002413	RRM_1	PF00076.22	9.9e-32	1	2
ENSONIP00000002413	RRM_1	PF00076.22	9.9e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000002414	-	1074	-	ENSONIP00000002413	357 (aa)	-	I3J0M3

Gene Model

Click here to download ENSONIG00000001925's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000001925's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000001925	-	52	85.946	ENSONIG00000020247	-	52	86.339
ENSONIG00000001925	-	51	39.896	ENSONIG00000013974	srsf9	66	41.243
ENSONIG00000001925	-	50	65.000	ENSONIG00000005759	srsf5b	61	65.000
ENSONIG00000001925	-	64	37.917	ENSONIG00000004857	-	89	38.428
ENSONIG00000001925	-	51	63.243	ENSONIG00000019583	srsf5a	98	54.483

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000001925	-	51	69.907	ENSAPOG00000000810	srsf6a	92	64.815	Acanthochromis_polyacanthus
ENSONIG00000001925	-	54	58.298	ENSAMEG00000003710	SRSF6	53	71.739	Ailuropoda_melanoleuca
ENSONIG00000001925	-	71	75.197	ENSACIG00000020091	-	95	83.721	Amphilophus_citrinellus
ENSONIG00000001925	-	91	86.111	ENSACIG00000023658	-	90	83.601	Amphilophus_citrinellus
ENSONIG00000001925	-	51	66.210	ENSAOCG00000019410	-	90	63.470	Amphiprion_ocellaris
ENSONIG00000001925	-	52	86.486	ENSAOCG00000004309	-	56	86.885	Amphiprion_ocellaris
ENSONIG00000001925	-	54	84.375	ENSAPEG00000020746	-	64	83.060	Amphiprion_percula
ENSONIG00000001925	-	88	85.890	ENSAPEG00000013086	-	93	77.982	Amphiprion_percula
ENSONIG00000001925	-	52	84.783	ENSATEG00000007255	-	70	82.514	Anabas_testudineus
ENSONIG00000001925	-	60	84.507	ENSATEG00000010679	-	79	84.507	Anabas_testudineus
ENSONIG00000001925	-	61	59.361	ENSAPLG00000014472	SRSF6	88	69.424	Anas_platyrhynchos
ENSONIG00000001925	-	71	63.529	ENSACAG00000002061	SRSF6	86	72.549	Anolis_carolinensis
ENSONIG00000001925	-	88	74.922	ENSAMXG00000042692	-	96	81.481	Astyanax_mexicanus
ENSONIG00000001925	-	52	88.172	ENSCJAG00000048403	SRSF6	67	85.792	Callithrix_jacchus
ENSONIG00000001925	-	54	71.795	ENSCAFG00000009289	SRSF6	58	94.872	Canis_familiaris
ENSONIG00000001925	-	54	71.795	ENSCAFG00020013559	SRSF6	58	94.872	Canis_lupus_dingo
ENSONIG00000001925	-	52	77.005	ENSCCAG00000018540	-	60	74.457	Cebus_capucinus
ENSONIG00000001925	-	52	88.172	ENSCATG00000030794	SRSF6	58	93.590	Cercocebus_atys
ENSONIG00000001925	-	52	88.172	ENSCLAG00000010247	SRSF6	58	93.590	Chinchilla_lanigera
ENSONIG00000001925	-	52	88.172	ENSCSAG00000014022	SRSF6	53	85.792	Chlorocebus_sabaeus
ENSONIG00000001925	-	52	88.172	ENSCGRG00001022339	Srsf6	58	93.590	Cricetulus_griseus_chok1gshd
ENSONIG00000001925	-	52	89.305	ENSDARG00000016783	srsf6b	82	96.154	Danio_rerio
ENSONIG00000001925	-	52	88.172	ENSDNOG00000008410	SRSF6	52	85.792	Dasypus_novemcinctus
ENSONIG00000001925	-	54	71.795	ENSEASG00005023429	SRSF6	53	85.792	Equus_asinus_asinus
ENSONIG00000001925	-	52	88.172	ENSECAG00000023932	SRSF6	56	85.792	Equus_caballus
ENSONIG00000001925	-	85	73.927	ENSELUG00000013506	SRSF6	70	94.872	Esox_lucius
ENSONIG00000001925	-	52	87.634	ENSELUG00000024182	SRSF6	90	88.618	Esox_lucius
ENSONIG00000001925	-	54	71.795	ENSFCAG00000032814	SRSF6	53	85.792	Felis_catus
ENSONIG00000001925	-	88	83.962	ENSFHEG00000023065	srsf6a	93	81.703	Fundulus_heteroclitus
ENSONIG00000001925	-	51	86.339	ENSGMOG00000014458	srsf6a	88	67.692	Gadus_morhua
ENSONIG00000001925	-	51	74.586	ENSGMOG00000006105	srsf6a	62	72.376	Gadus_morhua
ENSONIG00000001925	-	71	63.424	ENSGALG00000000990	SRSF6	90	72.468	Gallus_gallus
ENSONIG00000001925	-	100	66.111	ENSGACG00000006084	srsf6a	52	93.443	Gasterosteus_aculeatus
ENSONIG00000001925	-	68	78.008	ENSHBUG00000006386	-	86	65.899	Haplochromis_burtoni
ENSONIG00000001925	-	52	88.172	ENSHGLG00000007348	SRSF6	58	93.590	Heterocephalus_glaber_female
ENSONIG00000001925	-	54	69.231	ENSHGLG00000007701	-	56	66.667	Heterocephalus_glaber_female
ENSONIG00000001925	-	86	72.964	ENSHCOG00000002740	srsf6a	94	71.975	Hippocampus_comes
ENSONIG00000001925	-	50	83.708	ENSIPUG00000016856	SRSF6	91	61.392	Ictalurus_punctatus
ENSONIG00000001925	-	88	77.460	ENSKMAG00000011934	srsf6a	92	75.159	Kryptolebias_marmoratus
ENSONIG00000001925	-	81	94.022	ENSLBEG00000007356	srsf6a	95	74.854	Labrus_bergylta
ENSONIG00000001925	-	85	77.199	ENSLACG00000005466	SRSF6	54	85.792	Latimeria_chalumnae
ENSONIG00000001925	-	52	88.172	ENSMFAG00000036925	SRSF6	58	93.590	Macaca_fascicularis
ENSONIG00000001925	-	52	88.172	ENSMMUG00000006742	SRSF6	58	93.590	Macaca_mulatta
ENSONIG00000001925	-	71	58.333	ENSMNEG00000038270	-	53	85.246	Macaca_nemestrina
ENSONIG00000001925	-	52	87.634	ENSMNEG00000027392	-	58	92.308	Macaca_nemestrina
ENSONIG00000001925	-	68	76.955	ENSMZEG00005008032	-	56	86.885	Maylandia_zebra
ENSONIG00000001925	-	100	71.429	ENSMZEG00005020658	-	95	73.163	Maylandia_zebra
ENSONIG00000001925	-	94	69.543	ENSMALG00000003702	srsf6a	99	69.543	Monopterus_albus
ENSONIG00000001925	-	66	72.766	MGP_CAROLIEiJ_G0024606	Srsf6	58	93.590	Mus_caroli
ENSONIG00000001925	-	66	72.766	ENSMUSG00000016921	Srsf6	58	93.590	Mus_musculus
ENSONIG00000001925	-	66	72.766	MGP_PahariEiJ_G0026050	Srsf6	58	93.590	Mus_pahari
ENSONIG00000001925	-	66	72.766	MGP_SPRETEiJ_G0025528	Srsf6	58	93.590	Mus_spretus
ENSONIG00000001925	-	52	88.172	ENSMPUG00000017692	SRSF6	63	85.792	Mustela_putorius_furo
ENSONIG00000001925	-	52	59.624	ENSMLUG00000016618	SRSF6	52	58.571	Myotis_lucifugus
ENSONIG00000001925	-	52	88.172	ENSNGAG00000017560	Srsf6	58	93.590	Nannospalax_galili
ENSONIG00000001925	-	52	85.946	ENSNBRG00000014709	-	57	86.885	Neolamprologus_brichardi
ENSONIG00000001925	-	52	87.097	ENSMEUG00000014615	SRSF6	60	86.339	Notamacropus_eugenii
ENSONIG00000001925	-	51	52.747	ENSOCUG00000023999	-	70	53.333	Oryctolagus_cuniculus
ENSONIG00000001925	-	52	69.744	ENSOCUG00000009785	-	62	69.474	Oryctolagus_cuniculus
ENSONIG00000001925	-	52	75.269	ENSOMEG00000006001	srsf6a	93	62.931	Oryzias_melastigma
ENSONIG00000001925	-	52	87.634	ENSOGAG00000014468	SRSF6	52	85.246	Otolemur_garnettii
ENSONIG00000001925	-	52	73.118	ENSPPAG00000043131	-	56	73.224	Pan_paniscus
ENSONIG00000001925	-	54	71.795	ENSPPRG00000008917	SRSF6	53	85.792	Panthera_pardus
ENSONIG00000001925	-	52	73.118	ENSPTRG00000046274	-	56	73.224	Pan_troglodytes
ENSONIG00000001925	-	52	88.172	ENSPANG00000035224	SRSF6	58	93.590	Papio_anubis
ENSONIG00000001925	-	50	73.370	ENSPKIG00000015703	-	95	60.927	Paramormyrops_kingsleyae
ENSONIG00000001925	-	97	72.622	ENSPKIG00000018463	-	84	87.978	Paramormyrops_kingsleyae
ENSONIG00000001925	-	88	81.013	ENSPMGG00000014963	srsf6a	54	95.082	Periophthalmus_magnuspinnatus
ENSONIG00000001925	-	88	78.078	ENSPLAG00000009243	srsf6a	80	93.701	Poecilia_latipinna
ENSONIG00000001925	-	88	83.901	ENSPMEG00000006042	SRSF6	93	82.298	Poecilia_mexicana
ENSONIG00000001925	-	52	73.684	ENSPMEG00000006056	SRSF6	89	57.991	Poecilia_mexicana
ENSONIG00000001925	-	52	86.559	ENSPCAG00000010954	SRSF6	55	84.153	Procavia_capensis
ENSONIG00000001925	-	100	94.038	ENSPNYG00000011272	-	100	94.038	Pundamilia_nyererei
ENSONIG00000001925	-	52	85.946	ENSPNYG00000004944	-	57	86.885	Pundamilia_nyererei
ENSONIG00000001925	-	66	72.766	ENSRNOG00000006380	Srsf6	53	85.792	Rattus_norvegicus
ENSONIG00000001925	-	82	76.289	ENSSFOG00015015169	SRSF6	59	90.710	Scleropages_formosus
ENSONIG00000001925	-	88	72.384	ENSSFOG00015019681	-	52	88.021	Scleropages_formosus
ENSONIG00000001925	-	68	75.820	ENSSMAG00000017447	-	55	83.607	Scophthalmus_maximus
ENSONIG00000001925	-	63	78.761	ENSSMAG00000014819	-	83	71.362	Scophthalmus_maximus
ENSONIG00000001925	-	88	77.538	ENSSLDG00000022841	srsf6a	97	76.923	Seriola_lalandi_dorsalis
ENSONIG00000001925	-	80	98.919	ENSSPAG00000002362	srsf6a	96	84.615	Stegastes_partitus
ENSONIG00000001925	-	52	88.172	ENSSSCG00000007362	SRSF6	60	85.792	Sus_scrofa
ENSONIG00000001925	-	71	63.529	ENSTGUG00000003455	SRSF6	90	71.975	Taeniopygia_guttata
ENSONIG00000001925	-	87	79.743	ENSTNIG00000001692	srsf6a	94	65.429	Tetraodon_nigroviridis
ENSONIG00000001925	-	54	71.795	ENSUAMG00000003559	SRSF6	58	94.872	Ursus_americanus
ENSONIG00000001925	-	88	80.997	ENSXMAG00000021849	srsf6a	93	80.000	Xiphophorus_maculatus