EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000002290 (Gene tree)
Gene ID: -
Gene Symbol: pum1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 23399 bases
Position: chrGL831161.1:1170338-1193736
Accession: 100697243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000002860	PUF	PF00806.19	2.3e-69	1	8
ENSONIP00000002860	PUF	PF00806.19	2.3e-69	2	8
ENSONIP00000002860	PUF	PF00806.19	2.3e-69	3	8
ENSONIP00000002860	PUF	PF00806.19	2.3e-69	4	8
ENSONIP00000002860	PUF	PF00806.19	2.3e-69	5	8
ENSONIP00000002860	PUF	PF00806.19	2.3e-69	6	8
ENSONIP00000002860	PUF	PF00806.19	2.3e-69	7	8
ENSONIP00000002860	PUF	PF00806.19	2.3e-69	8	8
ENSONIP00000002861	PUF	PF00806.19	2.9e-69	1	8
ENSONIP00000002861	PUF	PF00806.19	2.9e-69	2	8
ENSONIP00000002861	PUF	PF00806.19	2.9e-69	3	8
ENSONIP00000002861	PUF	PF00806.19	2.9e-69	4	8
ENSONIP00000002861	PUF	PF00806.19	2.9e-69	5	8
ENSONIP00000002861	PUF	PF00806.19	2.9e-69	6	8
ENSONIP00000002861	PUF	PF00806.19	2.9e-69	7	8
ENSONIP00000002861	PUF	PF00806.19	2.9e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000002862	-	3582	-	ENSONIP00000002861	1193 (aa)	-	I3J1X1
ENSONIT00000002861	-	7009	-	ENSONIP00000002860	1163 (aa)	XP_025758071	I3J1X0

Gene Model

Click here to download ENSONIG00000002290's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000002290's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000002290	pum1	94	90.843	ENSG00000134644	PUM1	99	91.106	Homo_sapiens
ENSONIG00000002290	pum1	100	99.656	ENSAPOG00000021632	pum1	100	99.656	Acanthochromis_polyacanthus
ENSONIG00000002290	pum1	100	76.568	ENSAMEG00000017656	PUM1	97	74.878	Ailuropoda_melanoleuca
ENSONIG00000002290	pum1	100	98.882	ENSACIG00000021013	pum1	100	98.882	Amphilophus_citrinellus
ENSONIG00000002290	pum1	100	99.656	ENSAOCG00000003944	pum1	100	99.656	Amphiprion_ocellaris
ENSONIG00000002290	pum1	100	99.656	ENSAPEG00000014550	pum1	100	99.656	Amphiprion_percula
ENSONIG00000002290	pum1	100	99.054	ENSATEG00000016004	pum1	100	99.277	Anabas_testudineus
ENSONIG00000002290	pum1	100	77.126	ENSAPLG00000009351	PUM1	100	75.266	Anas_platyrhynchos
ENSONIG00000002290	pum1	100	76.573	ENSACAG00000000682	PUM1	98	76.514	Anolis_carolinensis
ENSONIG00000002290	pum1	93	90.602	ENSANAG00000027865	PUM1	100	91.084	Aotus_nancymaae
ENSONIG00000002290	pum1	92	99.155	ENSACLG00000019354	pum1	100	99.155	Astatotilapia_calliptera
ENSONIG00000002290	pum1	100	82.288	ENSAMXG00000020607	pum1	96	82.288	Astyanax_mexicanus
ENSONIG00000002290	pum1	93	91.325	ENSBTAG00000018979	PUM1	100	81.763	Bos_taurus
ENSONIG00000002290	pum1	100	76.796	ENSCJAG00000006035	PUM1	100	81.618	Callithrix_jacchus
ENSONIG00000002290	pum1	85	90.843	ENSCAFG00020024616	PUM1	98	91.106	Canis_lupus_dingo
ENSONIG00000002290	pum1	93	90.843	ENSCHIG00000012952	PUM1	100	76.605	Capra_hircus
ENSONIG00000002290	pum1	100	76.548	ENSTSYG00000008868	PUM1	100	82.169	Carlito_syrichta
ENSONIG00000002290	pum1	100	76.383	ENSCPOG00000031613	PUM1	100	81.373	Cavia_porcellus
ENSONIG00000002290	pum1	94	91.325	ENSCATG00000017991	PUM1	93	91.807	Cercocebus_atys
ENSONIG00000002290	pum1	93	90.602	ENSCLAG00000007662	PUM1	100	81.373	Chinchilla_lanigera
ENSONIG00000002290	pum1	100	75.614	ENSCSAG00000001028	PUM1	100	73.945	Chlorocebus_sabaeus
ENSONIG00000002290	pum1	93	67.358	ENSCHOG00000010245	PUM1	93	65.700	Choloepus_hoffmanni
ENSONIG00000002290	pum1	93	91.566	ENSCPBG00000009288	PUM1	100	81.863	Chrysemys_picta_bellii
ENSONIG00000002290	pum1	94	90.843	ENSCANG00000042606	PUM1	100	91.325	Colobus_angolensis_palliatus
ENSONIG00000002290	pum1	100	75.765	ENSCGRG00001024949	Pum1	100	83.231	Cricetulus_griseus_chok1gshd
ENSONIG00000002290	pum1	100	75.765	ENSCGRG00000014197	Pum1	100	83.231	Cricetulus_griseus_crigri
ENSONIG00000002290	pum1	92	96.626	ENSCSEG00000015981	pum1	100	96.626	Cynoglossus_semilaevis
ENSONIG00000002290	pum1	100	97.936	ENSCVAG00000007043	pum1	100	97.936	Cyprinodon_variegatus
ENSONIG00000002290	pum1	100	84.081	ENSDARG00000099256	pum1	100	81.525	Danio_rerio
ENSONIG00000002290	pum1	100	76.961	ENSDNOG00000010939	PUM1	100	75.020	Dasypus_novemcinctus
ENSONIG00000002290	pum1	90	73.391	ENSETEG00000004355	PUM1	87	71.729	Echinops_telfairi
ENSONIG00000002290	pum1	100	76.694	ENSEASG00005010813	PUM1	100	74.918	Equus_asinus_asinus
ENSONIG00000002290	pum1	100	76.548	ENSECAG00000021369	PUM1	100	74.775	Equus_caballus
ENSONIG00000002290	pum1	76	90.444	ENSEEUG00000003871	PUM1	75	90.066	Erinaceus_europaeus
ENSONIG00000002290	pum1	100	89.420	ENSELUG00000002409	pum1	100	92.373	Esox_lucius
ENSONIG00000002290	pum1	93	91.325	ENSFCAG00000010374	PUM1	100	91.587	Felis_catus
ENSONIG00000002290	pum1	100	76.809	ENSFALG00000001214	PUM1	97	75.429	Ficedula_albicollis
ENSONIG00000002290	pum1	100	76.301	ENSFDAG00000011319	PUM1	100	81.250	Fukomys_damarensis
ENSONIG00000002290	pum1	96	90.342	ENSGALG00000042598	PUM1	100	89.600	Gallus_gallus
ENSONIG00000002290	pum1	100	98.194	ENSGAFG00000015617	pum1	100	98.194	Gambusia_affinis
ENSONIG00000002290	pum1	99	96.983	ENSGACG00000005717	pum1	100	96.983	Gasterosteus_aculeatus
ENSONIG00000002290	pum1	96	90.543	ENSGAGG00000001290	PUM1	100	89.800	Gopherus_agassizii
ENSONIG00000002290	pum1	94	90.843	ENSGGOG00000011983	PUM1	100	91.325	Gorilla_gorilla
ENSONIG00000002290	pum1	100	99.312	ENSHBUG00000018718	pum1	100	99.312	Haplochromis_burtoni
ENSONIG00000002290	pum1	100	76.301	ENSHGLG00000013819	Pum1	100	81.250	Heterocephalus_glaber_female
ENSONIG00000002290	pum1	100	76.301	ENSHGLG00100008621	Pum1	100	81.250	Heterocephalus_glaber_male
ENSONIG00000002290	pum1	92	90.525	ENSHCOG00000005149	pum1	100	89.212	Hippocampus_comes
ENSONIG00000002290	pum1	100	81.129	ENSIPUG00000020421	pum1	100	81.129	Ictalurus_punctatus
ENSONIG00000002290	pum1	100	76.694	ENSSTOG00000010757	PUM1	100	81.618	Ictidomys_tridecemlineatus
ENSONIG00000002290	pum1	100	76.694	ENSJJAG00000000530	Pum1	100	81.740	Jaculus_jaculus
ENSONIG00000002290	pum1	100	98.452	ENSKMAG00000003481	pum1	100	98.452	Kryptolebias_marmoratus
ENSONIG00000002290	pum1	100	97.764	ENSLBEG00000002527	pum1	100	97.764	Labrus_bergylta
ENSONIG00000002290	pum1	100	75.431	ENSLACG00000017188	PUM1	100	72.831	Latimeria_chalumnae
ENSONIG00000002290	pum1	100	82.000	ENSLOCG00000005210	pum1	100	81.086	Lepisosteus_oculatus
ENSONIG00000002290	pum1	100	76.763	ENSLAFG00000003178	PUM1	100	75.082	Loxodonta_africana
ENSONIG00000002290	pum1	94	91.325	ENSMFAG00000010291	PUM1	100	91.807	Macaca_fascicularis
ENSONIG00000002290	pum1	94	90.843	ENSMMUG00000013520	PUM1	100	91.325	Macaca_mulatta
ENSONIG00000002290	pum1	94	90.843	ENSMNEG00000034639	PUM1	100	91.325	Macaca_nemestrina
ENSONIG00000002290	pum1	94	90.843	ENSMLEG00000038743	PUM1	100	91.325	Mandrillus_leucophaeus
ENSONIG00000002290	pum1	100	98.624	ENSMAMG00000011606	pum1	100	98.624	Mastacembelus_armatus
ENSONIG00000002290	pum1	100	99.312	ENSMZEG00005005834	pum1	100	99.312	Maylandia_zebra
ENSONIG00000002290	pum1	100	77.355	ENSMGAG00000000724	PUM1	100	77.035	Meleagris_gallopavo
ENSONIG00000002290	pum1	100	76.510	ENSMAUG00000022090	Pum1	100	83.578	Mesocricetus_auratus
ENSONIG00000002290	pum1	94	90.602	ENSMICG00000007713	-	100	91.084	Microcebus_murinus
ENSONIG00000002290	pum1	94	89.904	ENSMICG00000012213	-	100	88.434	Microcebus_murinus
ENSONIG00000002290	pum1	100	75.950	ENSMOCG00000015463	Pum1	100	83.354	Microtus_ochrogaster
ENSONIG00000002290	pum1	85	98.554	ENSMMOG00000019817	pum1	100	98.317	Mola_mola
ENSONIG00000002290	pum1	100	76.636	ENSMODG00000017067	PUM1	100	74.693	Monodelphis_domestica
ENSONIG00000002290	pum1	85	99.277	ENSMALG00000016399	pum1	100	99.038	Monopterus_albus
ENSONIG00000002290	pum1	100	75.620	MGP_CAROLIEiJ_G0026549	Pum1	100	81.250	Mus_caroli
ENSONIG00000002290	pum1	100	75.620	ENSMUSG00000028580	Pum1	100	81.127	Mus_musculus
ENSONIG00000002290	pum1	100	75.537	MGP_PahariEiJ_G0028881	Pum1	100	81.127	Mus_pahari
ENSONIG00000002290	pum1	100	76.116	MGP_SPRETEiJ_G0027529	Pum1	100	81.127	Mus_spretus
ENSONIG00000002290	pum1	100	76.777	ENSMPUG00000015454	PUM1	100	74.918	Mustela_putorius_furo
ENSONIG00000002290	pum1	100	76.548	ENSMLUG00000006490	PUM1	100	74.693	Myotis_lucifugus
ENSONIG00000002290	pum1	100	76.612	ENSNGAG00000002378	Pum1	100	81.618	Nannospalax_galili
ENSONIG00000002290	pum1	79	99.375	ENSNBRG00000010689	pum1	100	99.375	Neolamprologus_brichardi
ENSONIG00000002290	pum1	94	87.711	ENSNLEG00000001151	PUM1	100	88.193	Nomascus_leucogenys
ENSONIG00000002290	pum1	73	78.793	ENSMEUG00000000976	-	67	80.608	Notamacropus_eugenii
ENSONIG00000002290	pum1	81	91.589	ENSOPRG00000001776	PUM1	75	91.589	Ochotona_princeps
ENSONIG00000002290	pum1	100	76.446	ENSODEG00000003465	PUM1	100	81.373	Octodon_degus
ENSONIG00000002290	pum1	85	63.939	ENSOANG00000004902	-	100	61.640	Ornithorhynchus_anatinus
ENSONIG00000002290	pum1	99	76.592	ENSOCUG00000008641	PUM1	99	74.815	Oryctolagus_cuniculus
ENSONIG00000002290	pum1	100	98.029	ENSORLG00000011482	pum1	100	98.029	Oryzias_latipes
ENSONIG00000002290	pum1	100	98.029	ENSORLG00020019461	pum1	100	98.029	Oryzias_latipes_hni
ENSONIG00000002290	pum1	100	98.029	ENSORLG00015011375	pum1	100	98.029	Oryzias_latipes_hsok
ENSONIG00000002290	pum1	87	98.795	ENSOMEG00000009312	pum1	100	98.795	Oryzias_melastigma
ENSONIG00000002290	pum1	100	74.068	ENSOGAG00000011063	PUM1	100	72.200	Otolemur_garnettii
ENSONIG00000002290	pum1	93	90.843	ENSOARG00000001899	PUM1	100	74.283	Ovis_aries
ENSONIG00000002290	pum1	94	90.843	ENSPPAG00000044003	PUM1	100	91.325	Pan_paniscus
ENSONIG00000002290	pum1	100	76.777	ENSPPRG00000001370	PUM1	100	81.740	Panthera_pardus
ENSONIG00000002290	pum1	100	76.612	ENSPTIG00000010798	PUM1	100	81.985	Panthera_tigris_altaica
ENSONIG00000002290	pum1	94	90.843	ENSPTRG00000000453	PUM1	100	91.325	Pan_troglodytes
ENSONIG00000002290	pum1	94	91.325	ENSPANG00000016338	PUM1	100	91.807	Papio_anubis
ENSONIG00000002290	pum1	95	92.289	ENSPKIG00000010578	pum1	100	76.769	Paramormyrops_kingsleyae
ENSONIG00000002290	pum1	100	77.344	ENSPSIG00000014118	PUM1	100	75.410	Pelodiscus_sinensis
ENSONIG00000002290	pum1	79	99.153	ENSPMGG00000005836	pum1	100	99.153	Periophthalmus_magnuspinnatus
ENSONIG00000002290	pum1	100	76.510	ENSPEMG00000010009	Pum1	100	83.578	Peromyscus_maniculatus_bairdii
ENSONIG00000002290	pum1	94	91.566	ENSPCIG00000014151	PUM1	100	91.106	Phascolarctos_cinereus
ENSONIG00000002290	pum1	95	97.484	ENSPFOG00000007289	pum1	99	97.994	Poecilia_formosa
ENSONIG00000002290	pum1	100	95.151	ENSPLAG00000007256	pum1	100	97.989	Poecilia_latipinna
ENSONIG00000002290	pum1	92	97.479	ENSPMEG00000019543	pum1	99	97.479	Poecilia_mexicana
ENSONIG00000002290	pum1	100	98.108	ENSPREG00000005195	pum1	100	98.305	Poecilia_reticulata
ENSONIG00000002290	pum1	100	75.203	ENSPPYG00000001621	PUM1	100	73.553	Pongo_abelii
ENSONIG00000002290	pum1	76	93.210	ENSPCAG00000001979	PUM1	74	93.210	Procavia_capensis
ENSONIG00000002290	pum1	94	90.602	ENSPCOG00000004398	PUM1	100	91.084	Propithecus_coquereli
ENSONIG00000002290	pum1	100	74.855	ENSPVAG00000005207	PUM1	97	73.159	Pteropus_vampyrus
ENSONIG00000002290	pum1	100	99.398	ENSPNYG00000009518	pum1	100	99.398	Pundamilia_nyererei
ENSONIG00000002290	pum1	100	82.797	ENSPNAG00000026728	pum1	100	82.726	Pygocentrus_nattereri
ENSONIG00000002290	pum1	100	75.702	ENSRNOG00000011709	Pum1	100	74.590	Rattus_norvegicus
ENSONIG00000002290	pum1	94	91.325	ENSRBIG00000042521	PUM1	100	91.807	Rhinopithecus_bieti
ENSONIG00000002290	pum1	94	90.843	ENSRROG00000020156	PUM1	100	91.325	Rhinopithecus_roxellana
ENSONIG00000002290	pum1	94	90.843	ENSSBOG00000032037	PUM1	100	91.325	Saimiri_boliviensis_boliviensis
ENSONIG00000002290	pum1	100	76.719	ENSSHAG00000010918	PUM1	100	74.775	Sarcophilus_harrisii
ENSONIG00000002290	pum1	100	97.420	ENSSMAG00000010918	pum1	100	99.277	Scophthalmus_maximus
ENSONIG00000002290	pum1	100	99.226	ENSSDUG00000009021	pum1	100	99.226	Seriola_dumerili
ENSONIG00000002290	pum1	94	99.153	ENSSLDG00000009667	pum1	100	99.153	Seriola_lalandi_dorsalis
ENSONIG00000002290	pum1	94	80.111	ENSSARG00000003055	PUM1	89	79.815	Sorex_araneus
ENSONIG00000002290	pum1	100	77.107	ENSSPUG00000006267	PUM1	100	75.246	Sphenodon_punctatus
ENSONIG00000002290	pum1	100	99.742	ENSSPAG00000016636	pum1	100	99.742	Stegastes_partitus
ENSONIG00000002290	pum1	100	89.135	ENSSSCG00000003591	PUM1	95	89.537	Sus_scrofa
ENSONIG00000002290	pum1	100	97.764	ENSTRUG00000013121	pum1	100	98.500	Takifugu_rubripes
ENSONIG00000002290	pum1	100	96.752	ENSTNIG00000016983	pum1	99	96.752	Tetraodon_nigroviridis
ENSONIG00000002290	pum1	87	90.244	ENSTBEG00000013810	PUM1	89	90.244	Tupaia_belangeri
ENSONIG00000002290	pum1	93	79.436	ENSTTRG00000007436	PUM1	88	77.195	Tursiops_truncatus
ENSONIG00000002290	pum1	99	74.864	ENSUAMG00000018262	-	100	73.029	Ursus_americanus
ENSONIG00000002290	pum1	93	91.325	ENSUMAG00000009211	PUM1	100	91.587	Ursus_maritimus
ENSONIG00000002290	pum1	92	83.951	ENSVPAG00000005902	PUM1	92	82.108	Vicugna_pacos
ENSONIG00000002290	pum1	93	91.325	ENSVVUG00000014631	PUM1	100	91.587	Vulpes_vulpes
ENSONIG00000002290	pum1	100	73.328	ENSXETG00000012904	pum1	100	71.289	Xenopus_tropicalis
ENSONIG00000002290	pum1	100	98.022	ENSXMAG00000002945	pum1	100	98.095	Xiphophorus_maculatus