EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000001991 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-100f3.2
Alias: -
Full Name: si:ch1073-100f3.2
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 13302 bases
Position: chrGL831149.1:6271942-6285243
Accession: ZDB-GENE-131127-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000002493	Ribosomal_L12	PF00542.19	2.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000002493	-	2856	-	ENSONIP00000002492	271 (aa)	-	I3J0V2
ENSONIT00000002494	-	1347	-	ENSONIP00000002493	448 (aa)	-	I3J0V3

Gene Model

Click here to download ENSONIG00000001991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000001991's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000001991	si:ch1073-100f3.2	99	64.889	ENSAMEG00000017519	-	99	64.444	Ailuropoda_melanoleuca
ENSONIG00000001991	si:ch1073-100f3.2	98	65.760	ENSCAFG00000005812	-	98	65.533	Canis_familiaris
ENSONIG00000001991	si:ch1073-100f3.2	98	66.667	ENSCAFG00020009743	-	98	66.440	Canis_lupus_dingo
ENSONIG00000001991	si:ch1073-100f3.2	99	65.695	ENSFCAG00000012935	-	99	65.695	Felis_catus
ENSONIG00000001991	si:ch1073-100f3.2	74	67.976	ENSFALG00000012075	-	92	67.812	Ficedula_albicollis
ENSONIG00000001991	si:ch1073-100f3.2	93	73.621	ENSLACG00000015479	si:ch1073-100f3.2	94	73.621	Latimeria_chalumnae
ENSONIG00000001991	si:ch1073-100f3.2	92	69.231	ENSMMUG00000004457	SLC25A10	97	66.972	Macaca_mulatta
ENSONIG00000001991	si:ch1073-100f3.2	93	65.485	ENSSHAG00000012052	-	95	66.194	Sarcophilus_harrisii
ENSONIG00000001991	si:ch1073-100f3.2	91	70.944	ENSXETG00000019705	slc25a10	99	70.388	Xenopus_tropicalis