EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000002816 (Gene tree)
Gene ID: 100712059
Gene Symbol: chd9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 67090 bases
Position: chrGL831133.1:3829277-3896366
Accession: ZDB-GENE-030131-497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000003531	ResIII	PF04851.15	2.1e-06	1	1
ENSONIP00000003530	ResIII	PF04851.15	1e-05	1	1
ENSONIP00000003531	BRK	PF07533.16	4.6e-32	1	2
ENSONIP00000003531	BRK	PF07533.16	4.6e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000003532	-	7275	-	ENSONIP00000003531	2424 (aa)	-	I3J3U1
ENSONIT00000003531	-	7752	-	ENSONIP00000003530	2511 (aa)	-	I3J3U0

Gene Model

Click here to download ENSONIG00000002816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000002816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000002816	chd9	90	55.378	ENSONIG00000016614	chd7	72	65.417
ENSONIG00000002816	chd9	76	66.242	ENSONIG00000000393	chd6	67	66.242
ENSONIG00000002816	chd9	72	62.054	ENSONIG00000015569	chd8	69	62.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000002816	chd9	99	70.016	ENSG00000177200	CHD9	96	71.567	Homo_sapiens
ENSONIG00000002816	chd9	98	91.972	ENSAPOG00000023034	chd9	97	91.650	Acanthochromis_polyacanthus
ENSONIG00000002816	chd9	87	63.073	ENSAMEG00000016232	CHD9	79	72.145	Ailuropoda_melanoleuca
ENSONIG00000002816	chd9	98	90.166	ENSACIG00000004097	chd9	81	90.377	Amphilophus_citrinellus
ENSONIG00000002816	chd9	98	92.219	ENSAOCG00000005487	chd9	98	91.931	Amphiprion_ocellaris
ENSONIG00000002816	chd9	98	92.301	ENSAPEG00000009859	chd9	97	91.979	Amphiprion_percula
ENSONIG00000002816	chd9	98	89.938	ENSATEG00000002748	chd9	83	89.385	Anabas_testudineus
ENSONIG00000002816	chd9	99	70.555	ENSAPLG00000002826	CHD9	61	77.508	Anas_platyrhynchos
ENSONIG00000002816	chd9	87	63.282	ENSACAG00000016150	CHD9	79	71.374	Anolis_carolinensis
ENSONIG00000002816	chd9	87	62.998	ENSANAG00000015630	CHD9	93	69.123	Aotus_nancymaae
ENSONIG00000002816	chd9	100	94.113	ENSACLG00000016899	chd9	83	100.000	Astatotilapia_calliptera
ENSONIG00000002816	chd9	98	77.778	ENSAMXG00000005652	chd9	98	77.369	Astyanax_mexicanus
ENSONIG00000002816	chd9	96	62.790	ENSBTAG00000002287	CHD9	79	71.453	Bos_taurus
ENSONIG00000002816	chd9	87	62.885	ENSCJAG00000001573	CHD9	93	69.474	Callithrix_jacchus
ENSONIG00000002816	chd9	87	63.012	ENSCAFG00000009699	CHD9	79	72.290	Canis_familiaris
ENSONIG00000002816	chd9	87	63.012	ENSCAFG00020002879	CHD9	92	70.175	Canis_lupus_dingo
ENSONIG00000002816	chd9	87	62.595	ENSTSYG00000007693	CHD9	92	70.175	Carlito_syrichta
ENSONIG00000002816	chd9	79	60.594	ENSCAPG00000011604	CHD9	60	62.482	Cavia_aperea
ENSONIG00000002816	chd9	87	59.294	ENSCPOG00000036544	CHD9	79	68.419	Cavia_porcellus
ENSONIG00000002816	chd9	87	63.047	ENSCCAG00000036178	CHD9	93	70.070	Cebus_capucinus
ENSONIG00000002816	chd9	87	63.172	ENSCATG00000036753	CHD9	92	69.550	Cercocebus_atys
ENSONIG00000002816	chd9	87	62.918	ENSCLAG00000007137	CHD9	96	81.043	Chinchilla_lanigera
ENSONIG00000002816	chd9	87	63.177	ENSCSAG00000005311	CHD9	79	71.676	Chlorocebus_sabaeus
ENSONIG00000002816	chd9	65	91.667	ENSCHOG00000003935	CHD9	55	91.623	Choloepus_hoffmanni
ENSONIG00000002816	chd9	88	83.196	ENSCPBG00000012459	CHD9	81	77.852	Chrysemys_picta_bellii
ENSONIG00000002816	chd9	87	63.177	ENSCANG00000030349	CHD9	92	70.175	Colobus_angolensis_palliatus
ENSONIG00000002816	chd9	99	69.668	ENSCGRG00001016150	Chd9	79	71.526	Cricetulus_griseus_chok1gshd
ENSONIG00000002816	chd9	99	69.668	ENSCGRG00000012850	Chd9	94	82.126	Cricetulus_griseus_crigri
ENSONIG00000002816	chd9	98	85.104	ENSCSEG00000009209	chd9	97	83.668	Cynoglossus_semilaevis
ENSONIG00000002816	chd9	96	88.558	ENSCVAG00000016195	chd9	83	86.373	Cyprinodon_variegatus
ENSONIG00000002816	chd9	98	76.958	ENSDARG00000074498	chd9	97	76.454	Danio_rerio
ENSONIG00000002816	chd9	97	70.404	ENSDNOG00000006045	CHD9	94	72.379	Dasypus_novemcinctus
ENSONIG00000002816	chd9	52	78.464	ENSDORG00000008523	-	97	71.725	Dipodomys_ordii
ENSONIG00000002816	chd9	77	92.063	ENSETEG00000009565	CHD9	71	92.063	Echinops_telfairi
ENSONIG00000002816	chd9	95	73.732	ENSEASG00005014832	CHD9	96	78.292	Equus_asinus_asinus
ENSONIG00000002816	chd9	87	63.085	ENSECAG00000011505	CHD9	80	71.825	Equus_caballus
ENSONIG00000002816	chd9	82	86.087	ENSEEUG00000014515	CHD9	67	85.635	Erinaceus_europaeus
ENSONIG00000002816	chd9	98	78.199	ENSELUG00000006031	chd9	97	78.677	Esox_lucius
ENSONIG00000002816	chd9	99	69.976	ENSFCAG00000022534	CHD9	92	70.526	Felis_catus
ENSONIG00000002816	chd9	99	70.772	ENSFALG00000013276	CHD9	96	72.262	Ficedula_albicollis
ENSONIG00000002816	chd9	87	62.517	ENSFDAG00000021037	CHD9	80	71.146	Fukomys_damarensis
ENSONIG00000002816	chd9	96	88.922	ENSFHEG00000006068	chd9	98	86.530	Fundulus_heteroclitus
ENSONIG00000002816	chd9	82	86.789	ENSGMOG00000006040	chd9	84	86.789	Gadus_morhua
ENSONIG00000002816	chd9	95	72.296	ENSGALG00000039178	CHD9	80	72.979	Gallus_gallus
ENSONIG00000002816	chd9	98	87.623	ENSGAFG00000010014	chd9	97	87.951	Gambusia_affinis
ENSONIG00000002816	chd9	99	61.703	ENSGGOG00000014816	CHD9	93	69.825	Gorilla_gorilla
ENSONIG00000002816	chd9	100	94.897	ENSHBUG00000023322	chd9	99	94.897	Haplochromis_burtoni
ENSONIG00000002816	chd9	99	70.250	ENSHGLG00000014938	CHD9	96	80.737	Heterocephalus_glaber_female
ENSONIG00000002816	chd9	98	82.181	ENSHCOG00000000937	chd9	96	84.213	Hippocampus_comes
ENSONIG00000002816	chd9	98	78.128	ENSIPUG00000016448	chd9	97	81.818	Ictalurus_punctatus
ENSONIG00000002816	chd9	87	62.801	ENSSTOG00000022273	CHD9	96	80.975	Ictidomys_tridecemlineatus
ENSONIG00000002816	chd9	52	77.935	ENSJJAG00000015741	-	96	71.682	Jaculus_jaculus
ENSONIG00000002816	chd9	96	90.055	ENSKMAG00000016784	chd9	97	88.501	Kryptolebias_marmoratus
ENSONIG00000002816	chd9	96	89.713	ENSLBEG00000012077	chd9	97	88.274	Labrus_bergylta
ENSONIG00000002816	chd9	98	67.077	ENSLACG00000005557	CHD9	80	67.251	Latimeria_chalumnae
ENSONIG00000002816	chd9	98	76.345	ENSLOCG00000007225	chd9	97	75.934	Lepisosteus_oculatus
ENSONIG00000002816	chd9	87	62.761	ENSLAFG00000015374	CHD9	80	70.985	Loxodonta_africana
ENSONIG00000002816	chd9	95	71.168	ENSMFAG00000041354	CHD9	93	72.098	Macaca_fascicularis
ENSONIG00000002816	chd9	87	63.076	ENSMMUG00000016310	CHD9	92	70.175	Macaca_mulatta
ENSONIG00000002816	chd9	87	63.076	ENSMNEG00000031494	CHD9	81	72.892	Macaca_nemestrina
ENSONIG00000002816	chd9	87	63.221	ENSMLEG00000043219	CHD9	92	70.175	Mandrillus_leucophaeus
ENSONIG00000002816	chd9	98	89.770	ENSMAMG00000003909	chd9	81	89.195	Mastacembelus_armatus
ENSONIG00000002816	chd9	99	97.851	ENSMZEG00005006581	chd9	99	96.400	Maylandia_zebra
ENSONIG00000002816	chd9	99	65.992	ENSMGAG00000004642	CHD9	59	72.854	Meleagris_gallopavo
ENSONIG00000002816	chd9	87	63.205	ENSMICG00000016679	CHD9	92	70.526	Microcebus_murinus
ENSONIG00000002816	chd9	98	84.940	ENSMMOG00000016406	chd9	83	86.394	Mola_mola
ENSONIG00000002816	chd9	88	66.327	ENSMODG00000013142	-	96	77.889	Monodelphis_domestica
ENSONIG00000002816	chd9	98	87.654	ENSMALG00000013306	chd9	82	86.996	Monopterus_albus
ENSONIG00000002816	chd9	96	62.533	MGP_CAROLIEiJ_G0031364	Chd9	80	71.240	Mus_caroli
ENSONIG00000002816	chd9	87	62.634	ENSMUSG00000056608	Chd9	94	81.137	Mus_musculus
ENSONIG00000002816	chd9	87	62.578	MGP_PahariEiJ_G0022964	Chd9	79	69.911	Mus_pahari
ENSONIG00000002816	chd9	87	62.338	MGP_SPRETEiJ_G0032483	Chd9	80	70.865	Mus_spretus
ENSONIG00000002816	chd9	87	63.073	ENSMPUG00000003285	CHD9	79	71.911	Mustela_putorius_furo
ENSONIG00000002816	chd9	87	62.578	ENSMLUG00000004456	CHD9	80	70.372	Myotis_lucifugus
ENSONIG00000002816	chd9	99	98.558	ENSNBRG00000009423	chd9	99	95.631	Neolamprologus_brichardi
ENSONIG00000002816	chd9	87	62.885	ENSNLEG00000001026	CHD9	80	73.271	Nomascus_leucogenys
ENSONIG00000002816	chd9	74	95.489	ENSMEUG00000008222	-	69	89.375	Notamacropus_eugenii
ENSONIG00000002816	chd9	66	95.489	ENSOPRG00000011168	CHD9	66	86.034	Ochotona_princeps
ENSONIG00000002816	chd9	96	62.550	ENSODEG00000004466	CHD9	80	71.459	Octodon_degus
ENSONIG00000002816	chd9	75	73.169	ENSOANG00000013401	CHD9	80	72.300	Ornithorhynchus_anatinus
ENSONIG00000002816	chd9	68	75.582	ENSOCUG00000001016	CHD9	94	71.917	Oryctolagus_cuniculus
ENSONIG00000002816	chd9	96	88.089	ENSORLG00000013810	chd9	95	85.458	Oryzias_latipes
ENSONIG00000002816	chd9	96	84.789	ENSORLG00020020665	chd9	81	83.988	Oryzias_latipes_hni
ENSONIG00000002816	chd9	96	88.136	ENSORLG00015019126	chd9	95	86.851	Oryzias_latipes_hsok
ENSONIG00000002816	chd9	76	79.969	ENSOMEG00000015978	chd9	99	79.782	Oryzias_melastigma
ENSONIG00000002816	chd9	99	69.622	ENSOGAG00000002110	CHD9	80	71.561	Otolemur_garnettii
ENSONIG00000002816	chd9	87	62.661	ENSOARG00000017664	CHD9	80	71.290	Ovis_aries
ENSONIG00000002816	chd9	99	69.112	ENSPPAG00000039388	-	96	70.954	Pan_paniscus
ENSONIG00000002816	chd9	99	70.016	ENSPPRG00000004801	CHD9	92	70.175	Panthera_pardus
ENSONIG00000002816	chd9	99	68.959	ENSPTIG00000021854	CHD9	91	62.105	Panthera_tigris_altaica
ENSONIG00000002816	chd9	87	63.087	ENSPTRG00000008113	CHD9	93	69.825	Pan_troglodytes
ENSONIG00000002816	chd9	99	69.854	ENSPANG00000019307	CHD9	96	71.429	Papio_anubis
ENSONIG00000002816	chd9	97	72.514	ENSPKIG00000025401	-	79	72.143	Paramormyrops_kingsleyae
ENSONIG00000002816	chd9	95	77.982	ENSPKIG00000021876	chd9	97	77.374	Paramormyrops_kingsleyae
ENSONIG00000002816	chd9	76	62.704	ENSPSIG00000008099	CHD9	71	78.734	Pelodiscus_sinensis
ENSONIG00000002816	chd9	96	63.471	ENSPCIG00000017215	CHD9	94	76.236	Phascolarctos_cinereus
ENSONIG00000002816	chd9	98	87.746	ENSPFOG00000015839	chd9	84	86.085	Poecilia_formosa
ENSONIG00000002816	chd9	98	88.281	ENSPLAG00000011118	chd9	97	88.816	Poecilia_latipinna
ENSONIG00000002816	chd9	98	86.341	ENSPMEG00000015106	chd9	81	86.838	Poecilia_mexicana
ENSONIG00000002816	chd9	96	89.992	ENSPREG00000006473	chd9	97	87.823	Poecilia_reticulata
ENSONIG00000002816	chd9	87	62.986	ENSPPYG00000007348	CHD9	80	71.447	Pongo_abelii
ENSONIG00000002816	chd9	80	80.346	ENSPCAG00000007564	CHD9	68	82.193	Procavia_capensis
ENSONIG00000002816	chd9	87	61.387	ENSPCOG00000028433	CHD9	92	69.474	Propithecus_coquereli
ENSONIG00000002816	chd9	96	72.840	ENSPVAG00000015617	CHD9	77	74.426	Pteropus_vampyrus
ENSONIG00000002816	chd9	99	97.891	ENSPNYG00000010947	chd9	99	96.400	Pundamilia_nyererei
ENSONIG00000002816	chd9	98	78.785	ENSPNAG00000024141	chd9	98	77.566	Pygocentrus_nattereri
ENSONIG00000002816	chd9	87	60.381	ENSRNOG00000049302	Chd9	75	81.332	Rattus_norvegicus
ENSONIG00000002816	chd9	99	69.854	ENSRBIG00000035553	CHD9	96	71.429	Rhinopithecus_bieti
ENSONIG00000002816	chd9	98	70.651	ENSRROG00000033278	CHD9	97	71.399	Rhinopithecus_roxellana
ENSONIG00000002816	chd9	99	69.711	ENSSBOG00000030240	CHD9	93	69.474	Saimiri_boliviensis_boliviensis
ENSONIG00000002816	chd9	99	70.224	ENSSHAG00000002719	CHD9	80	71.701	Sarcophilus_harrisii
ENSONIG00000002816	chd9	97	77.950	ENSSFOG00015020209	chd9	98	76.850	Scleropages_formosus
ENSONIG00000002816	chd9	98	73.868	ENSSFOG00015001327	chd9	95	74.487	Scleropages_formosus
ENSONIG00000002816	chd9	96	91.028	ENSSMAG00000008953	chd9	97	89.413	Scophthalmus_maximus
ENSONIG00000002816	chd9	98	90.797	ENSSDUG00000006139	chd9	97	90.879	Seriola_dumerili
ENSONIG00000002816	chd9	98	91.376	ENSSLDG00000017818	chd9	97	91.458	Seriola_lalandi_dorsalis
ENSONIG00000002816	chd9	98	92.146	ENSSPAG00000021649	chd9	97	92.026	Stegastes_partitus
ENSONIG00000002816	chd9	94	68.170	ENSTGUG00000007476	CHD9	80	74.138	Taeniopygia_guttata
ENSONIG00000002816	chd9	98	84.948	ENSTRUG00000009125	chd9	82	85.720	Takifugu_rubripes
ENSONIG00000002816	chd9	69	85.377	ENSTNIG00000003825	chd9	84	99.408	Tetraodon_nigroviridis
ENSONIG00000002816	chd9	64	94.915	ENSTBEG00000016052	-	68	94.915	Tupaia_belangeri
ENSONIG00000002816	chd9	88	71.041	ENSTTRG00000012674	CHD9	72	71.950	Tursiops_truncatus
ENSONIG00000002816	chd9	78	86.416	ENSUMAG00000004043	CHD9	95	86.416	Ursus_maritimus
ENSONIG00000002816	chd9	84	76.100	ENSVPAG00000001374	CHD9	77	70.923	Vicugna_pacos
ENSONIG00000002816	chd9	87	62.968	ENSVVUG00000019435	CHD9	79	72.248	Vulpes_vulpes
ENSONIG00000002816	chd9	98	67.918	ENSXETG00000000349	chd9	96	65.531	Xenopus_tropicalis
ENSONIG00000002816	chd9	98	87.603	ENSXCOG00000012997	chd9	97	88.097	Xiphophorus_couchianus
ENSONIG00000002816	chd9	98	88.365	ENSXMAG00000016192	chd9	99	88.642	Xiphophorus_maculatus