EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSONIG00000003183 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: -
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Oreochromis_niloticus
Status: putative
Strand: Minus strand
Length: 17939 bases
Position: chrGL831140.1:9422124-9440062
Accession: ZDB-GENE-040426-892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSONIP00000003991	ResIII	PF04851.15	1.8e-11	1	1
ENSONIP00000003990	ResIII	PF04851.15	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSONIT00000003991	-	3045	-	ENSONIP00000003990	1014 (aa)	-	I3J550
ENSONIT00000003992	-	3077	-	ENSONIP00000003991	984 (aa)	-	I3J551

Gene Model

Click here to download ENSONIG00000003183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSONIG00000003183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSONIG00000003183	chd1l	55	43.455	ENSONIG00000009993	smarca5	52	43.352
ENSONIG00000003183	chd1l	50	45.935	ENSONIG00000013166	hells	60	45.935

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSONIG00000003183	chd1l	87	64.761	ENSG00000131778	CHD1L	99	64.563	Homo_sapiens
ENSONIG00000003183	chd1l	97	87.172	ENSAPOG00000001539	chd1l	99	89.261	Acanthochromis_polyacanthus
ENSONIG00000003183	chd1l	89	64.806	ENSAMEG00000017063	CHD1L	97	64.237	Ailuropoda_melanoleuca
ENSONIG00000003183	chd1l	88	91.055	ENSACIG00000001164	chd1l	99	91.170	Amphilophus_citrinellus
ENSONIG00000003183	chd1l	100	86.457	ENSAOCG00000014510	chd1l	100	86.555	Amphiprion_ocellaris
ENSONIG00000003183	chd1l	88	85.369	ENSAPEG00000017573	chd1l	95	85.484	Amphiprion_percula
ENSONIG00000003183	chd1l	88	86.474	ENSAPEG00000017450	chd1l	95	86.243	Amphiprion_percula
ENSONIG00000003183	chd1l	100	84.976	ENSATEG00000013058	chd1l	100	84.976	Anabas_testudineus
ENSONIG00000003183	chd1l	86	64.588	ENSAPLG00000009976	CHD1L	95	63.468	Anas_platyrhynchos
ENSONIG00000003183	chd1l	87	62.571	ENSACAG00000017686	CHD1L	98	61.633	Anolis_carolinensis
ENSONIG00000003183	chd1l	87	64.720	ENSANAG00000024347	CHD1L	97	63.791	Aotus_nancymaae
ENSONIG00000003183	chd1l	99	97.660	ENSACLG00000019304	chd1l	99	97.660	Astatotilapia_calliptera
ENSONIG00000003183	chd1l	100	61.214	ENSAMXG00000012367	chd1l	100	61.117	Astyanax_mexicanus
ENSONIG00000003183	chd1l	88	65.661	ENSBTAG00000020831	CHD1L	97	64.773	Bos_taurus
ENSONIG00000003183	chd1l	87	64.311	ENSCJAG00000002406	CHD1L	97	63.440	Callithrix_jacchus
ENSONIG00000003183	chd1l	90	61.712	ENSCAFG00000010944	CHD1L	98	61.149	Canis_familiaris
ENSONIG00000003183	chd1l	90	63.739	ENSCAFG00020020121	CHD1L	99	63.401	Canis_lupus_dingo
ENSONIG00000003183	chd1l	89	65.188	ENSCHIG00000013871	CHD1L	98	64.659	Capra_hircus
ENSONIG00000003183	chd1l	85	65.517	ENSTSYG00000003005	CHD1L	99	64.419	Carlito_syrichta
ENSONIG00000003183	chd1l	87	62.572	ENSCPOG00000009000	CHD1L	97	61.155	Cavia_porcellus
ENSONIG00000003183	chd1l	87	62.341	ENSCCAG00000036079	CHD1L	97	61.635	Cebus_capucinus
ENSONIG00000003183	chd1l	87	64.774	ENSCATG00000031044	CHD1L	97	63.968	Cercocebus_atys
ENSONIG00000003183	chd1l	87	65.041	ENSCLAG00000000880	CHD1L	97	64.018	Chinchilla_lanigera
ENSONIG00000003183	chd1l	87	65.006	ENSCSAG00000018386	CHD1L	97	64.082	Chlorocebus_sabaeus
ENSONIG00000003183	chd1l	87	66.278	ENSCPBG00000002600	CHD1L	97	65.442	Chrysemys_picta_bellii
ENSONIG00000003183	chd1l	87	63.847	ENSCANG00000020239	CHD1L	97	63.056	Colobus_angolensis_palliatus
ENSONIG00000003183	chd1l	88	64.787	ENSCGRG00001021624	Chd1l	98	63.864	Cricetulus_griseus_chok1gshd
ENSONIG00000003183	chd1l	84	65.868	ENSCGRG00000007554	Chd1l	100	64.369	Cricetulus_griseus_crigri
ENSONIG00000003183	chd1l	97	80.582	ENSCVAG00000002595	chd1l	98	80.561	Cyprinodon_variegatus
ENSONIG00000003183	chd1l	99	69.201	ENSDARG00000015471	chd1l	99	69.700	Danio_rerio
ENSONIG00000003183	chd1l	89	64.351	ENSDNOG00000019504	CHD1L	97	64.351	Dasypus_novemcinctus
ENSONIG00000003183	chd1l	89	63.026	ENSDORG00000013555	Chd1l	97	64.050	Dipodomys_ordii
ENSONIG00000003183	chd1l	81	62.129	ENSETEG00000008445	CHD1L	88	61.955	Echinops_telfairi
ENSONIG00000003183	chd1l	69	51.064	ENSEBUG00000005791	chd1l	92	51.920	Eptatretus_burgeri
ENSONIG00000003183	chd1l	89	64.505	ENSEASG00005007364	CHD1L	100	64.614	Equus_asinus_asinus
ENSONIG00000003183	chd1l	89	64.164	ENSECAG00000008915	CHD1L	100	64.493	Equus_caballus
ENSONIG00000003183	chd1l	100	60.828	ENSELUG00000016844	chd1l	99	61.116	Esox_lucius
ENSONIG00000003183	chd1l	87	64.994	ENSFCAG00000007777	CHD1L	97	63.605	Felis_catus
ENSONIG00000003183	chd1l	88	61.416	ENSFALG00000006087	CHD1L	96	61.872	Ficedula_albicollis
ENSONIG00000003183	chd1l	85	64.769	ENSFDAG00000012431	CHD1L	99	64.037	Fukomys_damarensis
ENSONIG00000003183	chd1l	99	81.009	ENSFHEG00000012420	chd1l	100	81.009	Fundulus_heteroclitus
ENSONIG00000003183	chd1l	88	63.616	ENSGALG00000015038	CHD1L	96	63.387	Gallus_gallus
ENSONIG00000003183	chd1l	99	80.156	ENSGAFG00000018198	chd1l	100	80.739	Gambusia_affinis
ENSONIG00000003183	chd1l	52	85.127	ENSGACG00000014042	chd1l	98	85.127	Gasterosteus_aculeatus
ENSONIG00000003183	chd1l	86	66.432	ENSGAGG00000014432	CHD1L	96	65.845	Gopherus_agassizii
ENSONIG00000003183	chd1l	88	63.188	ENSGGOG00000001067	CHD1L	98	62.641	Gorilla_gorilla
ENSONIG00000003183	chd1l	99	97.660	ENSHBUG00000007464	chd1l	99	97.660	Haplochromis_burtoni
ENSONIG00000003183	chd1l	87	63.268	ENSHGLG00000008933	CHD1L	98	62.429	Heterocephalus_glaber_female
ENSONIG00000003183	chd1l	85	62.782	ENSHGLG00100007155	CHD1L	99	61.298	Heterocephalus_glaber_male
ENSONIG00000003183	chd1l	88	76.782	ENSHCOG00000012787	chd1l	94	77.011	Hippocampus_comes
ENSONIG00000003183	chd1l	100	64.734	ENSIPUG00000022617	chd1l	100	64.802	Ictalurus_punctatus
ENSONIG00000003183	chd1l	89	58.730	ENSSTOG00000007032	CHD1L	98	58.617	Ictidomys_tridecemlineatus
ENSONIG00000003183	chd1l	100	82.958	ENSKMAG00000014358	chd1l	100	82.958	Kryptolebias_marmoratus
ENSONIG00000003183	chd1l	100	80.929	ENSLBEG00000023845	chd1l	100	81.123	Labrus_bergylta
ENSONIG00000003183	chd1l	99	58.570	ENSLACG00000006262	CHD1L	99	59.042	Latimeria_chalumnae
ENSONIG00000003183	chd1l	99	69.745	ENSLOCG00000010574	chd1l	99	70.020	Lepisosteus_oculatus
ENSONIG00000003183	chd1l	87	64.843	ENSLAFG00000018136	CHD1L	100	64.393	Loxodonta_africana
ENSONIG00000003183	chd1l	86	64.421	ENSMFAG00000043562	CHD1L	99	64.372	Macaca_fascicularis
ENSONIG00000003183	chd1l	87	64.890	ENSMMUG00000009024	CHD1L	97	64.082	Macaca_mulatta
ENSONIG00000003183	chd1l	87	64.890	ENSMNEG00000039905	CHD1L	97	64.082	Macaca_nemestrina
ENSONIG00000003183	chd1l	87	64.890	ENSMLEG00000030900	CHD1L	97	64.082	Mandrillus_leucophaeus
ENSONIG00000003183	chd1l	100	83.220	ENSMAMG00000012822	chd1l	100	84.008	Mastacembelus_armatus
ENSONIG00000003183	chd1l	99	97.660	ENSMZEG00005020830	chd1l	99	97.660	Maylandia_zebra
ENSONIG00000003183	chd1l	87	63.647	ENSMGAG00000014304	CHD1L	99	63.763	Meleagris_gallopavo
ENSONIG00000003183	chd1l	87	65.933	ENSMICG00000002497	CHD1L	96	65.108	Microcebus_murinus
ENSONIG00000003183	chd1l	89	65.000	ENSMOCG00000006305	Chd1l	98	63.964	Microtus_ochrogaster
ENSONIG00000003183	chd1l	88	76.201	ENSMMOG00000005964	chd1l	91	76.316	Mola_mola
ENSONIG00000003183	chd1l	90	62.835	ENSMODG00000018717	CHD1L	99	62.723	Monodelphis_domestica
ENSONIG00000003183	chd1l	99	85.196	ENSMALG00000014675	chd1l	99	85.392	Monopterus_albus
ENSONIG00000003183	chd1l	89	65.143	MGP_CAROLIEiJ_G0025401	Chd1l	98	65.143	Mus_caroli
ENSONIG00000003183	chd1l	87	65.318	ENSMUSG00000028089	Chd1l	98	64.512	Mus_musculus
ENSONIG00000003183	chd1l	89	65.188	MGP_PahariEiJ_G0026845	Chd1l	98	65.000	Mus_pahari
ENSONIG00000003183	chd1l	87	65.389	MGP_SPRETEiJ_G0026347	Chd1l	98	64.874	Mus_spretus
ENSONIG00000003183	chd1l	89	64.626	ENSMPUG00000000615	CHD1L	97	64.326	Mustela_putorius_furo
ENSONIG00000003183	chd1l	88	63.026	ENSMLUG00000007573	CHD1L	96	62.275	Myotis_lucifugus
ENSONIG00000003183	chd1l	88	60.984	ENSNGAG00000000908	Chd1l	99	60.755	Nannospalax_galili
ENSONIG00000003183	chd1l	88	92.652	ENSNBRG00000006021	chd1l	95	92.652	Neolamprologus_brichardi
ENSONIG00000003183	chd1l	87	64.261	ENSNLEG00000000179	CHD1L	97	63.056	Nomascus_leucogenys
ENSONIG00000003183	chd1l	86	55.607	ENSOPRG00000006973	CHD1L	91	65.882	Ochotona_princeps
ENSONIG00000003183	chd1l	87	60.784	ENSODEG00000002494	CHD1L	97	59.389	Octodon_degus
ENSONIG00000003183	chd1l	78	63.496	ENSOANG00000003068	CHD1L	92	63.368	Ornithorhynchus_anatinus
ENSONIG00000003183	chd1l	87	62.288	ENSOCUG00000009336	CHD1L	96	61.530	Oryctolagus_cuniculus
ENSONIG00000003183	chd1l	88	80.023	ENSORLG00000003673	chd1l	95	79.792	Oryzias_latipes
ENSONIG00000003183	chd1l	97	78.586	ENSORLG00020005123	chd1l	99	80.000	Oryzias_latipes_hni
ENSONIG00000003183	chd1l	97	78.415	ENSORLG00015001680	chd1l	99	78.953	Oryzias_latipes_hsok
ENSONIG00000003183	chd1l	80	78.571	ENSOMEG00000006109	chd1l	96	78.571	Oryzias_melastigma
ENSONIG00000003183	chd1l	89	64.000	ENSOGAG00000008775	CHD1L	97	63.543	Otolemur_garnettii
ENSONIG00000003183	chd1l	91	64.318	ENSOARG00000020547	CHD1L	99	64.931	Ovis_aries
ENSONIG00000003183	chd1l	86	64.042	ENSPPAG00000039193	CHD1L	99	64.130	Pan_paniscus
ENSONIG00000003183	chd1l	87	65.157	ENSPPRG00000010258	CHD1L	97	64.059	Panthera_pardus
ENSONIG00000003183	chd1l	87	64.644	ENSPTRG00000001220	CHD1L	96	63.876	Pan_troglodytes
ENSONIG00000003183	chd1l	87	64.953	ENSPANG00000009170	CHD1L	97	63.968	Papio_anubis
ENSONIG00000003183	chd1l	99	69.882	ENSPKIG00000022166	chd1l	97	72.289	Paramormyrops_kingsleyae
ENSONIG00000003183	chd1l	87	65.578	ENSPSIG00000012595	CHD1L	96	64.560	Pelodiscus_sinensis
ENSONIG00000003183	chd1l	87	63.857	ENSPEMG00000013528	Chd1l	98	62.641	Peromyscus_maniculatus_bairdii
ENSONIG00000003183	chd1l	84	63.702	ENSPCIG00000030409	CHD1L	99	63.942	Phascolarctos_cinereus
ENSONIG00000003183	chd1l	99	80.214	ENSPFOG00000015948	chd1l	100	80.409	Poecilia_formosa
ENSONIG00000003183	chd1l	99	80.952	ENSPLAG00000015145	chd1l	100	81.147	Poecilia_latipinna
ENSONIG00000003183	chd1l	96	81.485	ENSPMEG00000008720	chd1l	99	81.742	Poecilia_mexicana
ENSONIG00000003183	chd1l	88	81.007	ENSPREG00000017885	chd1l	98	80.805	Poecilia_reticulata
ENSONIG00000003183	chd1l	88	64.147	ENSPPYG00000000946	CHD1L	98	63.360	Pongo_abelii
ENSONIG00000003183	chd1l	83	58.456	ENSPCAG00000005959	CHD1L	91	58.587	Procavia_capensis
ENSONIG00000003183	chd1l	86	61.085	ENSPVAG00000006084	CHD1L	99	61.085	Pteropus_vampyrus
ENSONIG00000003183	chd1l	88	95.982	ENSPNYG00000013001	chd1l	97	95.982	Pundamilia_nyererei
ENSONIG00000003183	chd1l	100	68.786	ENSPNAG00000011881	chd1l	100	69.268	Pygocentrus_nattereri
ENSONIG00000003183	chd1l	89	64.626	ENSRNOG00000017669	Chd1l	98	64.439	Rattus_norvegicus
ENSONIG00000003183	chd1l	87	63.731	ENSRBIG00000041272	CHD1L	97	62.955	Rhinopithecus_bieti
ENSONIG00000003183	chd1l	87	63.753	ENSRROG00000041354	CHD1L	96	63.520	Rhinopithecus_roxellana
ENSONIG00000003183	chd1l	89	62.785	ENSSHAG00000017395	CHD1L	99	62.235	Sarcophilus_harrisii
ENSONIG00000003183	chd1l	96	70.992	ENSSFOG00015003649	chd1l	98	71.609	Scleropages_formosus
ENSONIG00000003183	chd1l	100	80.580	ENSSMAG00000019377	chd1l	100	80.483	Scophthalmus_maximus
ENSONIG00000003183	chd1l	86	84.788	ENSSDUG00000019831	chd1l	95	84.316	Seriola_dumerili
ENSONIG00000003183	chd1l	86	84.706	ENSSLDG00000012714	chd1l	95	84.588	Seriola_lalandi_dorsalis
ENSONIG00000003183	chd1l	88	62.500	ENSSPUG00000016865	CHD1L	98	62.615	Sphenodon_punctatus
ENSONIG00000003183	chd1l	96	87.382	ENSSPAG00000017653	chd1l	100	87.802	Stegastes_partitus
ENSONIG00000003183	chd1l	88	63.279	ENSSSCG00000006701	CHD1L	98	62.429	Sus_scrofa
ENSONIG00000003183	chd1l	87	63.244	ENSTGUG00000013392	-	100	62.443	Taeniopygia_guttata
ENSONIG00000003183	chd1l	86	70.223	ENSTNIG00000004902	chd1l	99	69.860	Tetraodon_nigroviridis
ENSONIG00000003183	chd1l	87	62.150	ENSTTRG00000011711	CHD1L	99	61.682	Tursiops_truncatus
ENSONIG00000003183	chd1l	89	64.920	ENSUAMG00000021991	CHD1L	97	64.465	Ursus_americanus
ENSONIG00000003183	chd1l	89	64.813	ENSUMAG00000009733	CHD1L	96	65.435	Ursus_maritimus
ENSONIG00000003183	chd1l	89	64.310	ENSVVUG00000007316	CHD1L	92	64.982	Vulpes_vulpes
ENSONIG00000003183	chd1l	97	76.500	ENSXCOG00000008336	chd1l	98	76.700	Xiphophorus_couchianus
ENSONIG00000003183	chd1l	99	80.626	ENSXMAG00000015898	chd1l	100	80.822	Xiphophorus_maculatus