EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSONIG00000002635 (Gene tree)
Gene ID: 100709368
Gene Symbol: lsg1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 6114 bases
Position: chrGL831309.1:513913-520026
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000003300	MMR_HSR1	PF01926.23	3.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000003301	-	1941	-	ENSONIP00000003300	646 (aa)	-	I3J360

Gene Model

Click here to download ENSONIG00000002635's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000002635's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000002635	lsg1	99	64.297	ENSG00000041802	LSG1	98	74.713	Homo_sapiens
ENSONIG00000002635	lsg1	100	81.356	ENSAPOG00000009694	lsg1	100	80.586	Acanthochromis_polyacanthus
ENSONIG00000002635	lsg1	100	63.284	ENSAMEG00000009343	LSG1	100	62.836	Ailuropoda_melanoleuca
ENSONIG00000002635	lsg1	98	90.551	ENSACIG00000012406	lsg1	100	89.660	Amphilophus_citrinellus
ENSONIG00000002635	lsg1	100	81.164	ENSAOCG00000016066	lsg1	100	80.740	Amphiprion_ocellaris
ENSONIG00000002635	lsg1	100	81.011	ENSAPEG00000003252	lsg1	100	80.586	Amphiprion_percula
ENSONIG00000002635	lsg1	98	83.412	ENSATEG00000011794	lsg1	100	82.663	Anabas_testudineus
ENSONIG00000002635	lsg1	95	61.575	ENSACAG00000004222	LSG1	100	61.406	Anolis_carolinensis
ENSONIG00000002635	lsg1	99	65.053	ENSANAG00000021153	LSG1	99	64.103	Aotus_nancymaae
ENSONIG00000002635	lsg1	100	95.872	ENSACLG00000000520	lsg1	100	95.872	Astatotilapia_calliptera
ENSONIG00000002635	lsg1	100	74.846	ENSAMXG00000008271	lsg1	100	74.462	Astyanax_mexicanus
ENSONIG00000002635	lsg1	99	64.962	ENSBTAG00000008461	LSG1	99	63.801	Bos_taurus
ENSONIG00000002635	lsg1	75	45.852	WBGene00016907	C53H9.2	94	51.449	Caenorhabditis_elegans
ENSONIG00000002635	lsg1	99	64.902	ENSCJAG00000013962	LSG1	99	64.103	Callithrix_jacchus
ENSONIG00000002635	lsg1	95	63.823	ENSCAFG00000013445	LSG1	100	62.826	Canis_familiaris
ENSONIG00000002635	lsg1	100	63.404	ENSCAFG00020002216	LSG1	100	62.463	Canis_lupus_dingo
ENSONIG00000002635	lsg1	100	64.848	ENSCHIG00000015769	LSG1	100	64.134	Capra_hircus
ENSONIG00000002635	lsg1	99	63.293	ENSTSYG00000001447	LSG1	99	63.554	Carlito_syrichta
ENSONIG00000002635	lsg1	95	64.103	ENSCAPG00000009856	LSG1	99	65.147	Cavia_aperea
ENSONIG00000002635	lsg1	99	64.297	ENSCCAG00000035744	LSG1	99	63.348	Cebus_capucinus
ENSONIG00000002635	lsg1	99	63.556	ENSCATG00000042060	LSG1	99	62.048	Cercocebus_atys
ENSONIG00000002635	lsg1	99	63.407	ENSCSAG00000008796	LSG1	92	63.008	Chlorocebus_sabaeus
ENSONIG00000002635	lsg1	100	66.617	ENSCPBG00000015941	LSG1	83	65.579	Chrysemys_picta_bellii
ENSONIG00000002635	lsg1	75	53.012	ENSCING00000007079	-	94	59.296	Ciona_intestinalis
ENSONIG00000002635	lsg1	78	54.217	ENSCSAVG00000002514	-	97	54.217	Ciona_savignyi
ENSONIG00000002635	lsg1	99	63.994	ENSCANG00000030709	LSG1	99	62.952	Colobus_angolensis_palliatus
ENSONIG00000002635	lsg1	99	64.067	ENSCGRG00001019846	Lsg1	99	64.067	Cricetulus_griseus_chok1gshd
ENSONIG00000002635	lsg1	99	64.067	ENSCGRG00000014617	Lsg1	99	63.705	Cricetulus_griseus_crigri
ENSONIG00000002635	lsg1	98	78.858	ENSCSEG00000008522	lsg1	100	78.669	Cynoglossus_semilaevis
ENSONIG00000002635	lsg1	98	81.746	ENSCVAG00000002484	lsg1	100	81.579	Cyprinodon_variegatus
ENSONIG00000002635	lsg1	100	75.692	ENSDARG00000015352	lsg1	100	75.538	Danio_rerio
ENSONIG00000002635	lsg1	99	63.554	ENSDNOG00000006224	LSG1	99	63.363	Dasypus_novemcinctus
ENSONIG00000002635	lsg1	99	49.617	FBgn0266284	Ns3	99	48.851	Drosophila_melanogaster
ENSONIG00000002635	lsg1	88	74.667	ENSETEG00000003888	LSG1	89	74.667	Echinops_telfairi
ENSONIG00000002635	lsg1	88	57.191	ENSEBUG00000003119	lsg1	85	56.500	Eptatretus_burgeri
ENSONIG00000002635	lsg1	99	62.832	ENSEASG00005000678	LSG1	99	63.827	Equus_asinus_asinus
ENSONIG00000002635	lsg1	99	63.127	ENSECAG00000017659	LSG1	99	63.855	Equus_caballus
ENSONIG00000002635	lsg1	86	59.829	ENSEEUG00000015217	LSG1	87	59.829	Erinaceus_europaeus
ENSONIG00000002635	lsg1	100	71.861	ENSELUG00000023973	lsg1	100	71.558	Esox_lucius
ENSONIG00000002635	lsg1	100	64.103	ENSFCAG00000024957	LSG1	100	63.433	Felis_catus
ENSONIG00000002635	lsg1	99	59.077	ENSFALG00000007210	LSG1	99	59.636	Ficedula_albicollis
ENSONIG00000002635	lsg1	99	63.939	ENSFDAG00000017373	LSG1	99	64.242	Fukomys_damarensis
ENSONIG00000002635	lsg1	98	81.804	ENSFHEG00000003680	lsg1	100	81.972	Fundulus_heteroclitus
ENSONIG00000002635	lsg1	87	80.478	ENSGMOG00000015834	lsg1	91	79.121	Gadus_morhua
ENSONIG00000002635	lsg1	99	60.629	ENSGALG00000007058	LSG1	87	60.994	Gallus_gallus
ENSONIG00000002635	lsg1	98	81.804	ENSGAFG00000015831	lsg1	100	81.327	Gambusia_affinis
ENSONIG00000002635	lsg1	98	80.908	ENSGACG00000009323	lsg1	100	79.728	Gasterosteus_aculeatus
ENSONIG00000002635	lsg1	99	63.704	ENSGGOG00000000520	LSG1	99	63.746	Gorilla_gorilla
ENSONIG00000002635	lsg1	100	97.059	ENSHBUG00000005659	lsg1	100	97.059	Haplochromis_burtoni
ENSONIG00000002635	lsg1	99	61.927	ENSHGLG00000017390	LSG1	99	62.727	Heterocephalus_glaber_female
ENSONIG00000002635	lsg1	99	61.927	ENSHGLG00100018587	LSG1	99	62.727	Heterocephalus_glaber_male
ENSONIG00000002635	lsg1	98	78.560	ENSHCOG00000016848	lsg1	100	78.473	Hippocampus_comes
ENSONIG00000002635	lsg1	100	74.000	ENSIPUG00000008631	lsg1	100	73.394	Ictalurus_punctatus
ENSONIG00000002635	lsg1	75	58.333	ENSSTOG00000010234	LSG1	92	59.091	Ictidomys_tridecemlineatus
ENSONIG00000002635	lsg1	99	65.692	ENSJJAG00000015513	Lsg1	99	65.432	Jaculus_jaculus
ENSONIG00000002635	lsg1	98	76.887	ENSKMAG00000009681	lsg1	100	77.280	Kryptolebias_marmoratus
ENSONIG00000002635	lsg1	98	78.233	ENSLBEG00000024261	lsg1	100	78.516	Labrus_bergylta
ENSONIG00000002635	lsg1	100	66.567	ENSLACG00000013399	LSG1	100	66.866	Latimeria_chalumnae
ENSONIG00000002635	lsg1	98	71.607	ENSLOCG00000004918	lsg1	100	71.104	Lepisosteus_oculatus
ENSONIG00000002635	lsg1	99	64.404	ENSLAFG00000012919	-	99	63.952	Loxodonta_africana
ENSONIG00000002635	lsg1	99	63.407	ENSMFAG00000039903	LSG1	99	61.898	Macaca_fascicularis
ENSONIG00000002635	lsg1	99	63.407	ENSMMUG00000010708	LSG1	99	63.253	Macaca_mulatta
ENSONIG00000002635	lsg1	99	63.407	ENSMNEG00000031538	LSG1	99	62.199	Macaca_nemestrina
ENSONIG00000002635	lsg1	99	63.259	ENSMLEG00000041184	LSG1	99	63.253	Mandrillus_leucophaeus
ENSONIG00000002635	lsg1	100	79.570	ENSMAMG00000000470	lsg1	100	78.234	Mastacembelus_armatus
ENSONIG00000002635	lsg1	100	97.059	ENSMZEG00005017865	lsg1	100	97.059	Maylandia_zebra
ENSONIG00000002635	lsg1	88	62.542	ENSMGAG00000007050	LSG1	99	62.881	Meleagris_gallopavo
ENSONIG00000002635	lsg1	91	63.149	ENSMAUG00000016976	Lsg1	93	63.317	Mesocricetus_auratus
ENSONIG00000002635	lsg1	99	62.631	ENSMICG00000049087	LSG1	99	63.063	Microcebus_murinus
ENSONIG00000002635	lsg1	99	62.930	ENSMOCG00000022136	Lsg1	99	63.914	Microtus_ochrogaster
ENSONIG00000002635	lsg1	86	90.417	ENSMMOG00000008884	lsg1	100	76.316	Mola_mola
ENSONIG00000002635	lsg1	99	55.760	ENSMODG00000019828	LSG1	99	54.992	Monodelphis_domestica
ENSONIG00000002635	lsg1	100	64.438	MGP_CAROLIEiJ_G0020648	Lsg1	100	64.590	Mus_caroli
ENSONIG00000002635	lsg1	100	63.830	ENSMUSG00000022538	Lsg1	100	63.982	Mus_musculus
ENSONIG00000002635	lsg1	98	63.538	MGP_PahariEiJ_G0016352	Lsg1	100	63.348	Mus_pahari
ENSONIG00000002635	lsg1	100	64.384	MGP_SPRETEiJ_G0021544	Lsg1	100	64.384	Mus_spretus
ENSONIG00000002635	lsg1	100	63.855	ENSMPUG00000003734	LSG1	100	63.910	Mustela_putorius_furo
ENSONIG00000002635	lsg1	100	64.318	ENSMLUG00000012548	LSG1	100	64.018	Myotis_lucifugus
ENSONIG00000002635	lsg1	99	63.524	ENSNGAG00000021872	Lsg1	99	62.369	Nannospalax_galili
ENSONIG00000002635	lsg1	99	63.868	ENSNLEG00000008293	LSG1	99	63.952	Nomascus_leucogenys
ENSONIG00000002635	lsg1	68	68.041	ENSMEUG00000009041	-	84	68.041	Notamacropus_eugenii
ENSONIG00000002635	lsg1	95	67.299	ENSOANG00000012742	LSG1	99	66.352	Ornithorhynchus_anatinus
ENSONIG00000002635	lsg1	99	63.988	ENSOCUG00000004817	LSG1	99	64.458	Oryctolagus_cuniculus
ENSONIG00000002635	lsg1	98	78.199	ENSORLG00000007695	lsg1	100	77.864	Oryzias_latipes
ENSONIG00000002635	lsg1	98	78.673	ENSORLG00020016286	lsg1	100	78.173	Oryzias_latipes_hni
ENSONIG00000002635	lsg1	98	77.093	ENSORLG00015012025	lsg1	100	77.245	Oryzias_latipes_hsok
ENSONIG00000002635	lsg1	98	77.409	ENSOMEG00000022379	lsg1	100	77.504	Oryzias_melastigma
ENSONIG00000002635	lsg1	99	63.348	ENSOGAG00000003475	LSG1	99	63.459	Otolemur_garnettii
ENSONIG00000002635	lsg1	100	64.565	ENSOARG00000020403	LSG1	100	63.253	Ovis_aries
ENSONIG00000002635	lsg1	99	64.339	ENSPPAG00000029271	LSG1	99	63.897	Pan_paniscus
ENSONIG00000002635	lsg1	100	63.018	ENSPPRG00000010281	LSG1	100	63.056	Panthera_pardus
ENSONIG00000002635	lsg1	100	63.393	ENSPTIG00000010789	LSG1	100	63.433	Panthera_tigris_altaica
ENSONIG00000002635	lsg1	99	64.042	ENSPTRG00000015760	LSG1	99	63.746	Pan_troglodytes
ENSONIG00000002635	lsg1	99	63.259	ENSPANG00000018249	LSG1	99	61.747	Papio_anubis
ENSONIG00000002635	lsg1	99	71.407	ENSPKIG00000002895	lsg1	99	72.504	Paramormyrops_kingsleyae
ENSONIG00000002635	lsg1	96	60.976	ENSPSIG00000009821	LSG1	99	60.775	Pelodiscus_sinensis
ENSONIG00000002635	lsg1	95	77.073	ENSPMGG00000000931	lsg1	100	76.748	Periophthalmus_magnuspinnatus
ENSONIG00000002635	lsg1	99	63.817	ENSPEMG00000012082	-	99	62.651	Peromyscus_maniculatus_bairdii
ENSONIG00000002635	lsg1	99	60.386	ENSPMAG00000007451	lsg1	99	60.209	Petromyzon_marinus
ENSONIG00000002635	lsg1	98	64.062	ENSPCIG00000013890	LSG1	82	64.062	Phascolarctos_cinereus
ENSONIG00000002635	lsg1	98	82.278	ENSPFOG00000021882	lsg1	100	82.099	Poecilia_formosa
ENSONIG00000002635	lsg1	98	81.329	ENSPLAG00000019536	lsg1	100	80.864	Poecilia_latipinna
ENSONIG00000002635	lsg1	98	81.230	ENSPMEG00000017281	lsg1	100	81.385	Poecilia_mexicana
ENSONIG00000002635	lsg1	98	69.767	ENSPREG00000006048	lsg1	100	69.592	Poecilia_reticulata
ENSONIG00000002635	lsg1	92	63.005	ENSPPYG00000014425	LSG1	100	62.418	Pongo_abelii
ENSONIG00000002635	lsg1	89	72.000	ENSPCAG00000005511	LSG1	81	72.000	Procavia_capensis
ENSONIG00000002635	lsg1	99	62.991	ENSPCOG00000012360	LSG1	99	62.930	Propithecus_coquereli
ENSONIG00000002635	lsg1	100	95.872	ENSPNYG00000021994	lsg1	100	95.872	Pundamilia_nyererei
ENSONIG00000002635	lsg1	100	75.191	ENSPNAG00000015533	lsg1	100	75.038	Pygocentrus_nattereri
ENSONIG00000002635	lsg1	99	63.056	ENSRBIG00000029053	LSG1	99	63.293	Rhinopithecus_bieti
ENSONIG00000002635	lsg1	99	63.056	ENSRROG00000037702	LSG1	99	63.293	Rhinopithecus_roxellana
ENSONIG00000002635	lsg1	78	44.856	YGL099W	LSG1	70	53.889	Saccharomyces_cerevisiae
ENSONIG00000002635	lsg1	99	65.053	ENSSBOG00000034938	LSG1	99	64.103	Saimiri_boliviensis_boliviensis
ENSONIG00000002635	lsg1	78	62.004	ENSSHAG00000003487	LSG1	100	62.214	Sarcophilus_harrisii
ENSONIG00000002635	lsg1	98	73.028	ENSSFOG00015008955	lsg1	100	73.344	Scleropages_formosus
ENSONIG00000002635	lsg1	98	86.299	ENSSDUG00000004622	lsg1	100	85.781	Seriola_dumerili
ENSONIG00000002635	lsg1	98	84.094	ENSSLDG00000010869	lsg1	100	83.617	Seriola_lalandi_dorsalis
ENSONIG00000002635	lsg1	82	66.374	ENSSARG00000012981	LSG1	83	63.333	Sorex_araneus
ENSONIG00000002635	lsg1	100	66.667	ENSSPUG00000016347	LSG1	100	66.768	Sphenodon_punctatus
ENSONIG00000002635	lsg1	100	80.740	ENSSPAG00000005508	lsg1	100	81.048	Stegastes_partitus
ENSONIG00000002635	lsg1	100	63.047	ENSSSCG00000011827	LSG1	100	62.766	Sus_scrofa
ENSONIG00000002635	lsg1	89	62.248	ENSTGUG00000009068	LSG1	100	61.913	Taeniopygia_guttata
ENSONIG00000002635	lsg1	98	75.906	ENSTRUG00000017380	lsg1	100	75.730	Takifugu_rubripes
ENSONIG00000002635	lsg1	98	80.095	ENSTNIG00000015570	lsg1	100	80.431	Tetraodon_nigroviridis
ENSONIG00000002635	lsg1	100	60.212	ENSTTRG00000000559	LSG1	100	58.027	Tursiops_truncatus
ENSONIG00000002635	lsg1	100	63.134	ENSUAMG00000012454	LSG1	100	62.985	Ursus_americanus
ENSONIG00000002635	lsg1	100	63.134	ENSUMAG00000000855	LSG1	100	62.985	Ursus_maritimus
ENSONIG00000002635	lsg1	95	61.189	ENSVPAG00000012400	LSG1	100	60.345	Vicugna_pacos
ENSONIG00000002635	lsg1	95	63.391	ENSVVUG00000008956	LSG1	99	60.704	Vulpes_vulpes
ENSONIG00000002635	lsg1	100	66.514	ENSXETG00000003451	lsg1	100	67.077	Xenopus_tropicalis
ENSONIG00000002635	lsg1	98	82.250	ENSXCOG00000003239	lsg1	100	82.380	Xiphophorus_couchianus
ENSONIG00000002635	lsg1	98	80.989	ENSXMAG00000005536	lsg1	100	80.995	Xiphophorus_maculatus