EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000002490 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-63e15.2
Alias: -
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 62329 bases
Position: chrGL831140.1:5690164-5752492
Accession: 100696423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000003119	ResIII	PF04851.15	2.2e-07	1	1
ENSONIP00000003118	ResIII	PF04851.15	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000003120	-	3753	-	ENSONIP00000003119	1251 (aa)	-	I3J2M9
ENSONIT00000003119	-	8724	XM_013267742	ENSONIP00000003118	1579 (aa)	XP_013123196	I3J2M8

Gene Model

Click here to download ENSONIG00000002490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000002490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000002490	si:ch73-63e15.2	76	63.991	ENSONIG00000015348	sbno1	69	63.991

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000002490	si:ch73-63e15.2	92	67.692	ENSG00000064932	SBNO2	87	68.810	Homo_sapiens
ENSONIG00000002490	si:ch73-63e15.2	99	89.505	ENSAPOG00000003185	si:ch73-63e15.2	100	83.022	Acanthochromis_polyacanthus
ENSONIG00000002490	si:ch73-63e15.2	99	90.160	ENSAOCG00000016581	si:ch73-63e15.2	100	83.410	Amphiprion_ocellaris
ENSONIG00000002490	si:ch73-63e15.2	99	89.924	ENSAPEG00000008862	si:ch73-63e15.2	100	83.278	Amphiprion_percula
ENSONIG00000002490	si:ch73-63e15.2	99	86.156	ENSATEG00000023838	si:ch73-63e15.2	99	82.904	Anabas_testudineus
ENSONIG00000002490	si:ch73-63e15.2	96	69.038	ENSAPLG00000007158	SBNO2	94	68.957	Anas_platyrhynchos
ENSONIG00000002490	si:ch73-63e15.2	92	67.179	ENSANAG00000026685	SBNO2	88	68.549	Aotus_nancymaae
ENSONIG00000002490	si:ch73-63e15.2	100	97.785	ENSACLG00000005090	si:ch73-63e15.2	100	97.785	Astatotilapia_calliptera
ENSONIG00000002490	si:ch73-63e15.2	99	74.627	ENSAMXG00000018868	sbno2a	96	79.855	Astyanax_mexicanus
ENSONIG00000002490	si:ch73-63e15.2	98	76.621	ENSAMXG00000015881	si:ch73-63e15.2	98	77.548	Astyanax_mexicanus
ENSONIG00000002490	si:ch73-63e15.2	97	65.944	ENSBTAG00000020780	SBNO2	92	65.595	Bos_taurus
ENSONIG00000002490	si:ch73-63e15.2	91	69.449	ENSCAFG00000019543	SBNO2	84	69.072	Canis_familiaris
ENSONIG00000002490	si:ch73-63e15.2	91	69.449	ENSCAFG00020017115	SBNO2	89	69.072	Canis_lupus_dingo
ENSONIG00000002490	si:ch73-63e15.2	96	66.612	ENSCHIG00000026127	SBNO2	86	69.471	Capra_hircus
ENSONIG00000002490	si:ch73-63e15.2	89	67.046	ENSCAPG00000005731	SBNO2	95	66.523	Cavia_aperea
ENSONIG00000002490	si:ch73-63e15.2	90	67.015	ENSCPOG00000007477	SBNO2	86	66.810	Cavia_porcellus
ENSONIG00000002490	si:ch73-63e15.2	93	66.808	ENSCCAG00000037518	SBNO2	89	68.162	Cebus_capucinus
ENSONIG00000002490	si:ch73-63e15.2	92	67.891	ENSCATG00000037046	SBNO2	87	68.897	Cercocebus_atys
ENSONIG00000002490	si:ch73-63e15.2	92	67.551	ENSCLAG00000010178	SBNO2	98	69.325	Chinchilla_lanigera
ENSONIG00000002490	si:ch73-63e15.2	91	68.417	ENSCSAG00000012317	SBNO2	84	68.745	Chlorocebus_sabaeus
ENSONIG00000002490	si:ch73-63e15.2	91	70.460	ENSCPBG00000008920	SBNO2	80	82.658	Chrysemys_picta_bellii
ENSONIG00000002490	si:ch73-63e15.2	88	67.647	ENSCANG00000036745	SBNO2	95	68.693	Colobus_angolensis_palliatus
ENSONIG00000002490	si:ch73-63e15.2	91	66.437	ENSCGRG00001023960	Sbno2	89	65.153	Cricetulus_griseus_chok1gshd
ENSONIG00000002490	si:ch73-63e15.2	91	67.931	ENSCGRG00000011984	Sbno2	89	66.584	Cricetulus_griseus_crigri
ENSONIG00000002490	si:ch73-63e15.2	94	83.529	ENSCSEG00000006856	si:ch73-63e15.2	96	86.993	Cynoglossus_semilaevis
ENSONIG00000002490	si:ch73-63e15.2	98	87.373	ENSCVAG00000005663	si:ch73-63e15.2	100	77.474	Cyprinodon_variegatus
ENSONIG00000002490	si:ch73-63e15.2	99	76.247	ENSDARG00000016188	SBNO2	90	76.564	Danio_rerio
ENSONIG00000002490	si:ch73-63e15.2	100	74.882	ENSDARG00000098801	sbno2a	94	74.827	Danio_rerio
ENSONIG00000002490	si:ch73-63e15.2	91	69.411	ENSDORG00000002916	Sbno2	85	69.297	Dipodomys_ordii
ENSONIG00000002490	si:ch73-63e15.2	92	68.178	ENSEASG00005021621	SBNO2	93	64.766	Equus_asinus_asinus
ENSONIG00000002490	si:ch73-63e15.2	92	68.263	ENSECAG00000011827	SBNO2	93	64.846	Equus_caballus
ENSONIG00000002490	si:ch73-63e15.2	99	80.234	ENSELUG00000020457	si:ch73-63e15.2	100	73.089	Esox_lucius
ENSONIG00000002490	si:ch73-63e15.2	97	68.740	ENSFALG00000013988	SBNO2	90	68.077	Ficedula_albicollis
ENSONIG00000002490	si:ch73-63e15.2	88	66.844	ENSFDAG00000015186	SBNO2	86	67.286	Fukomys_damarensis
ENSONIG00000002490	si:ch73-63e15.2	95	86.527	ENSFHEG00000022262	si:ch73-63e15.2	100	77.409	Fundulus_heteroclitus
ENSONIG00000002490	si:ch73-63e15.2	91	86.479	ENSGMOG00000007542	si:ch73-63e15.2	95	87.014	Gadus_morhua
ENSONIG00000002490	si:ch73-63e15.2	97	68.745	ENSGALG00000037522	SBNO2	89	68.665	Gallus_gallus
ENSONIG00000002490	si:ch73-63e15.2	92	88.266	ENSGAFG00000004860	si:ch73-63e15.2	93	86.874	Gambusia_affinis
ENSONIG00000002490	si:ch73-63e15.2	91	87.630	ENSGACG00000013190	si:ch73-63e15.2	96	87.457	Gasterosteus_aculeatus
ENSONIG00000002490	si:ch73-63e15.2	97	69.348	ENSGAGG00000008348	SBNO2	91	69.268	Gopherus_agassizii
ENSONIG00000002490	si:ch73-63e15.2	100	97.785	ENSHBUG00000010742	si:ch73-63e15.2	100	97.933	Haplochromis_burtoni
ENSONIG00000002490	si:ch73-63e15.2	90	68.815	ENSHGLG00000008739	SBNO2	85	68.653	Heterocephalus_glaber_female
ENSONIG00000002490	si:ch73-63e15.2	90	68.663	ENSHGLG00100005269	SBNO2	98	69.110	Heterocephalus_glaber_male
ENSONIG00000002490	si:ch73-63e15.2	86	87.315	ENSHCOG00000000884	si:ch73-63e15.2	95	78.830	Hippocampus_comes
ENSONIG00000002490	si:ch73-63e15.2	96	78.453	ENSIPUG00000000537	si:ch73-63e15.2	91	77.115	Ictalurus_punctatus
ENSONIG00000002490	si:ch73-63e15.2	99	75.848	ENSIPUG00000019672	sbno2	99	75.427	Ictalurus_punctatus
ENSONIG00000002490	si:ch73-63e15.2	96	66.393	ENSSTOG00000025832	SBNO2	91	65.787	Ictidomys_tridecemlineatus
ENSONIG00000002490	si:ch73-63e15.2	91	65.665	ENSJJAG00000017397	Sbno2	93	62.109	Jaculus_jaculus
ENSONIG00000002490	si:ch73-63e15.2	94	87.276	ENSKMAG00000005541	si:ch73-63e15.2	100	78.350	Kryptolebias_marmoratus
ENSONIG00000002490	si:ch73-63e15.2	98	87.858	ENSLBEG00000025016	si:ch73-63e15.2	99	87.407	Labrus_bergylta
ENSONIG00000002490	si:ch73-63e15.2	51	81.259	ENSLBEG00000005937	-	100	82.273	Labrus_bergylta
ENSONIG00000002490	si:ch73-63e15.2	52	68.843	ENSLACG00000012598	SBNO2	97	71.595	Latimeria_chalumnae
ENSONIG00000002490	si:ch73-63e15.2	98	80.468	ENSLOCG00000004643	si:ch73-63e15.2	90	80.468	Lepisosteus_oculatus
ENSONIG00000002490	si:ch73-63e15.2	90	65.187	ENSLAFG00000008824	SBNO2	89	65.617	Loxodonta_africana
ENSONIG00000002490	si:ch73-63e15.2	92	66.468	ENSMFAG00000040030	SBNO2	89	67.188	Macaca_fascicularis
ENSONIG00000002490	si:ch73-63e15.2	91	68.417	ENSMMUG00000010886	SBNO2	88	67.244	Macaca_mulatta
ENSONIG00000002490	si:ch73-63e15.2	92	67.720	ENSMNEG00000039927	SBNO2	87	68.723	Macaca_nemestrina
ENSONIG00000002490	si:ch73-63e15.2	84	69.030	ENSMLEG00000038556	SBNO2	98	65.232	Mandrillus_leucophaeus
ENSONIG00000002490	si:ch73-63e15.2	95	88.571	ENSMAMG00000018758	si:ch73-63e15.2	100	79.831	Mastacembelus_armatus
ENSONIG00000002490	si:ch73-63e15.2	100	97.847	ENSMZEG00005010682	si:ch73-63e15.2	100	97.847	Maylandia_zebra
ENSONIG00000002490	si:ch73-63e15.2	92	70.773	ENSMGAG00000003801	SBNO2	90	71.429	Meleagris_gallopavo
ENSONIG00000002490	si:ch73-63e15.2	91	67.728	ENSMAUG00000008034	Sbno2	88	66.999	Mesocricetus_auratus
ENSONIG00000002490	si:ch73-63e15.2	91	68.544	ENSMICG00000013071	SBNO2	88	68.576	Microcebus_murinus
ENSONIG00000002490	si:ch73-63e15.2	91	68.394	ENSMOCG00000010504	Sbno2	89	66.914	Microtus_ochrogaster
ENSONIG00000002490	si:ch73-63e15.2	98	67.903	ENSMODG00000005382	SBNO2	89	66.824	Monodelphis_domestica
ENSONIG00000002490	si:ch73-63e15.2	76	81.454	ENSMALG00000021831	si:ch73-63e15.2	99	81.732	Monopterus_albus
ENSONIG00000002490	si:ch73-63e15.2	91	68.225	ENSMUSG00000035673	Sbno2	97	66.639	Mus_musculus
ENSONIG00000002490	si:ch73-63e15.2	91	68.312	MGP_PahariEiJ_G0030976	Sbno2	89	66.557	Mus_pahari
ENSONIG00000002490	si:ch73-63e15.2	91	68.312	MGP_SPRETEiJ_G0016381	Sbno2	95	66.557	Mus_spretus
ENSONIG00000002490	si:ch73-63e15.2	78	71.100	ENSMPUG00000008747	SBNO2	99	67.034	Mustela_putorius_furo
ENSONIG00000002490	si:ch73-63e15.2	91	67.928	ENSNGAG00000004308	Sbno2	90	66.170	Nannospalax_galili
ENSONIG00000002490	si:ch73-63e15.2	88	96.757	ENSNBRG00000022968	si:ch73-63e15.2	99	98.361	Neolamprologus_brichardi
ENSONIG00000002490	si:ch73-63e15.2	87	69.267	ENSNLEG00000001305	SBNO2	89	69.267	Nomascus_leucogenys
ENSONIG00000002490	si:ch73-63e15.2	74	67.304	ENSMEUG00000013511	-	78	66.985	Notamacropus_eugenii
ENSONIG00000002490	si:ch73-63e15.2	90	67.885	ENSOPRG00000017238	SBNO2	93	68.416	Ochotona_princeps
ENSONIG00000002490	si:ch73-63e15.2	91	67.212	ENSODEG00000011822	SBNO2	86	67.356	Octodon_degus
ENSONIG00000002490	si:ch73-63e15.2	98	86.869	ENSORLG00000000913	si:ch73-63e15.2	99	78.709	Oryzias_latipes
ENSONIG00000002490	si:ch73-63e15.2	98	86.785	ENSORLG00020010978	si:ch73-63e15.2	100	78.286	Oryzias_latipes_hni
ENSONIG00000002490	si:ch73-63e15.2	98	85.940	ENSORLG00015000202	si:ch73-63e15.2	100	78.760	Oryzias_latipes_hsok
ENSONIG00000002490	si:ch73-63e15.2	98	86.390	ENSOMEG00000000359	si:ch73-63e15.2	100	78.026	Oryzias_melastigma
ENSONIG00000002490	si:ch73-63e15.2	91	66.955	ENSOARG00000011130	SBNO2	93	63.341	Ovis_aries
ENSONIG00000002490	si:ch73-63e15.2	92	66.780	ENSPPAG00000032482	SBNO2	90	67.873	Pan_paniscus
ENSONIG00000002490	si:ch73-63e15.2	92	67.692	ENSPTRG00000010185	SBNO2	88	68.158	Pan_troglodytes
ENSONIG00000002490	si:ch73-63e15.2	92	64.475	ENSPANG00000009658	SBNO2	87	65.421	Papio_anubis
ENSONIG00000002490	si:ch73-63e15.2	81	79.024	ENSPKIG00000009707	-	87	77.081	Paramormyrops_kingsleyae
ENSONIG00000002490	si:ch73-63e15.2	96	79.570	ENSPKIG00000024201	si:ch73-63e15.2	89	78.433	Paramormyrops_kingsleyae
ENSONIG00000002490	si:ch73-63e15.2	77	73.360	ENSPSIG00000002852	SBNO2	99	73.679	Pelodiscus_sinensis
ENSONIG00000002490	si:ch73-63e15.2	95	81.910	ENSPMGG00000014375	si:ch73-63e15.2	91	81.575	Periophthalmus_magnuspinnatus
ENSONIG00000002490	si:ch73-63e15.2	91	66.898	ENSPEMG00000024122	Sbno2	89	64.921	Peromyscus_maniculatus_bairdii
ENSONIG00000002490	si:ch73-63e15.2	96	68.395	ENSPCIG00000011264	SBNO2	89	67.299	Phascolarctos_cinereus
ENSONIG00000002490	si:ch73-63e15.2	94	87.871	ENSPFOG00000004096	si:ch73-63e15.2	100	86.340	Poecilia_formosa
ENSONIG00000002490	si:ch73-63e15.2	94	87.786	ENSPLAG00000014653	si:ch73-63e15.2	100	77.469	Poecilia_latipinna
ENSONIG00000002490	si:ch73-63e15.2	94	87.786	ENSPMEG00000002129	si:ch73-63e15.2	96	82.600	Poecilia_mexicana
ENSONIG00000002490	si:ch73-63e15.2	94	87.956	ENSPREG00000006755	si:ch73-63e15.2	100	76.685	Poecilia_reticulata
ENSONIG00000002490	si:ch73-63e15.2	85	68.241	ENSPCAG00000012256	SBNO2	79	68.534	Procavia_capensis
ENSONIG00000002490	si:ch73-63e15.2	91	62.630	ENSPCOG00000015216	SBNO2	90	60.000	Propithecus_coquereli
ENSONIG00000002490	si:ch73-63e15.2	100	97.973	ENSPNYG00000019926	si:ch73-63e15.2	100	98.065	Pundamilia_nyererei
ENSONIG00000002490	si:ch73-63e15.2	98	75.363	ENSPNAG00000026609	sbno2a	99	68.109	Pygocentrus_nattereri
ENSONIG00000002490	si:ch73-63e15.2	98	77.893	ENSPNAG00000020260	si:ch73-63e15.2	89	78.100	Pygocentrus_nattereri
ENSONIG00000002490	si:ch73-63e15.2	91	68.485	ENSRNOG00000013987	Sbno2	89	68.870	Rattus_norvegicus
ENSONIG00000002490	si:ch73-63e15.2	85	66.359	ENSRBIG00000009740	SBNO2	87	65.989	Rhinopithecus_bieti
ENSONIG00000002490	si:ch73-63e15.2	81	69.964	ENSRROG00000044671	SBNO2	85	71.429	Rhinopithecus_roxellana
ENSONIG00000002490	si:ch73-63e15.2	92	66.752	ENSSBOG00000023562	SBNO2	88	68.115	Saimiri_boliviensis_boliviensis
ENSONIG00000002490	si:ch73-63e15.2	89	71.378	ENSSHAG00000010241	SBNO2	97	71.403	Sarcophilus_harrisii
ENSONIG00000002490	si:ch73-63e15.2	98	74.901	ENSSFOG00015005861	si:ch73-63e15.2	95	80.494	Scleropages_formosus
ENSONIG00000002490	si:ch73-63e15.2	99	88.349	ENSSMAG00000012489	si:ch73-63e15.2	99	80.548	Scophthalmus_maximus
ENSONIG00000002490	si:ch73-63e15.2	99	89.412	ENSSDUG00000003527	si:ch73-63e15.2	100	81.536	Seriola_dumerili
ENSONIG00000002490	si:ch73-63e15.2	99	89.346	ENSSLDG00000004623	si:ch73-63e15.2	100	81.343	Seriola_lalandi_dorsalis
ENSONIG00000002490	si:ch73-63e15.2	99	89.169	ENSSPAG00000017717	si:ch73-63e15.2	100	82.241	Stegastes_partitus
ENSONIG00000002490	si:ch73-63e15.2	92	68.399	ENSSSCG00000030042	SBNO2	89	69.391	Sus_scrofa
ENSONIG00000002490	si:ch73-63e15.2	90	86.673	ENSTRUG00000018193	si:ch73-63e15.2	86	88.347	Takifugu_rubripes
ENSONIG00000002490	si:ch73-63e15.2	83	70.047	ENSUAMG00000006568	SBNO2	93	71.247	Ursus_americanus
ENSONIG00000002490	si:ch73-63e15.2	91	69.330	ENSVVUG00000022823	SBNO2	82	69.697	Vulpes_vulpes
ENSONIG00000002490	si:ch73-63e15.2	82	75.101	ENSXETG00000021579	sbno2	91	75.304	Xenopus_tropicalis
ENSONIG00000002490	si:ch73-63e15.2	83	86.484	ENSXCOG00000009209	si:ch73-63e15.2	94	88.679	Xiphophorus_couchianus
ENSONIG00000002490	si:ch73-63e15.2	95	87.205	ENSXMAG00000012091	si:ch73-63e15.2	89	89.152	Xiphophorus_maculatus