EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000002318 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: -
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 6705 bases
Position: chrGL831140.1:3818228-3824932
Accession: ZDB-GENE-030131-698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000002895	RRM_5	PF13893.6	3.8e-06	1	1
ENSONIP00000002895	RRM_1	PF00076.22	6e-14	1	1
ENSONIP00000002895	SAP	PF02037.27	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000002896	-	2499	-	ENSONIP00000002895	832 (aa)	-	I3J205

Gene Model

Click here to download ENSONIG00000002318's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000002318's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000002318	safb	84	36.118	ENSONIG00000005838	sltm	73	37.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000002318	safb	66	43.528	ENSG00000160633	SAFB	78	61.475	Homo_sapiens
ENSONIG00000002318	safb	100	82.718	ENSAPOG00000022508	safb	100	82.956	Acanthochromis_polyacanthus
ENSONIG00000002318	safb	67	42.857	ENSAMEG00000012254	SAFB	96	41.112	Ailuropoda_melanoleuca
ENSONIG00000002318	safb	98	83.577	ENSACIG00000006247	safb	100	81.548	Amphilophus_citrinellus
ENSONIG00000002318	safb	95	81.920	ENSAOCG00000006308	safb	99	82.219	Amphiprion_ocellaris
ENSONIG00000002318	safb	100	82.262	ENSAPEG00000023342	safb	100	82.619	Amphiprion_percula
ENSONIG00000002318	safb	100	84.104	ENSATEG00000004998	safb	100	83.749	Anabas_testudineus
ENSONIG00000002318	safb	60	46.237	ENSAPLG00000006355	-	96	50.305	Anas_platyrhynchos
ENSONIG00000002318	safb	60	42.504	ENSAPLG00000005780	-	98	45.475	Anas_platyrhynchos
ENSONIG00000002318	safb	66	45.050	ENSANAG00000028821	SAFB	95	43.032	Aotus_nancymaae
ENSONIG00000002318	safb	100	92.446	ENSACLG00000001926	safb	100	92.446	Astatotilapia_calliptera
ENSONIG00000002318	safb	98	62.194	ENSAMXG00000018154	safb	100	62.514	Astyanax_mexicanus
ENSONIG00000002318	safb	95	43.946	ENSBTAG00000007875	SAFB	94	41.482	Bos_taurus
ENSONIG00000002318	safb	67	43.178	ENSCAFG00000018803	SAFB	83	41.676	Canis_familiaris
ENSONIG00000002318	safb	67	42.857	ENSCAFG00020018943	SAFB	95	41.676	Canis_lupus_dingo
ENSONIG00000002318	safb	95	43.870	ENSCHIG00000007262	SAFB	94	41.574	Capra_hircus
ENSONIG00000002318	safb	57	43.212	ENSTSYG00000001851	-	84	43.011	Carlito_syrichta
ENSONIG00000002318	safb	66	45.199	ENSCCAG00000020193	SAFB	95	43.128	Cebus_capucinus
ENSONIG00000002318	safb	66	43.730	ENSCATG00000029994	SAFB	95	42.560	Cercocebus_atys
ENSONIG00000002318	safb	64	42.190	ENSCLAG00000007734	SAFB	94	43.319	Chinchilla_lanigera
ENSONIG00000002318	safb	66	43.730	ENSCSAG00000009949	SAFB	95	42.560	Chlorocebus_sabaeus
ENSONIG00000002318	safb	60	32.632	ENSCHOG00000003208	SAFB	88	36.490	Choloepus_hoffmanni
ENSONIG00000002318	safb	92	47.475	ENSCPBG00000010936	-	98	47.410	Chrysemys_picta_bellii
ENSONIG00000002318	safb	92	44.056	ENSCPBG00000010928	-	98	44.301	Chrysemys_picta_bellii
ENSONIG00000002318	safb	64	43.760	ENSCANG00000004774	-	65	61.644	Colobus_angolensis_palliatus
ENSONIG00000002318	safb	98	42.938	ENSCANG00000019754	-	93	42.614	Colobus_angolensis_palliatus
ENSONIG00000002318	safb	65	41.827	ENSCGRG00001002254	Safb	95	40.745	Cricetulus_griseus_chok1gshd
ENSONIG00000002318	safb	55	38.419	ENSCGRG00000011529	Safb	89	38.498	Cricetulus_griseus_crigri
ENSONIG00000002318	safb	65	66.359	ENSCSEG00000019870	safb	100	67.029	Cynoglossus_semilaevis
ENSONIG00000002318	safb	100	64.516	ENSCVAG00000002226	safb	100	64.755	Cyprinodon_variegatus
ENSONIG00000002318	safb	96	61.456	ENSDARG00000020467	safb	98	61.272	Danio_rerio
ENSONIG00000002318	safb	66	43.981	ENSDNOG00000015746	SAFB	95	41.414	Dasypus_novemcinctus
ENSONIG00000002318	safb	64	42.488	ENSDORG00000016200	Safb	89	39.907	Dipodomys_ordii
ENSONIG00000002318	safb	64	42.881	ENSEASG00005023019	SAFB	95	42.358	Equus_asinus_asinus
ENSONIG00000002318	safb	64	43.193	ENSECAG00000018659	SAFB	85	41.731	Equus_caballus
ENSONIG00000002318	safb	99	63.188	ENSELUG00000022327	safb	99	63.170	Esox_lucius
ENSONIG00000002318	safb	67	43.339	ENSFCAG00000011835	SAFB	95	41.767	Felis_catus
ENSONIG00000002318	safb	65	44.054	ENSFALG00000013882	-	87	45.796	Ficedula_albicollis
ENSONIG00000002318	safb	100	67.461	ENSFHEG00000004219	safb	100	68.057	Fundulus_heteroclitus
ENSONIG00000002318	safb	100	66.088	ENSGMOG00000014280	safb	100	66.435	Gadus_morhua
ENSONIG00000002318	safb	66	45.161	ENSGALG00000013365	-	97	46.595	Gallus_gallus
ENSONIG00000002318	safb	64	45.070	ENSGALG00000001948	-	90	48.783	Gallus_gallus
ENSONIG00000002318	safb	100	65.362	ENSGAFG00000016162	safb	100	65.057	Gambusia_affinis
ENSONIG00000002318	safb	100	74.682	ENSGACG00000011385	safb	100	74.335	Gasterosteus_aculeatus
ENSONIG00000002318	safb	66	50.166	ENSGAGG00000017702	-	90	52.437	Gopherus_agassizii
ENSONIG00000002318	safb	95	50.330	ENSGAGG00000008424	-	95	50.960	Gopherus_agassizii
ENSONIG00000002318	safb	66	44.059	ENSGGOG00000015109	SAFB	95	42.418	Gorilla_gorilla
ENSONIG00000002318	safb	100	84.431	ENSHBUG00000009218	safb	100	84.910	Haplochromis_burtoni
ENSONIG00000002318	safb	64	41.842	ENSHGLG00000015883	SAFB	94	40.777	Heterocephalus_glaber_female
ENSONIG00000002318	safb	94	64.141	ENSHCOG00000001705	safb	99	65.234	Hippocampus_comes
ENSONIG00000002318	safb	99	63.337	ENSIPUG00000024869	safb2	99	63.412	Ictalurus_punctatus
ENSONIG00000002318	safb	60	41.075	ENSSTOG00000002783	SAFB	98	39.485	Ictidomys_tridecemlineatus
ENSONIG00000002318	safb	100	76.777	ENSKMAG00000022308	safb	100	76.896	Kryptolebias_marmoratus
ENSONIG00000002318	safb	100	79.083	ENSLBEG00000006015	safb	100	78.731	Labrus_bergylta
ENSONIG00000002318	safb	66	44.392	ENSLACG00000018090	SAFB	98	49.411	Latimeria_chalumnae
ENSONIG00000002318	safb	98	62.818	ENSLOCG00000003613	safb	99	63.152	Lepisosteus_oculatus
ENSONIG00000002318	safb	95	43.674	ENSLAFG00000003840	SAFB	96	43.090	Loxodonta_africana
ENSONIG00000002318	safb	66	43.499	ENSMFAG00000003885	SAFB	95	42.560	Macaca_fascicularis
ENSONIG00000002318	safb	66	44.776	ENSMMUG00000017970	SAFB	95	43.128	Macaca_mulatta
ENSONIG00000002318	safb	66	43.208	ENSMNEG00000035637	SAFB	95	42.000	Macaca_nemestrina
ENSONIG00000002318	safb	95	42.744	ENSMLEG00000038637	SAFB	95	41.425	Mandrillus_leucophaeus
ENSONIG00000002318	safb	100	82.325	ENSMAMG00000003357	safb	91	81.732	Mastacembelus_armatus
ENSONIG00000002318	safb	100	97.027	ENSMZEG00005009120	safb	100	97.027	Maylandia_zebra
ENSONIG00000002318	safb	97	42.208	ENSMGAG00000001101	-	98	45.575	Meleagris_gallopavo
ENSONIG00000002318	safb	64	45.738	ENSMGAG00000001051	-	96	47.387	Meleagris_gallopavo
ENSONIG00000002318	safb	66	43.577	ENSMICG00000008739	-	93	42.889	Microcebus_murinus
ENSONIG00000002318	safb	86	38.825	ENSMICG00000046795	-	95	40.000	Microcebus_murinus
ENSONIG00000002318	safb	94	44.027	ENSMODG00000001236	SAFB	95	41.514	Monodelphis_domestica
ENSONIG00000002318	safb	100	80.751	ENSMALG00000020330	safb	100	80.399	Monopterus_albus
ENSONIG00000002318	safb	67	41.789	ENSMPUG00000006123	SAFB	90	40.874	Mustela_putorius_furo
ENSONIG00000002318	safb	98	44.092	ENSMLUG00000001081	SAFB	95	41.794	Myotis_lucifugus
ENSONIG00000002318	safb	66	43.894	ENSNLEG00000013551	SAFB	94	43.341	Nomascus_leucogenys
ENSONIG00000002318	safb	60	40.675	ENSOPRG00000011561	-	97	40.415	Ochotona_princeps
ENSONIG00000002318	safb	64	42.763	ENSODEG00000014838	SAFB	94	40.841	Octodon_degus
ENSONIG00000002318	safb	87	39.904	ENSOCUG00000014628	SAFB	62	41.463	Oryctolagus_cuniculus
ENSONIG00000002318	safb	98	74.123	ENSORLG00000016989	safb	100	73.641	Oryzias_latipes
ENSONIG00000002318	safb	67	69.231	ENSORLG00020000404	safb	100	66.468	Oryzias_latipes_hni
ENSONIG00000002318	safb	98	74.970	ENSORLG00015010733	safb	100	74.408	Oryzias_latipes_hsok
ENSONIG00000002318	safb	100	73.603	ENSOMEG00000009066	safb	100	73.484	Oryzias_melastigma
ENSONIG00000002318	safb	64	44.371	ENSOGAG00000027769	SAFB	90	44.005	Otolemur_garnettii
ENSONIG00000002318	safb	95	40.516	ENSOARG00000007662	-	94	40.265	Ovis_aries
ENSONIG00000002318	safb	81	37.931	ENSOARG00000007856	-	100	39.366	Ovis_aries
ENSONIG00000002318	safb	66	44.554	ENSPPAG00000035129	SAFB	95	42.308	Pan_paniscus
ENSONIG00000002318	safb	67	43.339	ENSPPRG00000017197	SAFB	95	41.767	Panthera_pardus
ENSONIG00000002318	safb	66	43.942	ENSPTRG00000010335	SAFB	95	42.308	Pan_troglodytes
ENSONIG00000002318	safb	66	43.408	ENSPANG00000007770	SAFB	95	42.560	Papio_anubis
ENSONIG00000002318	safb	99	61.883	ENSPKIG00000009902	safb	99	62.065	Paramormyrops_kingsleyae
ENSONIG00000002318	safb	99	47.914	ENSPSIG00000011679	-	98	48.977	Pelodiscus_sinensis
ENSONIG00000002318	safb	99	46.220	ENSPSIG00000009367	-	96	46.120	Pelodiscus_sinensis
ENSONIG00000002318	safb	57	49.906	ENSPCIG00000009504	-	95	50.104	Phascolarctos_cinereus
ENSONIG00000002318	safb	100	67.933	ENSPFOG00000007745	safb	100	67.933	Poecilia_formosa
ENSONIG00000002318	safb	100	65.148	ENSPLAG00000001614	safb	100	65.148	Poecilia_latipinna
ENSONIG00000002318	safb	100	67.815	ENSPMEG00000021023	safb	100	67.815	Poecilia_mexicana
ENSONIG00000002318	safb	100	66.472	ENSPREG00000012496	safb	100	66.472	Poecilia_reticulata
ENSONIG00000002318	safb	66	43.528	ENSPPYG00000009428	SAFB	95	42.261	Pongo_abelii
ENSONIG00000002318	safb	64	39.769	ENSPCAG00000006475	SAFB	95	40.153	Procavia_capensis
ENSONIG00000002318	safb	95	41.742	ENSPCOG00000014090	SAFB	93	40.331	Propithecus_coquereli
ENSONIG00000002318	safb	95	40.380	ENSPVAG00000004913	SAFB	95	38.326	Pteropus_vampyrus
ENSONIG00000002318	safb	99	63.889	ENSPNAG00000021838	safb	99	64.070	Pygocentrus_nattereri
ENSONIG00000002318	safb	66	43.824	ENSRBIG00000042509	SAFB	86	44.374	Rhinopithecus_bieti
ENSONIG00000002318	safb	66	43.296	ENSRROG00000029278	SAFB	95	42.308	Rhinopithecus_roxellana
ENSONIG00000002318	safb	66	44.805	ENSSBOG00000026291	SAFB	95	42.731	Saimiri_boliviensis_boliviensis
ENSONIG00000002318	safb	99	62.171	ENSSFOG00015008156	safb	99	61.975	Scleropages_formosus
ENSONIG00000002318	safb	100	81.851	ENSSMAG00000009316	safb	100	81.851	Scophthalmus_maximus
ENSONIG00000002318	safb	100	79.499	ENSSDUG00000009652	safb	100	78.784	Seriola_dumerili
ENSONIG00000002318	safb	100	83.630	ENSSLDG00000001670	safb	100	83.155	Seriola_lalandi_dorsalis
ENSONIG00000002318	safb	60	40.418	ENSSARG00000010475	SAFB	98	39.290	Sorex_araneus
ENSONIG00000002318	safb	56	43.962	ENSSPUG00000009747	-	96	42.947	Sphenodon_punctatus
ENSONIG00000002318	safb	51	43.315	ENSSPUG00000009820	-	94	48.796	Sphenodon_punctatus
ENSONIG00000002318	safb	99	74.221	ENSSPAG00000015682	safb	99	74.221	Stegastes_partitus
ENSONIG00000002318	safb	64	43.573	ENSSSCG00000013522	SAFB	96	42.929	Sus_scrofa
ENSONIG00000002318	safb	65	43.449	ENSTGUG00000000502	-	94	46.582	Taeniopygia_guttata
ENSONIG00000002318	safb	64	44.240	ENSTGUG00000000489	-	96	50.117	Taeniopygia_guttata
ENSONIG00000002318	safb	100	75.030	ENSTRUG00000003567	safb	100	74.792	Takifugu_rubripes
ENSONIG00000002318	safb	91	63.293	ENSTNIG00000015470	safb	100	64.024	Tetraodon_nigroviridis
ENSONIG00000002318	safb	79	75.000	ENSTTRG00000013588	SAFB	71	75.000	Tursiops_truncatus
ENSONIG00000002318	safb	74	43.719	ENSUMAG00000009734	SAFB	87	42.881	Ursus_maritimus
ENSONIG00000002318	safb	67	43.499	ENSVVUG00000013720	SAFB	83	41.939	Vulpes_vulpes
ENSONIG00000002318	safb	64	45.378	ENSXETG00000008755	safb	95	47.485	Xenopus_tropicalis
ENSONIG00000002318	safb	100	68.052	ENSXMAG00000003458	safb	100	68.052	Xiphophorus_maculatus