EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000002831 (Gene tree)
Gene ID: 100702409
Gene Symbol: sall1a
Alias: -
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Plus strand
Length: 13629 bases
Position: chrGL831133.1:4295497-4309125
Accession: 100702409
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000003550	zf-C2H2	PF00096.26	9.3e-34	1	6
ENSONIP00000003550	zf-C2H2	PF00096.26	9.3e-34	2	6
ENSONIP00000003550	zf-C2H2	PF00096.26	9.3e-34	3	6
ENSONIP00000003550	zf-C2H2	PF00096.26	9.3e-34	4	6
ENSONIP00000003550	zf-C2H2	PF00096.26	9.3e-34	5	6
ENSONIP00000003550	zf-C2H2	PF00096.26	9.3e-34	6	6
ENSONIP00000003549	zf-C2H2	PF00096.26	4.2e-31	1	5
ENSONIP00000003549	zf-C2H2	PF00096.26	4.2e-31	2	5
ENSONIP00000003549	zf-C2H2	PF00096.26	4.2e-31	3	5
ENSONIP00000003549	zf-C2H2	PF00096.26	4.2e-31	4	5
ENSONIP00000003549	zf-C2H2	PF00096.26	4.2e-31	5	5
ENSONIP00000003550	zf-met	PF12874.7	1.4e-22	1	5
ENSONIP00000003550	zf-met	PF12874.7	1.4e-22	2	5
ENSONIP00000003550	zf-met	PF12874.7	1.4e-22	3	5
ENSONIP00000003550	zf-met	PF12874.7	1.4e-22	4	5
ENSONIP00000003550	zf-met	PF12874.7	1.4e-22	5	5
ENSONIP00000003549	zf-met	PF12874.7	1.9e-21	1	5
ENSONIP00000003549	zf-met	PF12874.7	1.9e-21	2	5
ENSONIP00000003549	zf-met	PF12874.7	1.9e-21	3	5
ENSONIP00000003549	zf-met	PF12874.7	1.9e-21	4	5
ENSONIP00000003549	zf-met	PF12874.7	1.9e-21	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000003551	-	3918	-	ENSONIP00000003550	1305 (aa)	XP_003437589	I3J3W0
ENSONIT00000003550	-	8404	-	ENSONIP00000003549	1171 (aa)	-	I3J3V9

Gene Model

Click here to download ENSONIG00000002831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000002831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000002831	sall1a	62	36.047	ENSONIG00000015019	-	95	36.047
ENSONIG00000002831	sall1a	50	52.381	ENSONIG00000007298	znf236	74	51.020
ENSONIG00000002831	sall1a	62	49.091	ENSONIG00000003373	-	100	49.091
ENSONIG00000002831	sall1a	66	61.538	ENSONIG00000007305	sall3a	90	61.538
ENSONIG00000002831	sall1a	62	46.667	ENSONIG00000007088	-	99	46.667
ENSONIG00000002831	sall1a	62	37.736	ENSONIG00000008273	-	98	46.939
ENSONIG00000002831	sall1a	64	41.096	ENSONIG00000008277	-	99	41.096
ENSONIG00000002831	sall1a	100	63.462	ENSONIG00000016557	sall4	100	63.462
ENSONIG00000002831	sall1a	62	38.571	ENSONIG00000003564	-	94	38.571
ENSONIG00000002831	sall1a	62	39.759	ENSONIG00000015553	-	100	39.759
ENSONIG00000002831	sall1a	55	55.556	ENSONIG00000016416	-	89	55.556
ENSONIG00000002831	sall1a	57	49.091	ENSONIG00000020719	-	93	50.000
ENSONIG00000002831	sall1a	61	40.698	ENSONIG00000006274	-	98	40.698
ENSONIG00000002831	sall1a	51	49.123	ENSONIG00000001498	-	99	49.123
ENSONIG00000002831	sall1a	62	50.980	ENSONIG00000017799	-	96	50.980
ENSONIG00000002831	sall1a	62	58.333	ENSONIG00000007812	-	97	58.333
ENSONIG00000002831	sall1a	56	65.385	ENSONIG00000013791	sall3b	81	80.952
ENSONIG00000002831	sall1a	56	47.273	ENSONIG00000007397	-	99	47.273
ENSONIG00000002831	sall1a	62	52.941	ENSONIG00000013434	-	97	52.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000002831	sall1a	99	68.287	ENSG00000103449	SALL1	100	68.586	Homo_sapiens
ENSONIG00000002831	sall1a	100	94.415	ENSAPOG00000022764	sall1a	100	94.415	Acanthochromis_polyacanthus
ENSONIG00000002831	sall1a	99	67.067	ENSAMEG00000006817	SALL1	100	67.492	Ailuropoda_melanoleuca
ENSONIG00000002831	sall1a	100	97.088	ENSACIG00000004231	sall1a	100	97.088	Amphilophus_citrinellus
ENSONIG00000002831	sall1a	100	94.721	ENSAOCG00000002800	sall1a	100	94.721	Amphiprion_ocellaris
ENSONIG00000002831	sall1a	100	94.415	ENSAPEG00000010179	sall1a	100	94.415	Amphiprion_percula
ENSONIG00000002831	sall1a	99	92.266	ENSATEG00000003006	sall1a	100	91.908	Anabas_testudineus
ENSONIG00000002831	sall1a	100	69.098	ENSAPLG00000003356	SALL1	100	69.375	Anas_platyrhynchos
ENSONIG00000002831	sall1a	99	67.475	ENSACAG00000014399	SALL1	97	67.375	Anolis_carolinensis
ENSONIG00000002831	sall1a	99	68.165	ENSANAG00000027238	SALL1	100	68.736	Aotus_nancymaae
ENSONIG00000002831	sall1a	100	98.927	ENSACLG00000017148	sall1a	100	98.927	Astatotilapia_calliptera
ENSONIG00000002831	sall1a	99	61.538	ENSAMXG00000017702	sall1b	90	61.538	Astyanax_mexicanus
ENSONIG00000002831	sall1a	100	80.259	ENSAMXG00000018599	sall1a	100	80.716	Astyanax_mexicanus
ENSONIG00000002831	sall1a	100	67.515	ENSBTAG00000008544	SALL1	100	67.967	Bos_taurus
ENSONIG00000002831	sall1a	99	68.464	ENSCJAG00000001740	SALL1	100	69.035	Callithrix_jacchus
ENSONIG00000002831	sall1a	99	67.214	ENSCAFG00000009755	SALL1	100	68.141	Canis_familiaris
ENSONIG00000002831	sall1a	99	67.214	ENSCAFG00020002842	SALL1	100	68.141	Canis_lupus_dingo
ENSONIG00000002831	sall1a	100	67.491	ENSCHIG00000026074	SALL1	100	67.916	Capra_hircus
ENSONIG00000002831	sall1a	99	68.769	ENSTSYG00000029464	SALL1	100	68.488	Carlito_syrichta
ENSONIG00000002831	sall1a	98	68.043	ENSCPOG00000006564	SALL1	100	68.015	Cavia_porcellus
ENSONIG00000002831	sall1a	99	67.029	ENSCCAG00000001639	SALL1	100	66.941	Cebus_capucinus
ENSONIG00000002831	sall1a	99	68.036	ENSCATG00000004982	SALL1	100	68.960	Cercocebus_atys
ENSONIG00000002831	sall1a	99	67.943	ENSCLAG00000006380	SALL1	100	68.042	Chinchilla_lanigera
ENSONIG00000002831	sall1a	99	67.438	ENSCSAG00000005319	SALL1	100	68.212	Chlorocebus_sabaeus
ENSONIG00000002831	sall1a	76	66.402	ENSCHOG00000000800	-	69	66.733	Choloepus_hoffmanni
ENSONIG00000002831	sall1a	100	68.769	ENSCPBG00000015924	SALL1	100	69.121	Chrysemys_picta_bellii
ENSONIG00000002831	sall1a	99	68.464	ENSCANG00000036664	SALL1	100	69.064	Colobus_angolensis_palliatus
ENSONIG00000002831	sall1a	99	66.692	ENSCGRG00001023314	-	100	67.166	Cricetulus_griseus_chok1gshd
ENSONIG00000002831	sall1a	98	66.641	ENSCGRG00000009496	Sall1	100	67.125	Cricetulus_griseus_crigri
ENSONIG00000002831	sall1a	99	90.076	ENSCSEG00000009349	sall1a	99	90.076	Cynoglossus_semilaevis
ENSONIG00000002831	sall1a	99	90.800	ENSCVAG00000020513	sall1a	99	90.800	Cyprinodon_variegatus
ENSONIG00000002831	sall1a	100	78.995	ENSDARG00000074319	sall1a	100	78.615	Danio_rerio
ENSONIG00000002831	sall1a	99	63.462	ENSDARG00000075891	sall1b	91	63.462	Danio_rerio
ENSONIG00000002831	sall1a	99	68.441	ENSDNOG00000016413	SALL1	100	68.291	Dasypus_novemcinctus
ENSONIG00000002831	sall1a	98	67.890	ENSETEG00000015150	SALL1	100	67.786	Echinops_telfairi
ENSONIG00000002831	sall1a	62	61.538	ENSEBUG00000008798	SALL1	61	61.538	Eptatretus_burgeri
ENSONIG00000002831	sall1a	99	67.788	ENSEASG00005014602	SALL1	100	68.114	Equus_asinus_asinus
ENSONIG00000002831	sall1a	99	66.667	ENSECAG00000011334	SALL1	99	67.170	Equus_caballus
ENSONIG00000002831	sall1a	98	66.995	ENSEEUG00000002014	SALL1	100	68.119	Erinaceus_europaeus
ENSONIG00000002831	sall1a	99	59.615	ENSELUG00000017774	-	100	54.545	Esox_lucius
ENSONIG00000002831	sall1a	100	77.283	ENSELUG00000006159	sall1a	100	77.426	Esox_lucius
ENSONIG00000002831	sall1a	99	66.816	ENSFCAG00000024654	SALL1	100	67.311	Felis_catus
ENSONIG00000002831	sall1a	100	69.375	ENSFALG00000000074	SALL1	100	69.428	Ficedula_albicollis
ENSONIG00000002831	sall1a	100	91.660	ENSFHEG00000012579	sall1a	100	91.660	Fundulus_heteroclitus
ENSONIG00000002831	sall1a	74	63.415	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSONIG00000002831	sall1a	96	48.611	ENSGMOG00000013383	-	63	61.538	Gadus_morhua
ENSONIG00000002831	sall1a	100	83.918	ENSGMOG00000006103	sall1a	100	83.918	Gadus_morhua
ENSONIG00000002831	sall1a	100	69.300	ENSGALG00000039238	SALL1	100	69.202	Gallus_gallus
ENSONIG00000002831	sall1a	100	92.131	ENSGAFG00000009964	sall1a	100	92.131	Gambusia_affinis
ENSONIG00000002831	sall1a	99	90.046	ENSGACG00000016702	sall1a	99	90.046	Gasterosteus_aculeatus
ENSONIG00000002831	sall1a	100	68.694	ENSGAGG00000013979	SALL1	100	69.046	Gopherus_agassizii
ENSONIG00000002831	sall1a	99	68.212	ENSGGOG00000000663	SALL1	100	68.512	Gorilla_gorilla
ENSONIG00000002831	sall1a	100	98.851	ENSHBUG00000022005	sall1a	100	98.851	Haplochromis_burtoni
ENSONIG00000002831	sall1a	99	68.370	ENSHGLG00000004288	-	100	68.492	Heterocephalus_glaber_female
ENSONIG00000002831	sall1a	99	68.370	ENSHGLG00100017496	SALL1	100	68.492	Heterocephalus_glaber_male
ENSONIG00000002831	sall1a	100	84.545	ENSHCOG00000000974	sall1a	100	84.242	Hippocampus_comes
ENSONIG00000002831	sall1a	100	79.802	ENSIPUG00000016265	SALL1	100	79.100	Ictalurus_punctatus
ENSONIG00000002831	sall1a	99	56.140	ENSIPUG00000022928	sall1b	99	49.848	Ictalurus_punctatus
ENSONIG00000002831	sall1a	99	67.926	ENSSTOG00000020885	SALL1	100	68.499	Ictidomys_tridecemlineatus
ENSONIG00000002831	sall1a	100	92.884	ENSKMAG00000016681	sall1a	100	92.884	Kryptolebias_marmoratus
ENSONIG00000002831	sall1a	98	90.368	ENSLBEG00000012207	sall1a	95	90.368	Labrus_bergylta
ENSONIG00000002831	sall1a	100	68.500	ENSLACG00000003556	SALL1	100	69.103	Latimeria_chalumnae
ENSONIG00000002831	sall1a	97	38.640	ENSLACG00000014018	-	88	61.538	Latimeria_chalumnae
ENSONIG00000002831	sall1a	100	77.341	ENSLOCG00000007283	sall1b	100	77.266	Lepisosteus_oculatus
ENSONIG00000002831	sall1a	98	68.092	ENSLAFG00000015251	SALL1	100	68.244	Loxodonta_africana
ENSONIG00000002831	sall1a	99	68.209	ENSMFAG00000003298	SALL1	100	69.035	Macaca_fascicularis
ENSONIG00000002831	sall1a	93	67.900	ENSMMUG00000017200	SALL1	100	68.790	Macaca_mulatta
ENSONIG00000002831	sall1a	93	68.167	ENSMNEG00000034770	SALL1	100	68.629	Macaca_nemestrina
ENSONIG00000002831	sall1a	99	68.409	ENSMLEG00000036406	SALL1	100	69.064	Mandrillus_leucophaeus
ENSONIG00000002831	sall1a	99	93.114	ENSMAMG00000004164	sall1a	99	93.114	Mastacembelus_armatus
ENSONIG00000002831	sall1a	100	98.851	ENSMZEG00005006479	sall1a	100	98.851	Maylandia_zebra
ENSONIG00000002831	sall1a	98	69.018	ENSMGAG00000004704	SALL1	100	68.918	Meleagris_gallopavo
ENSONIG00000002831	sall1a	99	66.667	ENSMAUG00000019093	Sall1	100	66.917	Mesocricetus_auratus
ENSONIG00000002831	sall1a	100	67.892	ENSMICG00000036486	SALL1	100	68.018	Microcebus_murinus
ENSONIG00000002831	sall1a	99	91.564	ENSMMOG00000016400	sall1a	99	91.564	Mola_mola
ENSONIG00000002831	sall1a	99	69.040	ENSMODG00000013114	SALL1	99	69.271	Monodelphis_domestica
ENSONIG00000002831	sall1a	99	92.573	ENSMALG00000013400	sall1a	99	92.573	Monopterus_albus
ENSONIG00000002831	sall1a	99	66.592	MGP_CAROLIEiJ_G0031362	Sall1	100	66.940	Mus_caroli
ENSONIG00000002831	sall1a	99	66.393	ENSMUSG00000031665	Sall1	100	66.916	Mus_musculus
ENSONIG00000002831	sall1a	99	66.518	MGP_PahariEiJ_G0022961	Sall1	100	66.964	Mus_pahari
ENSONIG00000002831	sall1a	99	66.393	MGP_SPRETEiJ_G0032480	Sall1	100	66.916	Mus_spretus
ENSONIG00000002831	sall1a	99	67.173	ENSMPUG00000003265	SALL1	96	67.376	Mustela_putorius_furo
ENSONIG00000002831	sall1a	97	65.899	ENSMLUG00000015541	SALL1	99	66.488	Myotis_lucifugus
ENSONIG00000002831	sall1a	100	98.851	ENSNBRG00000009307	sall1a	100	98.851	Neolamprologus_brichardi
ENSONIG00000002831	sall1a	92	87.179	ENSNLEG00000001008	SALL1	99	80.000	Nomascus_leucogenys
ENSONIG00000002831	sall1a	99	69.023	ENSMEUG00000012206	SALL1	99	68.976	Notamacropus_eugenii
ENSONIG00000002831	sall1a	85	72.353	ENSOPRG00000005645	SALL1	71	72.124	Ochotona_princeps
ENSONIG00000002831	sall1a	99	67.943	ENSODEG00000003685	SALL1	100	68.066	Octodon_degus
ENSONIG00000002831	sall1a	99	61.538	ENSOANG00000013399	SALL1	96	77.049	Ornithorhynchus_anatinus
ENSONIG00000002831	sall1a	100	91.125	ENSORLG00000013827	sall1a	100	91.554	Oryzias_latipes
ENSONIG00000002831	sall1a	100	91.125	ENSORLG00020020570	sall1a	100	91.125	Oryzias_latipes_hni
ENSONIG00000002831	sall1a	100	90.972	ENSORLG00015018830	sall1a	100	91.470	Oryzias_latipes_hsok
ENSONIG00000002831	sall1a	100	90.895	ENSOMEG00000016043	sall1a	100	90.999	Oryzias_melastigma
ENSONIG00000002831	sall1a	99	68.311	ENSOGAG00000027316	SALL1	100	68.488	Otolemur_garnettii
ENSONIG00000002831	sall1a	100	63.670	ENSOARG00000017583	SALL1	100	64.039	Ovis_aries
ENSONIG00000002831	sall1a	98	68.421	ENSPPAG00000035657	SALL1	100	68.726	Pan_paniscus
ENSONIG00000002831	sall1a	99	53.191	ENSPPAG00000035136	-	99	49.925	Pan_paniscus
ENSONIG00000002831	sall1a	100	66.692	ENSPPRG00000023283	SALL1	100	67.311	Panthera_pardus
ENSONIG00000002831	sall1a	96	69.818	ENSPTIG00000013539	-	94	69.835	Panthera_tigris_altaica
ENSONIG00000002831	sall1a	99	50.534	ENSPTRG00000045256	-	99	50.417	Pan_troglodytes
ENSONIG00000002831	sall1a	99	68.240	ENSPTRG00000008108	SALL1	100	68.661	Pan_troglodytes
ENSONIG00000002831	sall1a	99	68.335	ENSPANG00000024176	SALL1	100	68.989	Papio_anubis
ENSONIG00000002831	sall1a	100	71.797	ENSPKIG00000022251	sall1a	100	71.873	Paramormyrops_kingsleyae
ENSONIG00000002831	sall1a	100	70.205	ENSPKIG00000005383	-	100	70.735	Paramormyrops_kingsleyae
ENSONIG00000002831	sall1a	100	69.300	ENSPSIG00000008582	SALL1	100	69.277	Pelodiscus_sinensis
ENSONIG00000002831	sall1a	99	85.045	ENSPMGG00000021788	sall1a	99	85.045	Periophthalmus_magnuspinnatus
ENSONIG00000002831	sall1a	96	63.462	ENSPMAG00000008148	sall1b	73	54.555	Petromyzon_marinus
ENSONIG00000002831	sall1a	99	69.069	ENSPCIG00000017840	SALL1	99	68.976	Phascolarctos_cinereus
ENSONIG00000002831	sall1a	98	92.152	ENSPFOG00000015799	sall1a	96	92.152	Poecilia_formosa
ENSONIG00000002831	sall1a	100	92.437	ENSPLAG00000022539	sall1a	100	92.437	Poecilia_latipinna
ENSONIG00000002831	sall1a	100	92.590	ENSPMEG00000020894	sall1a	100	92.590	Poecilia_mexicana
ENSONIG00000002831	sall1a	100	92.055	ENSPREG00000006802	sall1a	100	92.055	Poecilia_reticulata
ENSONIG00000002831	sall1a	99	67.170	ENSPPYG00000007345	SALL1	96	67.785	Pongo_abelii
ENSONIG00000002831	sall1a	93	70.370	ENSPCAG00000008162	SALL1	93	70.370	Procavia_capensis
ENSONIG00000002831	sall1a	99	67.943	ENSPCOG00000028192	SALL1	100	68.441	Propithecus_coquereli
ENSONIG00000002831	sall1a	66	69.595	ENSPVAG00000015374	SALL1	100	69.792	Pteropus_vampyrus
ENSONIG00000002831	sall1a	100	99.004	ENSPNYG00000010865	sall1a	100	99.004	Pundamilia_nyererei
ENSONIG00000002831	sall1a	100	78.827	ENSPNAG00000023644	sall1a	100	79.284	Pygocentrus_nattereri
ENSONIG00000002831	sall1a	99	61.538	ENSPNAG00000007442	sall1b	99	53.453	Pygocentrus_nattereri
ENSONIG00000002831	sall1a	99	66.942	ENSRNOG00000013907	Sall1	100	66.942	Rattus_norvegicus
ENSONIG00000002831	sall1a	93	68.094	ENSRBIG00000015707	SALL1	100	68.629	Rhinopithecus_bieti
ENSONIG00000002831	sall1a	97	68.615	ENSRROG00000035777	SALL1	100	68.629	Rhinopithecus_roxellana
ENSONIG00000002831	sall1a	99	68.338	ENSSBOG00000032186	SALL1	100	68.960	Saimiri_boliviensis_boliviensis
ENSONIG00000002831	sall1a	99	68.797	ENSSHAG00000009477	SALL1	99	68.623	Sarcophilus_harrisii
ENSONIG00000002831	sall1a	98	71.824	ENSSFOG00015001590	sall1a	99	71.957	Scleropages_formosus
ENSONIG00000002831	sall1a	100	73.036	ENSSFOG00015020020	sall1a	100	72.961	Scleropages_formosus
ENSONIG00000002831	sall1a	99	92.726	ENSSMAG00000009160	sall1a	99	92.726	Scophthalmus_maximus
ENSONIG00000002831	sall1a	99	94.410	ENSSDUG00000006507	sall1a	99	94.410	Seriola_dumerili
ENSONIG00000002831	sall1a	84	61.702	ENSSDUG00000000748	sall1b	99	57.778	Seriola_dumerili
ENSONIG00000002831	sall1a	99	94.410	ENSSLDG00000017721	sall1a	99	94.410	Seriola_lalandi_dorsalis
ENSONIG00000002831	sall1a	60	71.277	ENSSLDG00000014465	-	80	88.235	Seriola_lalandi_dorsalis
ENSONIG00000002831	sall1a	97	67.177	ENSSARG00000000661	SALL1	99	67.636	Sorex_araneus
ENSONIG00000002831	sall1a	100	68.896	ENSSPUG00000000156	SALL1	100	69.572	Sphenodon_punctatus
ENSONIG00000002831	sall1a	100	94.572	ENSSPAG00000021615	sall1a	100	94.572	Stegastes_partitus
ENSONIG00000002831	sall1a	99	66.815	ENSSSCG00000002836	SALL1	100	67.115	Sus_scrofa
ENSONIG00000002831	sall1a	100	69.150	ENSTGUG00000007514	SALL1	100	69.051	Taeniopygia_guttata
ENSONIG00000002831	sall1a	99	87.296	ENSTRUG00000008950	sall1a	100	87.678	Takifugu_rubripes
ENSONIG00000002831	sall1a	99	85.739	ENSTNIG00000004257	sall1a	100	86.227	Tetraodon_nigroviridis
ENSONIG00000002831	sall1a	62	76.712	ENSTBEG00000002119	-	53	76.712	Tupaia_belangeri
ENSONIG00000002831	sall1a	99	66.190	ENSUAMG00000023379	-	92	66.443	Ursus_americanus
ENSONIG00000002831	sall1a	99	66.303	ENSVVUG00000019383	-	99	67.030	Vulpes_vulpes
ENSONIG00000002831	sall1a	99	61.538	ENSXETG00000017176	sall2	80	61.538	Xenopus_tropicalis
ENSONIG00000002831	sall1a	100	65.689	ENSXETG00000018417	sall1	100	65.762	Xenopus_tropicalis
ENSONIG00000002831	sall1a	100	92.284	ENSXMAG00000016273	sall1a	100	92.284	Xiphophorus_maculatus