EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000001972 (Gene tree)
Gene ID: -
Gene Symbol: msi2a (1 of many)
Alias: -
Full Name: musashi RNA-binding protein 2a
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 162409 bases
Position: chrGL831223.1:2204593-2367001
Accession: ZDB-GENE-030826-25
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000002469	RRM_1	PF00076.22	5e-26	1	2
ENSONIP00000002469	RRM_1	PF00076.22	5e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000002470	-	816	-	ENSONIP00000002469	180 (aa)	-	I3J0S9

Gene Model

Click here to download ENSONIG00000001972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000001972's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000001972	msi2a	84	46.154	ENSONIG00000013237	-	57	48.529
ENSONIG00000001972	msi2a	84	76.316	ENSONIG00000019452	-	52	76.316
ENSONIG00000001972	msi2a	83	48.387	ENSONIG00000012982	hnrnpaba	51	50.000
ENSONIG00000001972	msi2a	82	47.651	ENSONIG00000015390	hnrnpd	53	48.611
ENSONIG00000001972	msi2a	57	30.769	ENSONIG00000001274	-	53	30.769
ENSONIG00000001972	msi2a	84	80.132	ENSONIG00000011182	MSI1	54	80.132
ENSONIG00000001972	msi2a	72	42.424	ENSONIG00000012248	hnrnpa1b	50	42.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000001972	msi2a	84	94.040	ENSG00000153944	MSI2	86	96.522	Homo_sapiens
ENSONIG00000001972	msi2a	84	100.000	ENSAPOG00000001658	msi2a	62	100.000	Acanthochromis_polyacanthus
ENSONIG00000001972	msi2a	72	96.154	ENSAMEG00000002697	MSI2	52	96.154	Ailuropoda_melanoleuca
ENSONIG00000001972	msi2a	92	76.506	ENSAOCG00000014822	msi2a	76	76.506	Amphiprion_ocellaris
ENSONIG00000001972	msi2a	84	100.000	ENSAPEG00000007706	msi2a	55	100.000	Amphiprion_percula
ENSONIG00000001972	msi2a	84	100.000	ENSATEG00000010498	msi2a	62	100.000	Anabas_testudineus
ENSONIG00000001972	msi2a	72	94.059	ENSATEG00000003301	-	50	94.059	Anabas_testudineus
ENSONIG00000001972	msi2a	84	94.040	ENSANAG00000037827	MSI2	67	96.154	Aotus_nancymaae
ENSONIG00000001972	msi2a	84	100.000	ENSACLG00000007752	msi2a	62	100.000	Astatotilapia_calliptera
ENSONIG00000001972	msi2a	84	96.026	ENSAMXG00000010474	msi2b	56	96.923	Astyanax_mexicanus
ENSONIG00000001972	msi2a	84	96.026	ENSAMXG00000032796	msi2a	58	96.026	Astyanax_mexicanus
ENSONIG00000001972	msi2a	84	91.391	ENSBTAG00000004406	MSI2	59	91.391	Bos_taurus
ENSONIG00000001972	msi2a	74	71.642	WBGene00003423	msi-1	68	71.642	Caenorhabditis_elegans
ENSONIG00000001972	msi2a	84	94.040	ENSCJAG00000013998	MSI2	67	96.154	Callithrix_jacchus
ENSONIG00000001972	msi2a	72	95.614	ENSCAFG00020025620	MSI2	54	92.742	Canis_lupus_dingo
ENSONIG00000001972	msi2a	84	91.391	ENSCHIG00000016580	MSI2	58	91.391	Capra_hircus
ENSONIG00000001972	msi2a	72	82.857	ENSCPOG00000034042	MSI2	51	82.857	Cavia_porcellus
ENSONIG00000001972	msi2a	84	94.040	ENSCCAG00000033927	MSI2	67	96.154	Cebus_capucinus
ENSONIG00000001972	msi2a	78	95.714	ENSCATG00000040879	MSI2	67	96.154	Cercocebus_atys
ENSONIG00000001972	msi2a	84	94.040	ENSCLAG00000014325	MSI2	87	87.500	Chinchilla_lanigera
ENSONIG00000001972	msi2a	84	94.040	ENSCSAG00000005633	MSI2	58	94.040	Chlorocebus_sabaeus
ENSONIG00000001972	msi2a	63	78.000	ENSCHOG00000008660	MSI2	55	78.000	Choloepus_hoffmanni
ENSONIG00000001972	msi2a	72	95.556	ENSCPBG00000009942	MSI2	58	95.556	Chrysemys_picta_bellii
ENSONIG00000001972	msi2a	74	68.310	ENSCSAVG00000010397	-	58	68.310	Ciona_savignyi
ENSONIG00000001972	msi2a	72	96.154	ENSCANG00000036414	MSI2	67	96.154	Colobus_angolensis_palliatus
ENSONIG00000001972	msi2a	84	93.377	ENSCGRG00001013330	Msi2	74	89.623	Cricetulus_griseus_chok1gshd
ENSONIG00000001972	msi2a	72	96.154	ENSCGRG00000003141	Msi2	51	96.154	Cricetulus_griseus_crigri
ENSONIG00000001972	msi2a	76	97.059	ENSCSEG00000013549	msi2a	77	97.059	Cynoglossus_semilaevis
ENSONIG00000001972	msi2a	76	90.441	ENSCSEG00000003266	-	57	90.441	Cynoglossus_semilaevis
ENSONIG00000001972	msi2a	84	100.000	ENSCVAG00000017075	msi2a	62	100.000	Cyprinodon_variegatus
ENSONIG00000001972	msi2a	84	97.351	ENSDARG00000032614	msi2b	100	97.030	Danio_rerio
ENSONIG00000001972	msi2a	72	95.495	ENSDNOG00000014501	MSI2	52	95.495	Dasypus_novemcinctus
ENSONIG00000001972	msi2a	63	96.460	ENSDORG00000028440	-	100	96.460	Dipodomys_ordii
ENSONIG00000001972	msi2a	72	82.979	FBgn0260943	Rbp6	59	82.979	Drosophila_melanogaster
ENSONIG00000001972	msi2a	84	94.040	ENSECAG00000011435	MSI2	60	94.040	Equus_caballus
ENSONIG00000001972	msi2a	58	59.551	ENSEEUG00000007810	MSI2	51	59.551	Erinaceus_europaeus
ENSONIG00000001972	msi2a	84	97.351	ENSELUG00000011747	msi2a	62	90.909	Esox_lucius
ENSONIG00000001972	msi2a	84	96.053	ENSELUG00000001361	msi2b	80	96.324	Esox_lucius
ENSONIG00000001972	msi2a	95	70.175	ENSFCAG00000033787	-	89	70.175	Felis_catus
ENSONIG00000001972	msi2a	84	94.040	ENSFCAG00000041686	MSI2	91	91.111	Felis_catus
ENSONIG00000001972	msi2a	72	96.154	ENSFDAG00000016118	MSI2	52	96.154	Fukomys_damarensis
ENSONIG00000001972	msi2a	84	100.000	ENSFHEG00000000084	msi2a	96	100.000	Fundulus_heteroclitus
ENSONIG00000001972	msi2a	81	97.115	ENSGMOG00000007596	-	100	97.115	Gadus_morhua
ENSONIG00000001972	msi2a	84	92.715	ENSGALG00000005567	MSI2	55	92.715	Gallus_gallus
ENSONIG00000001972	msi2a	85	99.346	ENSGAFG00000006974	msi2a	92	99.346	Gambusia_affinis
ENSONIG00000001972	msi2a	72	96.154	ENSGGOG00000013182	MSI2	67	96.154	Gorilla_gorilla
ENSONIG00000001972	msi2a	84	100.000	ENSHBUG00000020800	msi2a	73	99.265	Haplochromis_burtoni
ENSONIG00000001972	msi2a	84	73.510	ENSHGLG00000012444	MSI2	76	92.308	Heterocephalus_glaber_female
ENSONIG00000001972	msi2a	63	96.491	ENSHGLG00100004028	-	87	96.491	Heterocephalus_glaber_male
ENSONIG00000001972	msi2a	84	99.338	ENSHCOG00000000266	msi2a	54	99.338	Hippocampus_comes
ENSONIG00000001972	msi2a	84	96.026	ENSIPUG00000003732	msi2b	55	96.026	Ictalurus_punctatus
ENSONIG00000001972	msi2a	84	94.040	ENSIPUG00000021097	msi2a	62	94.040	Ictalurus_punctatus
ENSONIG00000001972	msi2a	72	82.857	ENSSTOG00000007884	MSI2	51	82.857	Ictidomys_tridecemlineatus
ENSONIG00000001972	msi2a	63	96.460	ENSJJAG00000009467	-	100	96.460	Jaculus_jaculus
ENSONIG00000001972	msi2a	84	99.338	ENSKMAG00000009494	msi2a	58	99.338	Kryptolebias_marmoratus
ENSONIG00000001972	msi2a	84	100.000	ENSLBEG00000007061	msi2a	88	100.000	Labrus_bergylta
ENSONIG00000001972	msi2a	73	92.941	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSONIG00000001972	msi2a	84	97.351	ENSLOCG00000004675	msi2b	100	86.992	Lepisosteus_oculatus
ENSONIG00000001972	msi2a	72	96.154	ENSMFAG00000003775	MSI2	67	96.154	Macaca_fascicularis
ENSONIG00000001972	msi2a	72	96.154	ENSMMUG00000002069	MSI2	67	96.154	Macaca_mulatta
ENSONIG00000001972	msi2a	84	94.040	ENSMNEG00000045275	MSI2	67	96.154	Macaca_nemestrina
ENSONIG00000001972	msi2a	72	96.154	ENSMLEG00000033888	MSI2	67	96.154	Mandrillus_leucophaeus
ENSONIG00000001972	msi2a	84	100.000	ENSMAMG00000010503	msi2a	92	91.333	Mastacembelus_armatus
ENSONIG00000001972	msi2a	84	94.079	ENSMAMG00000002488	-	99	94.079	Mastacembelus_armatus
ENSONIG00000001972	msi2a	84	100.000	ENSMZEG00005007676	msi2a	62	100.000	Maylandia_zebra
ENSONIG00000001972	msi2a	84	93.377	ENSMAUG00000003862	Msi2	55	93.377	Mesocricetus_auratus
ENSONIG00000001972	msi2a	84	94.040	ENSMICG00000013598	-	67	96.154	Microcebus_murinus
ENSONIG00000001972	msi2a	84	84.106	ENSMICG00000032913	-	62	84.106	Microcebus_murinus
ENSONIG00000001972	msi2a	84	93.377	ENSMOCG00000005820	Msi2	55	93.377	Microtus_ochrogaster
ENSONIG00000001972	msi2a	95	83.626	ENSMMOG00000008348	msi2a	100	83.626	Mola_mola
ENSONIG00000001972	msi2a	88	96.203	ENSMALG00000000071	msi2a	80	99.265	Monopterus_albus
ENSONIG00000001972	msi2a	84	93.377	MGP_CAROLIEiJ_G0016948	Msi2	100	96.460	Mus_caroli
ENSONIG00000001972	msi2a	84	93.377	ENSMUSG00000069769	Msi2	100	96.460	Mus_musculus
ENSONIG00000001972	msi2a	84	93.377	MGP_PahariEiJ_G0018079	Msi2	100	96.460	Mus_pahari
ENSONIG00000001972	msi2a	84	93.377	MGP_SPRETEiJ_G0017795	Msi2	100	96.460	Mus_spretus
ENSONIG00000001972	msi2a	72	96.154	ENSMPUG00000015377	MSI2	52	96.154	Mustela_putorius_furo
ENSONIG00000001972	msi2a	72	95.385	ENSMLUG00000007865	MSI2	52	95.385	Myotis_lucifugus
ENSONIG00000001972	msi2a	84	93.377	ENSNGAG00000017807	Msi2	55	93.377	Nannospalax_galili
ENSONIG00000001972	msi2a	84	100.000	ENSNBRG00000014596	msi2a	95	96.835	Neolamprologus_brichardi
ENSONIG00000001972	msi2a	72	95.833	ENSNLEG00000008059	MSI2	70	95.690	Nomascus_leucogenys
ENSONIG00000001972	msi2a	84	94.040	ENSODEG00000011974	MSI2	55	94.040	Octodon_degus
ENSONIG00000001972	msi2a	72	96.154	ENSOCUG00000010440	MSI2	52	96.154	Oryctolagus_cuniculus
ENSONIG00000001972	msi2a	84	100.000	ENSORLG00000009671	msi2a	62	100.000	Oryzias_latipes
ENSONIG00000001972	msi2a	84	100.000	ENSORLG00020021556	msi2a	62	100.000	Oryzias_latipes_hni
ENSONIG00000001972	msi2a	84	100.000	ENSORLG00015004592	msi2a	62	100.000	Oryzias_latipes_hsok
ENSONIG00000001972	msi2a	84	100.000	ENSOMEG00000000146	msi2a	62	100.000	Oryzias_melastigma
ENSONIG00000001972	msi2a	68	91.803	ENSOGAG00000005621	MSI2	55	91.057	Otolemur_garnettii
ENSONIG00000001972	msi2a	72	96.154	ENSPPAG00000037697	MSI2	67	96.154	Pan_paniscus
ENSONIG00000001972	msi2a	72	96.154	ENSPPRG00000001848	MSI2	67	96.154	Panthera_pardus
ENSONIG00000001972	msi2a	80	71.528	ENSPTIG00000021873	-	77	71.528	Panthera_tigris_altaica
ENSONIG00000001972	msi2a	72	95.690	ENSPTIG00000021678	MSI2	62	95.690	Panthera_tigris_altaica
ENSONIG00000001972	msi2a	72	96.154	ENSPTRG00000009437	MSI2	67	96.154	Pan_troglodytes
ENSONIG00000001972	msi2a	84	94.040	ENSPANG00000022319	MSI2	67	96.154	Papio_anubis
ENSONIG00000001972	msi2a	84	93.377	ENSPKIG00000007038	-	70	93.377	Paramormyrops_kingsleyae
ENSONIG00000001972	msi2a	51	95.604	ENSPKIG00000017107	-	81	95.604	Paramormyrops_kingsleyae
ENSONIG00000001972	msi2a	84	90.066	ENSPMGG00000005888	msi2a	56	90.066	Periophthalmus_magnuspinnatus
ENSONIG00000001972	msi2a	63	96.460	ENSPEMG00000021793	-	100	96.460	Peromyscus_maniculatus_bairdii
ENSONIG00000001972	msi2a	84	96.026	ENSPCIG00000006063	MSI2	54	96.026	Phascolarctos_cinereus
ENSONIG00000001972	msi2a	58	99.048	ENSPFOG00000019337	MSI2	91	99.048	Poecilia_formosa
ENSONIG00000001972	msi2a	76	100.000	ENSPLAG00000000436	msi2a	72	100.000	Poecilia_latipinna
ENSONIG00000001972	msi2a	76	88.971	ENSPMEG00000013247	msi2a	75	88.971	Poecilia_mexicana
ENSONIG00000001972	msi2a	84	100.000	ENSPREG00000000881	msi2a	55	90.066	Poecilia_reticulata
ENSONIG00000001972	msi2a	72	96.154	ENSPCOG00000019195	-	93	96.154	Propithecus_coquereli
ENSONIG00000001972	msi2a	72	95.690	ENSPVAG00000017053	MSI2	53	95.690	Pteropus_vampyrus
ENSONIG00000001972	msi2a	84	100.000	ENSPNYG00000018393	msi2a	62	100.000	Pundamilia_nyererei
ENSONIG00000001972	msi2a	84	95.364	ENSPNAG00000014957	msi2a	58	95.364	Pygocentrus_nattereri
ENSONIG00000001972	msi2a	84	96.026	ENSPNAG00000000844	msi2b	56	86.093	Pygocentrus_nattereri
ENSONIG00000001972	msi2a	72	95.050	ENSRNOG00000025338	Msi2	50	95.050	Rattus_norvegicus
ENSONIG00000001972	msi2a	51	73.626	ENSRBIG00000032064	-	82	73.626	Rhinopithecus_bieti
ENSONIG00000001972	msi2a	72	96.491	ENSRROG00000034421	-	92	96.491	Rhinopithecus_roxellana
ENSONIG00000001972	msi2a	72	97.872	ENSSBOG00000026425	MSI2	67	96.154	Saimiri_boliviensis_boliviensis
ENSONIG00000001972	msi2a	72	96.899	ENSSHAG00000008672	MSI2	86	65.714	Sarcophilus_harrisii
ENSONIG00000001972	msi2a	72	93.077	ENSSFOG00015021687	-	61	93.077	Scleropages_formosus
ENSONIG00000001972	msi2a	84	100.000	ENSSMAG00000018484	msi2a	62	100.000	Scophthalmus_maximus
ENSONIG00000001972	msi2a	84	100.000	ENSSDUG00000014507	msi2a	82	100.000	Seriola_dumerili
ENSONIG00000001972	msi2a	84	94.040	ENSSDUG00000021968	-	99	94.040	Seriola_dumerili
ENSONIG00000001972	msi2a	51	79.121	ENSSLDG00000021332	-	68	79.121	Seriola_lalandi_dorsalis
ENSONIG00000001972	msi2a	84	100.000	ENSSLDG00000017172	msi2a	62	100.000	Seriola_lalandi_dorsalis
ENSONIG00000001972	msi2a	89	90.625	ENSSPUG00000000913	-	95	90.625	Sphenodon_punctatus
ENSONIG00000001972	msi2a	84	100.000	ENSSPAG00000017793	msi2a	62	100.000	Stegastes_partitus
ENSONIG00000001972	msi2a	84	94.040	ENSSSCG00000038505	MSI2	62	94.040	Sus_scrofa
ENSONIG00000001972	msi2a	84	100.000	ENSTRUG00000021248	msi2a	59	88.608	Takifugu_rubripes
ENSONIG00000001972	msi2a	75	77.778	ENSTBEG00000001241	MSI2	57	77.778	Tupaia_belangeri
ENSONIG00000001972	msi2a	72	96.154	ENSUAMG00000000700	MSI2	67	96.154	Ursus_americanus
ENSONIG00000001972	msi2a	72	95.050	ENSUMAG00000000505	MSI2	54	95.050	Ursus_maritimus
ENSONIG00000001972	msi2a	84	95.614	ENSVVUG00000011783	MSI2	82	92.742	Vulpes_vulpes
ENSONIG00000001972	msi2a	84	100.000	ENSXMAG00000000608	msi2a	62	100.000	Xiphophorus_maculatus